RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 CHRNA5P30532 468 aa19.92■□□□□ 0.78
NPLOC4-207ENST00000572346 DALRD3Q5D0E6 543 aaKnown RBP19.92■□□□□ 0.78
NPLOC4-207ENST00000572346 COL15A1P39059 1388 aa19.92■□□□□ 0.78
NPLOC4-207ENST00000572346 COL3A1P02461 1466 aaPredicted RBP19.92■□□□□ 0.78
NPLOC4-207ENST00000572346 AFDNP55196 1824 aaKnown RBP19.91■□□□□ 0.78
NPLOC4-207ENST00000572346 C9orf131Q5VYM1 1079 aa19.91■□□□□ 0.78
NPLOC4-207ENST00000572346 VSIG10Q8N0Z9 540 aa19.91■□□□□ 0.78
NPLOC4-207ENST00000572346 NARFQ9UHQ1 456 aa19.91■□□□□ 0.78
NPLOC4-207ENST00000572346 NPC1L1Q9UHC9 1359 aa19.91■□□□□ 0.78
NPLOC4-207ENST00000572346 NFIXQ14938 502 aa19.9■□□□□ 0.78
NPLOC4-207ENST00000572346 NMRK2Q9NPI5 230 aa19.9■□□□□ 0.78
NPLOC4-207ENST00000572346 TOMM70O94826 608 aa19.89■□□□□ 0.77
NPLOC4-207ENST00000572346 NRXN2Q9P2S2 1712 aa19.89■□□□□ 0.77
NPLOC4-207ENST00000572346 DDX10Q13206 875 aaKnown RBP19.88■□□□□ 0.77
NPLOC4-207ENST00000572346 CNGB1Q14028 1251 aaPredicted RBP19.88■□□□□ 0.77
NPLOC4-207ENST00000572346 BCL2L12Q9HB09 334 aa19.88■□□□□ 0.77
NPLOC4-207ENST00000572346 U2SURPO15042 1029 aaKnown RBP19.87■□□□□ 0.77
NPLOC4-207ENST00000572346 TTC5Q8N0Z6 440 aa19.87■□□□□ 0.77
NPLOC4-207ENST00000572346 SBF1O95248 1867 aa19.87■□□□□ 0.77
NPLOC4-207ENST00000572346 CANXP27824 592 aaKnown RBP19.86■□□□□ 0.77
NPLOC4-207ENST00000572346 IL17REQ8NFR9 667 aa19.86■□□□□ 0.77
NPLOC4-207ENST00000572346 RNF181Q9P0P0 153 aa19.86■□□□□ 0.77
NPLOC4-207ENST00000572346 GNAT3A8MTJ3 354 aa19.85■□□□□ 0.77
NPLOC4-207ENST00000572346 SERPINB2P05120 415 aa19.85■□□□□ 0.77
NPLOC4-207ENST00000572346 GAS2L2Q8NHY3 880 aa19.85■□□□□ 0.77
NPLOC4-207ENST00000572346 SIPA1L3O60292 1781 aaPredicted RBP19.85■□□□□ 0.77
NPLOC4-207ENST00000572346 STARD3NLO95772 234 aa19.84■□□□□ 0.77
NPLOC4-207ENST00000572346 EIF5P55010 431 aaKnown RBP19.84■□□□□ 0.77
NPLOC4-207ENST00000572346 TEFQ10587 303 aa19.84■□□□□ 0.77
NPLOC4-207ENST00000572346 ZNF496Q96IT1 587 aaPredicted RBP19.84■□□□□ 0.77
NPLOC4-207ENST00000572346 DLEC1Q9Y238 1755 aa19.84■□□□□ 0.77
NPLOC4-207ENST00000572346 APLP1P51693 650 aa19.83■□□□□ 0.77
NPLOC4-207ENST00000572346 ZNF790Q6PG37 636 aa19.83■□□□□ 0.77
NPLOC4-207ENST00000572346 HEG1Q9ULI3 1381 aa19.83■□□□□ 0.76
NPLOC4-207ENST00000572346 IFFO2Q5TF58 517 aa19.82■□□□□ 0.76
NPLOC4-207ENST00000572346 KDM2BQ8NHM5 1336 aa19.81■□□□□ 0.76
NPLOC4-207ENST00000572346 BICDL1Q6ZP65 573 aa19.81■□□□□ 0.76
NPLOC4-207ENST00000572346 RBM46Q8TBY0 533 aaKnown RBP19.81■□□□□ 0.76
NPLOC4-207ENST00000572346 CARMIL3Q8ND23 1372 aa19.81■□□□□ 0.76
NPLOC4-207ENST00000572346 A0A087WZG4 1122 aa19.8■□□□□ 0.76
NPLOC4-207ENST00000572346 RASSF7Q02833 373 aa19.8■□□□□ 0.76
NPLOC4-207ENST00000572346 TEX13AQ9BXU3 409 aaPredicted RBP19.8■□□□□ 0.76
NPLOC4-207ENST00000572346 SCN7AQ01118 1682 aa19.8■□□□□ 0.76
NPLOC4-207ENST00000572346 CEMIPQ8WUJ3 1361 aa19.8■□□□□ 0.76
NPLOC4-207ENST00000572346 C16orf71Q8IYS4 520 aaPredicted RBP19.79■□□□□ 0.76
NPLOC4-207ENST00000572346 TTLL6Q8N841 843 aa19.79■□□□□ 0.76
NPLOC4-207ENST00000572346 PHACTR3Q96KR7 559 aa19.79■□□□□ 0.76
NPLOC4-207ENST00000572346 TNRC6CQ9HCJ0 1690 aaKnown RBP19.78■□□□□ 0.76
NPLOC4-207ENST00000572346 PRKAR2BP31323 418 aa19.78■□□□□ 0.76
NPLOC4-207ENST00000572346 TBC1D9BQ66K14 1250 aa19.78■□□□□ 0.76
NPLOC4-207ENST00000572346 C2CD5Q86YS7 1000 aa19.78■□□□□ 0.76
NPLOC4-207ENST00000572346 FMNL2Q96PY5 1086 aa19.78■□□□□ 0.76
NPLOC4-207ENST00000572346 RSPH6AQ9H0K4 717 aa19.78■□□□□ 0.76
NPLOC4-207ENST00000572346 ANKRD31Q8N7Z5 1873 aa19.77■□□□□ 0.76
NPLOC4-207ENST00000572346 H0YIN7 160 aa19.77■□□□□ 0.76
NPLOC4-207ENST00000572346 IL6STP40189 918 aaPredicted RBP19.77■□□□□ 0.76
NPLOC4-207ENST00000572346 DNAJC5GQ8N7S2 189 aa19.77■□□□□ 0.76
NPLOC4-207ENST00000572346 RRAGCQ9HB90 399 aa19.77■□□□□ 0.76
NPLOC4-207ENST00000572346 TBC1D2BQ9UPU7 963 aa19.77■□□□□ 0.76
NPLOC4-207ENST00000572346 ZNF330Q9Y3S2 320 aaPredicted RBP19.77■□□□□ 0.76
NPLOC4-207ENST00000572346 WDR90Q96KV7 1748 aa19.76■□□□□ 0.75
NPLOC4-207ENST00000572346 KCNQ3O43525 872 aa19.76■□□□□ 0.75
NPLOC4-207ENST00000572346 LMNB1P20700 586 aa19.76■□□□□ 0.75
NPLOC4-207ENST00000572346 PRELPP51888 382 aa19.76■□□□□ 0.75
NPLOC4-207ENST00000572346 CFAP53Q96M91 514 aa19.76■□□□□ 0.75
NPLOC4-207ENST00000572346 ZC3H4Q9UPT8 1303 aaKnown RBP19.76■□□□□ 0.75
NPLOC4-207ENST00000572346 CCDC88AQ3V6T2 1871 aa19.75■□□□□ 0.75
NPLOC4-207ENST00000572346 BTBD11A6QL63 1104 aa19.75■□□□□ 0.75
NPLOC4-207ENST00000572346 A1BGP04217 495 aa19.75■□□□□ 0.75
NPLOC4-207ENST00000572346 FSTL1Q12841 308 aa19.74■□□□□ 0.75
NPLOC4-207ENST00000572346 PRR5LQ6MZQ0 368 aa19.73■□□□□ 0.75
NPLOC4-207ENST00000572346 BRIP1Q9BX63 1249 aa19.73■□□□□ 0.75
NPLOC4-207ENST00000572346 NUDCQ9Y266 331 aa19.73■□□□□ 0.75
NPLOC4-207ENST00000572346 COL11A2P13942 1736 aaPredicted RBP19.73■□□□□ 0.75
NPLOC4-207ENST00000572346 NFKBIEO00221 500 aa19.72■□□□□ 0.75
NPLOC4-207ENST00000572346 CAMTA2O94983 1202 aa19.72■□□□□ 0.75
NPLOC4-207ENST00000572346 PDE6BP35913 854 aa19.72■□□□□ 0.75
NPLOC4-207ENST00000572346 NPM2Q86SE8 214 aaKnown RBP19.72■□□□□ 0.75
NPLOC4-207ENST00000572346 TIAM2Q8IVF5 1701 aa19.72■□□□□ 0.75
NPLOC4-207ENST00000572346 CCDC24Q8N4L8 307 aa19.72■□□□□ 0.75
NPLOC4-207ENST00000572346 PDZRN3Q9UPQ7 1066 aa19.72■□□□□ 0.75
NPLOC4-207ENST00000572346 BCORQ6W2J9 1755 aa19.72■□□□□ 0.75
NPLOC4-207ENST00000572346 GLTPD2A6NH11 291 aa19.71■□□□□ 0.75
NPLOC4-207ENST00000572346 PPP2R1AP30153 589 aa19.71■□□□□ 0.75
NPLOC4-207ENST00000572346 HTRA3P83110 453 aa19.71■□□□□ 0.75
NPLOC4-207ENST00000572346 ZNF622Q969S3 477 aaKnown RBP eCLIP19.71■□□□□ 0.754e-14■□□□□ 10.9
NPLOC4-207ENST00000572346 USP16Q9Y5T5 823 aa19.71■□□□□ 0.75
NPLOC4-207ENST00000572346 U2AF1L5P0DN76 240 aaPredicted RBP19.7■□□□□ 0.74
NPLOC4-207ENST00000572346 U2AF1Q01081 240 aaKnown RBP eCLIP19.7■□□□□ 0.742e-6■■■□□ 17.1
NPLOC4-207ENST00000572346 SETDB2Q96T68 719 aa19.7■□□□□ 0.74
NPLOC4-207ENST00000572346 PRAMEF22A3QJZ6 481 aa19.69■□□□□ 0.74
NPLOC4-207ENST00000572346 PIP4K2AP48426 406 aaPredicted RBP19.69■□□□□ 0.74
NPLOC4-207ENST00000572346 MCM10Q7L590 875 aa19.69■□□□□ 0.74
NPLOC4-207ENST00000572346 DZIP3Q86Y13 1208 aaKnown RBP19.69■□□□□ 0.74
NPLOC4-207ENST00000572346 CNBD1Q8NA66 436 aa19.69■□□□□ 0.74
NPLOC4-207ENST00000572346 FER1L6Q2WGJ9 1857 aa19.69■□□□□ 0.74
NPLOC4-207ENST00000572346 C21orf2O43822 256 aa19.68■□□□□ 0.74
NPLOC4-207ENST00000572346 SMC1BQ8NDV3 1235 aa19.68■□□□□ 0.74
NPLOC4-207ENST00000572346 RTF1Q92541 710 aaKnown RBP19.68■□□□□ 0.74
NPLOC4-207ENST00000572346 ZNF219Q9P2Y4 722 aaPredicted RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms