RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 PRAMEF22A3QJZ6 481 aa15.1■□□□□ 0.01
RPAIN-214ENST00000574003 BTBD11A6QL63 1104 aa15.1■□□□□ 0.01
RPAIN-214ENST00000574003 GRIN3BO60391 1043 aa15.1■□□□□ 0.01
RPAIN-214ENST00000574003 DPEP1P16444 411 aa15.1■□□□□ 0.01
RPAIN-214ENST00000574003 PIP4K2AP48426 406 aaPredicted RBP15.1■□□□□ 0.01
RPAIN-214ENST00000574003 VSIG10Q8N0Z9 540 aa15.1■□□□□ 0.01
RPAIN-214ENST00000574003 BCL2L12Q9HB09 334 aa15.1■□□□□ 0.01
RPAIN-214ENST00000574003 COL15A1P39059 1388 aa15.1■□□□□ 0.01
RPAIN-214ENST00000574003 HEG1Q9ULI3 1381 aa15.1■□□□□ 0.01
RPAIN-214ENST00000574003 C10orf71Q711Q0 1435 aa15.09■□□□□ 0.01
RPAIN-214ENST00000574003 KIF13BQ9NQT8 1826 aa15.09■□□□□ 0.01
RPAIN-214ENST00000574003 A1BGP04217 495 aa15.09■□□□□ 0.01
RPAIN-214ENST00000574003 MIS18AQ9NYP9 233 aa15.09■□□□□ 0.01
RPAIN-214ENST00000574003 ZNF330Q9Y3S2 320 aaPredicted RBP15.09■□□□□ 0.01
RPAIN-214ENST00000574003 ZPR1O75312 459 aa15.08■□□□□ 0
RPAIN-214ENST00000574003 TM4SF1P30408 202 aa15.08■□□□□ 0
RPAIN-214ENST00000574003 RTF1Q92541 710 aaKnown RBP15.08■□□□□ 0
RPAIN-214ENST00000574003 POLRMTO00411 1230 aaKnown RBP15.07■□□□□ 0
RPAIN-214ENST00000574003 NFIXQ14938 502 aa15.07■□□□□ 0
RPAIN-214ENST00000574003 FMNL2Q96PY5 1086 aa15.07■□□□□ 0
RPAIN-214ENST00000574003 PLEKHF1Q96S99 279 aa15.07■□□□□ 0
RPAIN-214ENST00000574003 THUMPD2Q9BTF0 503 aaKnown RBP15.07■□□□□ 0
RPAIN-214ENST00000574003 NARFQ9UHQ1 456 aa15.07■□□□□ 0
RPAIN-214ENST00000574003 USP16Q9Y5T5 823 aa15.07■□□□□ 0
RPAIN-214ENST00000574003 DLG5Q8TDM6 1919 aa15.07■□□□□ 0
RPAIN-214ENST00000574003 STARD3NLO95772 234 aa15.06■□□□□ 0
RPAIN-214ENST00000574003 CHRNA5P30532 468 aa15.06■□□□□ 0
RPAIN-214ENST00000574003 EIF5P55010 431 aaKnown RBP15.06■□□□□ 0
RPAIN-214ENST00000574003 BICDL1Q6ZP65 573 aa15.06■□□□□ 0
RPAIN-214ENST00000574003 TBC1D2BQ9UPU7 963 aa15.06■□□□□ 0
RPAIN-214ENST00000574003 BCS1LQ9Y276 419 aa15.06■□□□□ 0
RPAIN-214ENST00000574003 KCNA3P22001 575 aa15.05■□□□□ -0
RPAIN-214ENST00000574003 AFDNP55196 1824 aaKnown RBP15.04■□□□□ -0
RPAIN-214ENST00000574003 TGFB2P61812 414 aa15.04■□□□□ -0
RPAIN-214ENST00000574003 RALBP1Q15311 655 aa15.03■□□□□ -0
RPAIN-214ENST00000574003 CCDC24Q8N4L8 307 aa15.03■□□□□ -0
RPAIN-214ENST00000574003 BRCA1P38398 1863 aaKnown RBP15.02■□□□□ -0
RPAIN-214ENST00000574003 HTATSF1O43719 755 aaKnown RBP15.02■□□□□ -0
RPAIN-214ENST00000574003 SERPINB2P05120 415 aa15.02■□□□□ -0
RPAIN-214ENST00000574003 NFE2L2Q16236 605 aa15.02■□□□□ -0
RPAIN-214ENST00000574003 TBC1D9BQ66K14 1250 aa15.02■□□□□ -0
RPAIN-214ENST00000574003 ZNF526Q8TF50 670 aaPredicted RBP15.02■□□□□ -0
RPAIN-214ENST00000574003 TEX13AQ9BXU3 409 aaPredicted RBP15.02■□□□□ -0
RPAIN-214ENST00000574003 ATP10DQ9P241 1426 aa15.01□□□□□ -0.01
RPAIN-214ENST00000574003 CARMIL3Q8ND23 1372 aa15.01□□□□□ -0.01
RPAIN-214ENST00000574003 TAF7Q15545 349 aaPredicted RBP15.01□□□□□ -0.01
RPAIN-214ENST00000574003 CCDC146Q8IYE0 955 aa15.01□□□□□ -0.01
RPAIN-214ENST00000574003 MYBBP1AQ9BQG0 1328 aaKnown RBP15□□□□□ -0.01
RPAIN-214ENST00000574003 A0A087WZG4 1122 aa15□□□□□ -0.01
RPAIN-214ENST00000574003 NBPF26B4DH59 902 aa15□□□□□ -0.01
RPAIN-214ENST00000574003 NEFMP07197 916 aa15□□□□□ -0.01
RPAIN-214ENST00000574003 SNRPA1P09661 255 aaKnown RBP15□□□□□ -0.01
RPAIN-214ENST00000574003 IL6STP40189 918 aaPredicted RBP15□□□□□ -0.01
RPAIN-214ENST00000574003 NBPF10Q6P3W6 841 aaKnown RBP15□□□□□ -0.01
RPAIN-214ENST00000574003 ARHGAP27Q6ZUM4 889 aa15□□□□□ -0.01
RPAIN-214ENST00000574003 NBPF15Q8N660 670 aa15□□□□□ -0.01
RPAIN-214ENST00000574003 RRP7AQ9Y3A4 280 aaKnown RBP15□□□□□ -0.01
RPAIN-214ENST00000574003 MAPK8IP3Q9UPT6 1336 aa14.99□□□□□ -0.01
RPAIN-214ENST00000574003 CAMTA2O94983 1202 aa14.99□□□□□ -0.01
RPAIN-214ENST00000574003 ADCY9O60503 1353 aa14.98□□□□□ -0.01
RPAIN-214ENST00000574003 NRXN2Q9P2S2 1712 aa14.98□□□□□ -0.01
RPAIN-214ENST00000574003 SCN7AQ01118 1682 aa14.98□□□□□ -0.01
RPAIN-214ENST00000574003 DZIP3Q86Y13 1208 aaKnown RBP14.98□□□□□ -0.01
RPAIN-214ENST00000574003 PIM2Q9P1W9 311 aa14.98□□□□□ -0.01
RPAIN-214ENST00000574003 RIPK4P57078 832 aa14.97□□□□□ -0.01
RPAIN-214ENST00000574003 NEUROD2Q15784 382 aa14.97□□□□□ -0.01
RPAIN-214ENST00000574003 DALRD3Q5D0E6 543 aaKnown RBP14.97□□□□□ -0.01
RPAIN-214ENST00000574003 KDM3BQ7LBC6 1761 aa14.97□□□□□ -0.01
RPAIN-214ENST00000574003 NGEFQ8N5V2 710 aa14.96□□□□□ -0.01
RPAIN-214ENST00000574003 ANKRD31Q8N7Z5 1873 aa14.95□□□□□ -0.02
RPAIN-214ENST00000574003 ARFGEF1Q9Y6D6 1849 aa14.95□□□□□ -0.02
RPAIN-214ENST00000574003 GIGYF1O75420 1035 aaPredicted RBP14.95□□□□□ -0.02
RPAIN-214ENST00000574003 TMPOP42166 694 aaKnown RBP14.95□□□□□ -0.02
RPAIN-214ENST00000574003 EIF4A1P60842 406 aaKnown RBP14.95□□□□□ -0.02
RPAIN-214ENST00000574003 PRR5LQ6MZQ0 368 aa14.95□□□□□ -0.02
RPAIN-214ENST00000574003 NPM2Q86SE8 214 aaKnown RBP14.95□□□□□ -0.02
RPAIN-214ENST00000574003 C2CD5Q86YS7 1000 aa14.95□□□□□ -0.02
RPAIN-214ENST00000574003 PRKRIP1Q9H875 184 aaPredicted RBP14.95□□□□□ -0.02
RPAIN-214ENST00000574003 BCORQ6W2J9 1755 aa14.95□□□□□ -0.02
RPAIN-214ENST00000574003 C1QTNF8P60827 252 aa14.94□□□□□ -0.02
RPAIN-214ENST00000574003 PNNQ9H307 717 aaKnown RBP14.94□□□□□ -0.02
RPAIN-214ENST00000574003 ADAMTS8Q9UP79 889 aa14.94□□□□□ -0.02
RPAIN-214ENST00000574003 RASSF7Q02833 373 aa14.93□□□□□ -0.02
RPAIN-214ENST00000574003 HLFQ16534 295 aa14.93□□□□□ -0.02
RPAIN-214ENST00000574003 PNISRQ8TF01 805 aaKnown RBP14.93□□□□□ -0.02
RPAIN-214ENST00000574003 SETDB2Q96T68 719 aa14.93□□□□□ -0.02
RPAIN-214ENST00000574003 GPBP1L1Q9HC44 474 aaPredicted RBP14.93□□□□□ -0.02
RPAIN-214ENST00000574003 FAM177BA6PVY3 158 aa14.92□□□□□ -0.02
RPAIN-214ENST00000574003 WDR43Q15061 677 aaKnown RBP eCLIP14.92□□□□□ -0.02
RPAIN-214ENST00000574003 C9orf131Q5VYM1 1079 aa14.92□□□□□ -0.02
RPAIN-214ENST00000574003 ZNF219Q9P2Y4 722 aaPredicted RBP14.92□□□□□ -0.02
RPAIN-214ENST00000574003 TSPYL4Q9UJ04 414 aa14.92□□□□□ -0.02
RPAIN-214ENST00000574003 LAMB4A4D0S4 1761 aa14.92□□□□□ -0.02
RPAIN-214ENST00000574003 COL11A2P13942 1736 aaPredicted RBP14.92□□□□□ -0.02
RPAIN-214ENST00000574003 MYL6BP14649 208 aa14.91□□□□□ -0.02
RPAIN-214ENST00000574003 TTLL7Q6ZT98 887 aa14.91□□□□□ -0.02
RPAIN-214ENST00000574003 ZNF622Q969S3 477 aaKnown RBP eCLIP14.91□□□□□ -0.02
RPAIN-214ENST00000574003 DLEC1Q9Y238 1755 aa14.9□□□□□ -0.02
RPAIN-214ENST00000574003 SENP3-EIF4A1A0A087X0R7 540 aa14.9□□□□□ -0.02
RPAIN-214ENST00000574003 H0YIN7 160 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms