RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 NBPF4Q96M43 638 aa10.97□□□□□ -0.65
USP6-204ENST00000572949 JAKMIP1Q96N16 626 aaKnown RBP10.97□□□□□ -0.65
USP6-204ENST00000572949 PHAXQ9H814 394 aaKnown RBP10.97□□□□□ -0.65
USP6-204ENST00000572949 ZBED9Q6R2W3 1325 aa10.97□□□□□ -0.65
USP6-204ENST00000572949 SMTNL1A8MU46 457 aa10.97□□□□□ -0.65
USP6-204ENST00000572949 RNF41Q9H4P4 317 aaPredicted RBP10.97□□□□□ -0.65
USP6-204ENST00000572949 SLC52A1Q9NWF4 448 aa10.97□□□□□ -0.65
USP6-204ENST00000572949 NOD1Q9Y239 953 aa10.97□□□□□ -0.65
USP6-204ENST00000572949 EXOSC9Q06265 439 aaKnown RBP10.97□□□□□ -0.65
USP6-204ENST00000572949 C8orf37Q96NL8 207 aa10.97□□□□□ -0.65
USP6-204ENST00000572949 MYD88Q99836 296 aa10.97□□□□□ -0.65
USP6-204ENST00000572949 GPTP24298 496 aa10.97□□□□□ -0.65
USP6-204ENST00000572949 RBM26Q5T8P6 1007 aaKnown RBP10.97□□□□□ -0.65
USP6-204ENST00000572949 TCERG1LQ5VWI1 586 aa10.97□□□□□ -0.65
USP6-204ENST00000572949 CALML4Q96GE6 196 aa10.97□□□□□ -0.65
USP6-204ENST00000572949 PRC1O43663 620 aa10.96□□□□□ -0.65
USP6-204ENST00000572949 ARHGAP29Q52LW3 1261 aa10.96□□□□□ -0.65
USP6-204ENST00000572949 SLC12A7Q9Y666 1083 aa10.96□□□□□ -0.65
USP6-204ENST00000572949 STX6O43752 255 aa10.96□□□□□ -0.65
USP6-204ENST00000572949 CCDC82Q8N4S0 544 aa10.96□□□□□ -0.65
USP6-204ENST00000572949 TAOK3Q9H2K8 898 aa10.96□□□□□ -0.65
USP6-204ENST00000572949 PRKRIP1Q9H875 184 aaPredicted RBP10.96□□□□□ -0.65
USP6-204ENST00000572949 RAD54L2Q9Y4B4 1467 aa10.96□□□□□ -0.65
USP6-204ENST00000572949 PDE4BQ07343 736 aa10.96□□□□□ -0.65
USP6-204ENST00000572949 BCAR3O75815 825 aa10.96□□□□□ -0.66
USP6-204ENST00000572949 ZWINTO95229 277 aa10.96□□□□□ -0.66
USP6-204ENST00000572949 KLHL10Q6JEL2 608 aa10.96□□□□□ -0.66
USP6-204ENST00000572949 EP400NLQ6ZTU2 488 aa10.96□□□□□ -0.66
USP6-204ENST00000572949 PHACTR2O75167 634 aa10.96□□□□□ -0.66
USP6-204ENST00000572949 SREK1Q8WXA9 508 aaKnown RBP10.96□□□□□ -0.66
USP6-204ENST00000572949 GCOM1H8Y6P7 765 aaPredicted RBP10.96□□□□□ -0.66
USP6-204ENST00000572949 MYZAPP0CAP1 466 aa10.96□□□□□ -0.66
USP6-204ENST00000572949 IFFO1Q0D2I5 559 aa10.95□□□□□ -0.66
USP6-204ENST00000572949 VEZTQ9HBM0 779 aa10.95□□□□□ -0.66
USP6-204ENST00000572949 WDR33Q9C0J8 1336 aaKnown RBP10.95□□□□□ -0.66
USP6-204ENST00000572949 KIF5BP33176 963 aa10.95□□□□□ -0.66
USP6-204ENST00000572949 TSHZ2Q9NRE2 1034 aa10.95□□□□□ -0.66
USP6-204ENST00000572949 LPXNO60711 386 aa10.95□□□□□ -0.66
USP6-204ENST00000572949 LUZP1Q86V48 1076 aa10.95□□□□□ -0.66
USP6-204ENST00000572949 UPF3BQ9BZI7 483 aaKnown RBP10.95□□□□□ -0.66
USP6-204ENST00000572949 GSTO1P78417 241 aa10.95□□□□□ -0.66
USP6-204ENST00000572949 SYNJ2O15056 1496 aa10.95□□□□□ -0.66
USP6-204ENST00000572949 NDC80O14777 642 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 DDX11Q96FC9 970 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 ZNF408Q9H9D4 720 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 WIZO95785 1651 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 TSPY2A6NKD2 308 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 ZNF213O14771 459 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 SETDB2Q96T68 719 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 IKBKGQ9Y6K9 419 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 CFAP100Q494V2 611 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 AMOTQ4VCS5 1084 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 KAT14Q9H8E8 782 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 SCAPERQ9BY12 1400 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 PPP6R1Q9UPN7 881 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 AMPD3Q01432 767 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 TDRD12Q587J7 1177 aaKnown RBP10.94□□□□□ -0.66
USP6-204ENST00000572949 ALS2CR12Q96Q35 445 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 TCP11L1Q9NUJ3 509 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 CUX1P39880 1505 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 SSRP1Q08945 709 aaKnown RBP10.94□□□□□ -0.66
USP6-204ENST00000572949 PPP1R14CQ8TAE6 165 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 PARP3Q9Y6F1 533 aa10.94□□□□□ -0.66
USP6-204ENST00000572949 F8W031 263 aaPredicted RBP10.94□□□□□ -0.66
USP6-204ENST00000572949 FSD2A1L4K1 749 aa10.93□□□□□ -0.66
USP6-204ENST00000572949 DNA2P51530 1060 aa10.93□□□□□ -0.66
USP6-204ENST00000572949 IL27Q8NEV9 243 aa10.93□□□□□ -0.66
USP6-204ENST00000572949 CCDC7Q96M83 1385 aa10.93□□□□□ -0.66
USP6-204ENST00000572949 TRAF1Q13077 416 aa10.93□□□□□ -0.66
USP6-204ENST00000572949 USP37Q86T82 979 aa10.93□□□□□ -0.66
USP6-204ENST00000572949 IFIT3O14879 490 aaKnown RBP10.93□□□□□ -0.66
USP6-204ENST00000572949 DPH6Q7L8W6 267 aa10.93□□□□□ -0.66
USP6-204ENST00000572949 TEX13AQ9BXU3 409 aaPredicted RBP10.93□□□□□ -0.66
USP6-204ENST00000572949 IL1RAPL2Q9NP60 686 aa10.93□□□□□ -0.66
USP6-204ENST00000572949 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.93□□□□□ -0.66
USP6-204ENST00000572949 ODF2LQ9ULJ1 636 aa10.93□□□□□ -0.66
USP6-204ENST00000572949 TCHPQ9BT92 498 aa10.93□□□□□ -0.66
USP6-204ENST00000572949 TFCP2L1Q9NZI6 479 aa10.93□□□□□ -0.66
USP6-204ENST00000572949 FOXO3O43524 673 aa10.93□□□□□ -0.66
USP6-204ENST00000572949 RAPGEF3O95398 923 aa10.93□□□□□ -0.66
USP6-204ENST00000572949 TSR2Q969E8 191 aaKnown RBP10.93□□□□□ -0.66
USP6-204ENST00000572949 MMRN2Q9H8L6 949 aa10.93□□□□□ -0.66
USP6-204ENST00000572949 FANCIQ9NVI1 1328 aa10.92□□□□□ -0.66
USP6-204ENST00000572949 CASTP20810 708 aaKnown RBP10.92□□□□□ -0.66
USP6-204ENST00000572949 BCCIPQ9P287 314 aaKnown RBP eCLIP10.92□□□□□ -0.66
USP6-204ENST00000572949 ZSCAN31Q96LW9 406 aaPredicted RBP10.92□□□□□ -0.66
USP6-204ENST00000572949 PRPF4BQ13523 1007 aaKnown RBP10.92□□□□□ -0.66
USP6-204ENST00000572949 CCDC102AQ96A19 550 aa10.92□□□□□ -0.66
USP6-204ENST00000572949 TBCAO75347 108 aaKnown RBP10.92□□□□□ -0.66
USP6-204ENST00000572949 PPP4R3BQ5MIZ7 849 aa10.92□□□□□ -0.66
USP6-204ENST00000572949 SPATA24Q86W54 205 aa10.92□□□□□ -0.66
USP6-204ENST00000572949 GPHNQ9NQX3 736 aaPredicted RBP10.92□□□□□ -0.66
USP6-204ENST00000572949 FAM212AQ96EL1 285 aa10.92□□□□□ -0.66
USP6-204ENST00000572949 GJA3Q9Y6H8 435 aa10.92□□□□□ -0.66
USP6-204ENST00000572949 PRKCSHP14314 528 aaPredicted RBP10.91□□□□□ -0.66
USP6-204ENST00000572949 SNX16P57768 344 aa10.91□□□□□ -0.66
USP6-204ENST00000572949 CCDC40Q4G0X9 1142 aa10.91□□□□□ -0.66
USP6-204ENST00000572949 CCDC66A2RUB6 948 aa10.91□□□□□ -0.66
USP6-204ENST00000572949 NOC2LQ9Y3T9 749 aaKnown RBP10.91□□□□□ -0.66
USP6-204ENST00000572949 KMT5BQ4FZB7 885 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms