RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 GPR162Q16538 588 aa12.36□□□□□ -0.43
NDE1-208ENST00000573694 MTHFSDQ2M296 383 aaKnown RBP12.36□□□□□ -0.43
NDE1-208ENST00000573694 B4GALNT3Q6L9W6 998 aa12.36□□□□□ -0.43
NDE1-208ENST00000573694 CRBNQ96SW2 442 aa12.36□□□□□ -0.43
NDE1-208ENST00000573694 RARSP54136 660 aaKnown RBP12.35□□□□□ -0.43
NDE1-208ENST00000573694 KCNQ4P56696 695 aa12.35□□□□□ -0.43
NDE1-208ENST00000573694 MCM10Q7L590 875 aa12.35□□□□□ -0.43
NDE1-208ENST00000573694 GAS2L2Q8NHY3 880 aa12.35□□□□□ -0.43
NDE1-208ENST00000573694 BCL2L13Q9BXK5 485 aa12.35□□□□□ -0.43
NDE1-208ENST00000573694 TEX13AQ9BXU3 409 aaPredicted RBP12.35□□□□□ -0.43
NDE1-208ENST00000573694 SLC52A2Q9HAB3 445 aa12.35□□□□□ -0.43
NDE1-208ENST00000573694 TOGARAM1Q9Y4F4 1720 aa12.34□□□□□ -0.43
NDE1-208ENST00000573694 SIPA1L3O60292 1781 aaPredicted RBP12.34□□□□□ -0.43
NDE1-208ENST00000573694 KDM3BQ7LBC6 1761 aa12.34□□□□□ -0.43
NDE1-208ENST00000573694 ZNF853P0CG23 659 aa12.34□□□□□ -0.43
NDE1-208ENST00000573694 TGFB2P61812 414 aa12.34□□□□□ -0.43
NDE1-208ENST00000573694 NFATC2IPQ8NCF5 419 aa12.34□□□□□ -0.43
NDE1-208ENST00000573694 LINC00116Q8NCU8 138 aa12.34□□□□□ -0.43
NDE1-208ENST00000573694 IFT57Q9NWB7 429 aa12.34□□□□□ -0.43
NDE1-208ENST00000573694 GNPATO15228 680 aa12.33□□□□□ -0.44
NDE1-208ENST00000573694 CALD1Q05682 793 aaKnown RBP12.33□□□□□ -0.44
NDE1-208ENST00000573694 ITPK1Q13572 414 aa12.33□□□□□ -0.44
NDE1-208ENST00000573694 MBIPQ9NS73 344 aa12.33□□□□□ -0.44
NDE1-208ENST00000573694 KDM6AO15550 1401 aaPredicted RBP12.33□□□□□ -0.44
NDE1-208ENST00000573694 UBR3Q6ZT12 1888 aa12.33□□□□□ -0.44
NDE1-208ENST00000573694 CICQ96RK0 1608 aaPredicted RBP12.33□□□□□ -0.44
NDE1-208ENST00000573694 ADAMTS7Q9UKP4 1686 aa12.32□□□□□ -0.44
NDE1-208ENST00000573694 HTATSF1O43719 755 aaKnown RBP12.32□□□□□ -0.44
NDE1-208ENST00000573694 RFC4P35249 363 aa12.32□□□□□ -0.44
NDE1-208ENST00000573694 GNAI1P63096 354 aa12.32□□□□□ -0.44
NDE1-208ENST00000573694 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
NDE1-208ENST00000573694 TNNQ9UQP3 1299 aa12.32□□□□□ -0.44
NDE1-208ENST00000573694 SCN11AQ9UI33 1791 aa12.32□□□□□ -0.44
NDE1-208ENST00000573694 TUBGCP6Q96RT7 1819 aa12.32□□□□□ -0.44
NDE1-208ENST00000573694 RNMTO43148 476 aaKnown RBP12.31□□□□□ -0.44
NDE1-208ENST00000573694 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.31□□□□□ -0.44
NDE1-208ENST00000573694 MRC1P22897 1456 aa12.3□□□□□ -0.44
NDE1-208ENST00000573694 GNAT3A8MTJ3 354 aa12.3□□□□□ -0.44
NDE1-208ENST00000573694 RGL2O15211 777 aa12.3□□□□□ -0.44
NDE1-208ENST00000573694 CT47B1P0C2W7 299 aaPredicted RBP12.3□□□□□ -0.44
NDE1-208ENST00000573694 TSPYL6Q8N831 410 aa12.3□□□□□ -0.44
NDE1-208ENST00000573694 ARHGEF1Q92888 912 aaKnown RBP12.3□□□□□ -0.44
NDE1-208ENST00000573694 CFAP44Q96MT7 982 aa12.3□□□□□ -0.44
NDE1-208ENST00000573694 STARD3NLO95772 234 aa12.29□□□□□ -0.44
NDE1-208ENST00000573694 CANXP27824 592 aaKnown RBP12.29□□□□□ -0.44
NDE1-208ENST00000573694 ZNF784Q8NCA9 323 aaPredicted RBP12.29□□□□□ -0.44
NDE1-208ENST00000573694 SSH1Q8WYL5 1049 aa12.29□□□□□ -0.44
NDE1-208ENST00000573694 FRAT1Q92837 279 aaPredicted RBP12.29□□□□□ -0.44
NDE1-208ENST00000573694 SLC4A9Q96Q91 983 aa12.29□□□□□ -0.44
NDE1-208ENST00000573694 SMC4Q9NTJ3 1288 aa12.29□□□□□ -0.44
NDE1-208ENST00000573694 CCDC87Q9NVE4 849 aa12.29□□□□□ -0.44
NDE1-208ENST00000573694 PDZRN3Q9UPQ7 1066 aa12.29□□□□□ -0.44
NDE1-208ENST00000573694 A0A087WZG4 1122 aa12.28□□□□□ -0.44
NDE1-208ENST00000573694 CRKLP46109 303 aaKnown RBP12.28□□□□□ -0.44
NDE1-208ENST00000573694 KRT24Q2M2I5 525 aa12.28□□□□□ -0.44
NDE1-208ENST00000573694 RTF1Q92541 710 aaKnown RBP12.28□□□□□ -0.44
NDE1-208ENST00000573694 PARP3Q9Y6F1 533 aa12.28□□□□□ -0.44
NDE1-208ENST00000573694 CHL1O00533 1208 aa12.27□□□□□ -0.45
NDE1-208ENST00000573694 PTCD1O75127 700 aaKnown RBP12.27□□□□□ -0.45
NDE1-208ENST00000573694 PHF14O94880 888 aa12.27□□□□□ -0.45
NDE1-208ENST00000573694 MMP10P09238 476 aa12.27□□□□□ -0.45
NDE1-208ENST00000573694 RLBP1P12271 317 aa12.27□□□□□ -0.45
NDE1-208ENST00000573694 GYS1P13807 737 aa12.27□□□□□ -0.45
NDE1-208ENST00000573694 TEFQ10587 303 aa12.27□□□□□ -0.45
NDE1-208ENST00000573694 TTC5Q8N0Z6 440 aa12.27□□□□□ -0.45
NDE1-208ENST00000573694 C8orf58Q8NAV2 365 aa12.27□□□□□ -0.45
NDE1-208ENST00000573694 PANK1Q8TE04 598 aa12.27□□□□□ -0.45
NDE1-208ENST00000573694 CCDC136Q96JN2 1154 aa12.27□□□□□ -0.45
NDE1-208ENST00000573694 ELL2O00472 640 aaPredicted RBP12.26□□□□□ -0.45
NDE1-208ENST00000573694 ZPR1O75312 459 aa12.26□□□□□ -0.45
NDE1-208ENST00000573694 VAMP4O75379 141 aa12.26□□□□□ -0.45
NDE1-208ENST00000573694 IL17REQ8NFR9 667 aa12.26□□□□□ -0.45
NDE1-208ENST00000573694 NLGN2Q8NFZ4 835 aa12.26□□□□□ -0.45
NDE1-208ENST00000573694 MIS18AQ9NYP9 233 aa12.26□□□□□ -0.45
NDE1-208ENST00000573694 CEMIPQ8WUJ3 1361 aa12.26□□□□□ -0.45
NDE1-208ENST00000573694 COL5A3P25940 1745 aaPredicted RBP12.25□□□□□ -0.45
NDE1-208ENST00000573694 TCERG1O14776 1098 aaKnown RBP12.25□□□□□ -0.45
NDE1-208ENST00000573694 CYP19A1P11511 503 aaPredicted RBP12.25□□□□□ -0.45
NDE1-208ENST00000573694 TWISTNBQ3B726 338 aaPredicted RBP12.25□□□□□ -0.45
NDE1-208ENST00000573694 MSL1Q68DK7 614 aa12.25□□□□□ -0.45
NDE1-208ENST00000573694 INTS5Q6P9B9 1019 aaKnown RBP12.25□□□□□ -0.45
NDE1-208ENST00000573694 KLHL34Q8N239 644 aa12.25□□□□□ -0.45
NDE1-208ENST00000573694 LGR6Q9HBX8 967 aa12.25□□□□□ -0.45
NDE1-208ENST00000573694 NARFQ9UHQ1 456 aa12.25□□□□□ -0.45
NDE1-208ENST00000573694 TSPYL4Q9UJ04 414 aa12.25□□□□□ -0.45
NDE1-208ENST00000573694 USP42Q9H9J4 1324 aaKnown RBP12.25□□□□□ -0.45
NDE1-208ENST00000573694 CACNA1FO60840 1977 aa12.25□□□□□ -0.45
NDE1-208ENST00000573694 TM4SF1P30408 202 aa12.24□□□□□ -0.45
NDE1-208ENST00000573694 PDE3AQ14432 1141 aa12.24□□□□□ -0.45
NDE1-208ENST00000573694 ZNF790Q6PG37 636 aa12.24□□□□□ -0.45
NDE1-208ENST00000573694 AMIGO3Q86WK7 504 aa12.24□□□□□ -0.45
NDE1-208ENST00000573694 COG6Q9Y2V7 657 aa12.24□□□□□ -0.45
NDE1-208ENST00000573694 N4BP2Q86UW6 1770 aaPredicted RBP12.23□□□□□ -0.45
NDE1-208ENST00000573694 SOS1Q07889 1333 aaPredicted RBP12.23□□□□□ -0.45
NDE1-208ENST00000573694 KIF16BQ96L93 1317 aa12.23□□□□□ -0.45
NDE1-208ENST00000573694 YBX3P16989 372 aaKnown RBP eCLIP12.23□□□□□ -0.45
NDE1-208ENST00000573694 ALDH1L2Q3SY69 923 aa12.23□□□□□ -0.45
NDE1-208ENST00000573694 ZKSCAN2Q63HK3 967 aa12.23□□□□□ -0.45
NDE1-208ENST00000573694 NPM2Q86SE8 214 aaKnown RBP12.23□□□□□ -0.45
NDE1-208ENST00000573694 MRPL50Q8N5N7 158 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms