RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 GNAI3P08754 354 aa19.72■□□□□ 0.75
USP43-204ENST00000573955 USP44Q9H0E7 712 aa19.72■□□□□ 0.75
USP43-204ENST00000573955 GSPT1P15170 499 aaKnown RBP19.72■□□□□ 0.75
USP43-204ENST00000573955 HOXB7P09629 217 aa19.71■□□□□ 0.75
USP43-204ENST00000573955 KDM6AO15550 1401 aaPredicted RBP19.71■□□□□ 0.75
USP43-204ENST00000573955 UBTFL1P0CB47 393 aaPredicted RBP19.71■□□□□ 0.75
USP43-204ENST00000573955 CACNA1FO60840 1977 aa19.7■□□□□ 0.74
USP43-204ENST00000573955 SRCIN1Q9C0H9 1055 aa19.7■□□□□ 0.74
USP43-204ENST00000573955 CYP27B1O15528 508 aa19.7■□□□□ 0.74
USP43-204ENST00000573955 SLC52A2Q9HAB3 445 aa19.7■□□□□ 0.74
USP43-204ENST00000573955 TBC1D9Q6ZT07 1266 aa19.69■□□□□ 0.74
USP43-204ENST00000573955 TOM1L2Q6ZVM7 507 aa19.69■□□□□ 0.74
USP43-204ENST00000573955 IFNL2Q8IZJ0 200 aa19.69■□□□□ 0.74
USP43-204ENST00000573955 DNAAF4Q8WXU2 420 aa19.69■□□□□ 0.74
USP43-204ENST00000573955 DBF4Q9UBU7 674 aaPredicted RBP19.69■□□□□ 0.74
USP43-204ENST00000573955 AIMP1Q12904 312 aaKnown RBP19.69■□□□□ 0.74
USP43-204ENST00000573955 CRYBG1Q9Y4K1 1723 aa19.68■□□□□ 0.74
USP43-204ENST00000573955 ZNF790Q6PG37 636 aa19.68■□□□□ 0.74
USP43-204ENST00000573955 OVOS2A0A0G2JMS6 1433 aa19.67■□□□□ 0.74
USP43-204ENST00000573955 CPDO75976 1380 aa19.67■□□□□ 0.74
USP43-204ENST00000573955 NBPF7P0C2Y1 421 aaPredicted RBP19.67■□□□□ 0.74
USP43-204ENST00000573955 LARP1Q6PKG0 1096 aaKnown RBP19.67■□□□□ 0.74
USP43-204ENST00000573955 TSHZ3Q63HK5 1081 aa19.67■□□□□ 0.74
USP43-204ENST00000573955 ADCY9O60503 1353 aa19.66■□□□□ 0.74
USP43-204ENST00000573955 TPM2P07951 284 aa19.66■□□□□ 0.74
USP43-204ENST00000573955 BECN1Q14457 450 aa19.66■□□□□ 0.74
USP43-204ENST00000573955 TTC22Q5TAA0 569 aa19.66■□□□□ 0.74
USP43-204ENST00000573955 MAP3K2Q9Y2U5 619 aa19.66■□□□□ 0.74
USP43-204ENST00000573955 ADAMTS2O95450 1211 aa19.66■□□□□ 0.74
USP43-204ENST00000573955 PIP4K2AP48426 406 aaPredicted RBP19.66■□□□□ 0.74
USP43-204ENST00000573955 ATP8B2P98198 1209 aa19.66■□□□□ 0.74
USP43-204ENST00000573955 BEND3Q5T5X7 828 aa19.66■□□□□ 0.74
USP43-204ENST00000573955 MYL6BP14649 208 aa19.65■□□□□ 0.74
USP43-204ENST00000573955 SPRYD3Q8NCJ5 442 aa19.65■□□□□ 0.74
USP43-204ENST00000573955 SLKQ9H2G2 1235 aaPredicted RBP19.65■□□□□ 0.74
USP43-204ENST00000573955 PXDNLA1KZ92 1463 aa19.65■□□□□ 0.74
USP43-204ENST00000573955 ROBO1Q9Y6N7 1651 aa19.64■□□□□ 0.74
USP43-204ENST00000573955 NUTM2BA6NNL0 878 aaPredicted RBP19.64■□□□□ 0.73
USP43-204ENST00000573955 NUTM2EB1AL46 878 aaPredicted RBP19.64■□□□□ 0.73
USP43-204ENST00000573955 NUTM2AQ8IVF1 878 aaPredicted RBP19.64■□□□□ 0.73
USP43-204ENST00000573955 ZNF496Q96IT1 587 aaPredicted RBP19.64■□□□□ 0.73
USP43-204ENST00000573955 SIPA1L3O60292 1781 aaPredicted RBP19.64■□□□□ 0.73
USP43-204ENST00000573955 EVA1CP58658 441 aa19.64■□□□□ 0.73
USP43-204ENST00000573955 CHMP4AQ9BY43 222 aa19.64■□□□□ 0.73
USP43-204ENST00000573955 TBC1D2Q9BYX2 928 aa19.64■□□□□ 0.73
USP43-204ENST00000573955 HEG1Q9ULI3 1381 aa19.64■□□□□ 0.73
USP43-204ENST00000573955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.63■□□□□ 0.73
USP43-204ENST00000573955 WDR17Q8IZU2 1322 aa19.63■□□□□ 0.73
USP43-204ENST00000573955 CDC45O75419 566 aa19.63■□□□□ 0.73
USP43-204ENST00000573955 GTF2E1P29083 439 aaPredicted RBP19.63■□□□□ 0.73
USP43-204ENST00000573955 CWF19L2Q2TBE0 894 aaKnown RBP19.63■□□□□ 0.73
USP43-204ENST00000573955 DCAF5Q96JK2 942 aa19.63■□□□□ 0.73
USP43-204ENST00000573955 BTG4Q9NY30 223 aa19.63■□□□□ 0.73
USP43-204ENST00000573955 PPP1R42Q7Z4L9 355 aa19.62■□□□□ 0.73
USP43-204ENST00000573955 TTC5Q8N0Z6 440 aa19.62■□□□□ 0.73
USP43-204ENST00000573955 SCN11AQ9UI33 1791 aa19.62■□□□□ 0.73
USP43-204ENST00000573955 CABP4P57796 275 aa19.62■□□□□ 0.73
USP43-204ENST00000573955 LRRCC1Q9C099 1032 aa19.62■□□□□ 0.73
USP43-204ENST00000573955 LTBP4Q8N2S1 1624 aa19.62■□□□□ 0.73
USP43-204ENST00000573955 DDX54Q8TDD1 881 aaKnown RBP19.61■□□□□ 0.73
USP43-204ENST00000573955 IL1RAPL2Q9NP60 686 aa19.61■□□□□ 0.73
USP43-204ENST00000573955 ADAMTS7Q9UKP4 1686 aa19.61■□□□□ 0.73
USP43-204ENST00000573955 SRGAP3O43295 1099 aa19.6■□□□□ 0.73
USP43-204ENST00000573955 SDSP20132 328 aa19.6■□□□□ 0.73
USP43-204ENST00000573955 PDIA6Q15084 440 aa19.6■□□□□ 0.73
USP43-204ENST00000573955 KSR2Q6VAB6 950 aa19.6■□□□□ 0.73
USP43-204ENST00000573955 HYPKQ9NX55 129 aa19.6■□□□□ 0.73
USP43-204ENST00000573955 USP16Q9Y5T5 823 aa19.6■□□□□ 0.73
USP43-204ENST00000573955 DDX21Q9NR30 783 aaKnown RBP eCLIP19.59■□□□□ 0.73
USP43-204ENST00000573955 C9orf78Q9NZ63 289 aaPredicted RBP19.59■□□□□ 0.73
USP43-204ENST00000573955 SURF6O75683 361 aaKnown RBP19.59■□□□□ 0.73
USP43-204ENST00000573955 ZCRB1Q8TBF4 217 aaKnown RBP19.59■□□□□ 0.73
USP43-204ENST00000573955 KAT6BQ8WYB5 2073 aa19.59■□□□□ 0.73
USP43-204ENST00000573955 N4BP2Q86UW6 1770 aaPredicted RBP19.59■□□□□ 0.73
USP43-204ENST00000573955 COL5A2P05997 1499 aaPredicted RBP19.59■□□□□ 0.73
USP43-204ENST00000573955 NHSL1Q5SYE7 1610 aa19.58■□□□□ 0.73
USP43-204ENST00000573955 PDE1AP54750 535 aa19.58■□□□□ 0.73
USP43-204ENST00000573955 PAXIP1Q6ZW49 1069 aaPredicted RBP19.58■□□□□ 0.72
USP43-204ENST00000573955 IBTKQ9P2D0 1353 aaPredicted RBP19.58■□□□□ 0.72
USP43-204ENST00000573955 C5P01031 1676 aa19.58■□□□□ 0.72
USP43-204ENST00000573955 ABCC6O95255 1503 aa19.57■□□□□ 0.72
USP43-204ENST00000573955 RIC3Q7Z5B4 369 aa19.57■□□□□ 0.72
USP43-204ENST00000573955 SSH3Q8TE77 659 aa19.57■□□□□ 0.72
USP43-204ENST00000573955 RBM25P49756 843 aaKnown RBP19.56■□□□□ 0.72
USP43-204ENST00000573955 XAGE3Q8WTP9 111 aa19.56■□□□□ 0.72
USP43-204ENST00000573955 ABCA3Q99758 1704 aa19.56■□□□□ 0.72
USP43-204ENST00000573955 UBAP1LF5GYI3 381 aa19.56■□□□□ 0.72
USP43-204ENST00000573955 HSP90AB1P08238 724 aaKnown RBP19.56■□□□□ 0.72
USP43-204ENST00000573955 COPS6Q7L5N1 327 aa19.55■□□□□ 0.72
USP43-204ENST00000573955 NUTM1Q86Y26 1132 aa19.55■□□□□ 0.72
USP43-204ENST00000573955 IPO4Q8TEX9 1081 aaKnown RBP19.55■□□□□ 0.72
USP43-204ENST00000573955 PKD1L3Q7Z443 1732 aa19.55■□□□□ 0.72
USP43-204ENST00000573955 PCDH11XQ9BZA7 1347 aa19.55■□□□□ 0.72
USP43-204ENST00000573955 PCDH11YQ9BZA8 1340 aa19.55■□□□□ 0.72
USP43-204ENST00000573955 DDX58O95786 925 aaKnown RBP19.55■□□□□ 0.72
USP43-204ENST00000573955 SNRPA1P09661 255 aaKnown RBP19.55■□□□□ 0.72
USP43-204ENST00000573955 IL2RBP14784 551 aa19.55■□□□□ 0.72
USP43-204ENST00000573955 MX1P20591 662 aa19.55■□□□□ 0.72
USP43-204ENST00000573955 FMNL2Q96PY5 1086 aa19.55■□□□□ 0.72
USP43-204ENST00000573955 NCLP19338 710 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms