RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 COL15A1P39059 1388 aa27.13■■□□□ 1.93
CCDC40-206ENST00000572083 HSPA5P11021 654 aaKnown RBP27.13■■□□□ 1.93
CCDC40-206ENST00000572083 IL13P35225 146 aa27.13■■□□□ 1.93
CCDC40-206ENST00000572083 AKAP4Q5JQC9 854 aa27.13■■□□□ 1.93
CCDC40-206ENST00000572083 MRC1P22897 1456 aa27.13■■□□□ 1.93
CCDC40-206ENST00000572083 DLEC1Q9Y238 1755 aa27.12■■□□□ 1.93
CCDC40-206ENST00000572083 SLC39A6Q13433 755 aa27.12■■□□□ 1.93
CCDC40-206ENST00000572083 NFIXQ14938 502 aa27.12■■□□□ 1.93
CCDC40-206ENST00000572083 SMC1BQ8NDV3 1235 aa27.12■■□□□ 1.93
CCDC40-206ENST00000572083 LGR6Q9HBX8 967 aa27.12■■□□□ 1.93
CCDC40-206ENST00000572083 VIRMAQ69YN4 1812 aaKnown RBP27.11■■□□□ 1.93
CCDC40-206ENST00000572083 TIAM2Q8IVF5 1701 aa27.11■■□□□ 1.93
CCDC40-206ENST00000572083 CYP19A1P11511 503 aaPredicted RBP27.11■■□□□ 1.93
CCDC40-206ENST00000572083 EIF4G2P78344 907 aaKnown RBP eCLIP27.11■■□□□ 1.93
CCDC40-206ENST00000572083 ZBTB1Q9Y2K1 713 aa27.11■■□□□ 1.93
CCDC40-206ENST00000572083 NARFQ9UHQ1 456 aa27.1■■□□□ 1.93
CCDC40-206ENST00000572083 PRELPP51888 382 aa27.09■■□□□ 1.93
CCDC40-206ENST00000572083 ZC3H4Q9UPT8 1303 aaKnown RBP27.09■■□□□ 1.93
CCDC40-206ENST00000572083 RNMTO43148 476 aaKnown RBP27.07■■□□□ 1.92
CCDC40-206ENST00000572083 LMNB1P20700 586 aa27.07■■□□□ 1.92
CCDC40-206ENST00000572083 BCL2L12Q9HB09 334 aa27.07■■□□□ 1.92
CCDC40-206ENST00000572083 CARMIL3Q8ND23 1372 aa27.07■■□□□ 1.92
CCDC40-206ENST00000572083 CAPN15O75808 1086 aa27.06■■□□□ 1.92
CCDC40-206ENST00000572083 SERPINB2P05120 415 aa27.06■■□□□ 1.92
CCDC40-206ENST00000572083 KNSTRNQ9Y448 316 aa27.06■■□□□ 1.92
CCDC40-206ENST00000572083 HMOX1P09601 288 aa27.05■■□□□ 1.92
CCDC40-206ENST00000572083 GLTPD2A6NH11 291 aa27.04■■□□□ 1.92
CCDC40-206ENST00000572083 C2CD5Q86YS7 1000 aa27.04■■□□□ 1.92
CCDC40-206ENST00000572083 TTLL6Q8N841 843 aa27.04■■□□□ 1.92
CCDC40-206ENST00000572083 CCDC88AQ3V6T2 1871 aa27.03■■□□□ 1.92
CCDC40-206ENST00000572083 UBR2Q8IWV8 1755 aa27.03■■□□□ 1.92
CCDC40-206ENST00000572083 NFKBIEO00221 500 aa27.02■■□□□ 1.92
CCDC40-206ENST00000572083 VEGFAP15692 232 aaPredicted RBP27.02■■□□□ 1.92
CCDC40-206ENST00000572083 CANXP27824 592 aaKnown RBP27.02■■□□□ 1.92
CCDC40-206ENST00000572083 BICDL1Q6ZP65 573 aa27.01■■□□□ 1.91
CCDC40-206ENST00000572083 TNS4Q8IZW8 715 aa27.01■■□□□ 1.91
CCDC40-206ENST00000572083 CLSPNQ9HAW4 1339 aa27■■□□□ 1.91
CCDC40-206ENST00000572083 H0YIN7 160 aa27■■□□□ 1.91
CCDC40-206ENST00000572083 MTHFSDQ2M296 383 aaKnown RBP26.99■■□□□ 1.91
CCDC40-206ENST00000572083 PCGF6Q9BYE7 350 aa26.99■■□□□ 1.91
CCDC40-206ENST00000572083 ANKRD31Q8N7Z5 1873 aa26.98■■□□□ 1.91
CCDC40-206ENST00000572083 VSIG10Q8N0Z9 540 aa26.98■■□□□ 1.91
CCDC40-206ENST00000572083 COL11A2P13942 1736 aaPredicted RBP26.97■■□□□ 1.91
CCDC40-206ENST00000572083 AMER1Q5JTC6 1135 aaPredicted RBP26.97■■□□□ 1.91
CCDC40-206ENST00000572083 SCN7AQ01118 1682 aa26.97■■□□□ 1.91
CCDC40-206ENST00000572083 ZNF219Q9P2Y4 722 aaPredicted RBP26.96■■□□□ 1.91
CCDC40-206ENST00000572083 HSPA1AP0DMV8 641 aaKnown RBP26.95■■□□□ 1.9
CCDC40-206ENST00000572083 HSPA1BP0DMV9 641 aaKnown RBP26.95■■□□□ 1.9
CCDC40-206ENST00000572083 TBC1D9BQ66K14 1250 aa26.94■■□□□ 1.9
CCDC40-206ENST00000572083 TTC5Q8N0Z6 440 aa26.94■■□□□ 1.9
CCDC40-206ENST00000572083 ZNF622Q969S3 477 aaKnown RBP eCLIP26.94■■□□□ 1.9
CCDC40-206ENST00000572083 POTECB2RU33 542 aa26.93■■□□□ 1.9
CCDC40-206ENST00000572083 EIF5P55010 431 aaKnown RBP26.93■■□□□ 1.9
CCDC40-206ENST00000572083 CCDC24Q8N4L8 307 aa26.93■■□□□ 1.9
CCDC40-206ENST00000572083 ZNF330Q9Y3S2 320 aaPredicted RBP26.93■■□□□ 1.9
CCDC40-206ENST00000572083 STARD3NLO95772 234 aa26.92■■□□□ 1.9
CCDC40-206ENST00000572083 C21orf2O43822 256 aa26.91■■□□□ 1.9
CCDC40-206ENST00000572083 FER1L6Q2WGJ9 1857 aa26.91■■□□□ 1.9
CCDC40-206ENST00000572083 A0A087WZG4 1122 aa26.9■■□□□ 1.9
CCDC40-206ENST00000572083 DIAPH1O60610 1272 aaKnown RBP26.9■■□□□ 1.9
CCDC40-206ENST00000572083 DPY19L2Q6NUT2 758 aa26.9■■□□□ 1.9
CCDC40-206ENST00000572083 DICER1Q9UPY3 1922 aaKnown RBP26.9■■□□□ 1.9
CCDC40-206ENST00000572083 ERFEQ4G0M1 354 aa26.89■■□□□ 1.9
CCDC40-206ENST00000572083 PRR5LQ6MZQ0 368 aa26.89■■□□□ 1.9
CCDC40-206ENST00000572083 ZNF496Q96IT1 587 aaPredicted RBP26.89■■□□□ 1.9
CCDC40-206ENST00000572083 HEG1Q9ULI3 1381 aa26.88■■□□□ 1.89
CCDC40-206ENST00000572083 PDE6BP35913 854 aa26.88■■□□□ 1.89
CCDC40-206ENST00000572083 BRIP1Q9BX63 1249 aa26.88■■□□□ 1.89
CCDC40-206ENST00000572083 TBC1D2BQ9UPU7 963 aa26.88■■□□□ 1.89
CCDC40-206ENST00000572083 CACNA1SQ13698 1873 aa26.87■■□□□ 1.89
CCDC40-206ENST00000572083 SIPA1L3O60292 1781 aaPredicted RBP26.86■■□□□ 1.89
CCDC40-206ENST00000572083 TEFQ10587 303 aa26.85■■□□□ 1.89
CCDC40-206ENST00000572083 ZNF790Q6PG37 636 aa26.85■■□□□ 1.89
CCDC40-206ENST00000572083 PDZRN3Q9UPQ7 1066 aa26.85■■□□□ 1.89
CCDC40-206ENST00000572083 POTEIP0CG38 1075 aa26.84■■□□□ 1.89
CCDC40-206ENST00000572083 POTEJP0CG39 1038 aa26.84■■□□□ 1.89
CCDC40-206ENST00000572083 CC2D1BQ5T0F9 858 aaKnown RBP26.84■■□□□ 1.89
CCDC40-206ENST00000572083 TAOK3Q9H2K8 898 aa26.84■■□□□ 1.89
CCDC40-206ENST00000572083 KIF7Q2M1P5 1343 aa26.84■■□□□ 1.89
CCDC40-206ENST00000572083 COL3A1P02461 1466 aaPredicted RBP26.83■■□□□ 1.89
CCDC40-206ENST00000572083 CNBD1Q8NA66 436 aa26.83■■□□□ 1.89
CCDC40-206ENST00000572083 SLX4Q8IY92 1834 aa26.83■■□□□ 1.89
CCDC40-206ENST00000572083 BCORQ6W2J9 1755 aa26.82■■□□□ 1.88
CCDC40-206ENST00000572083 NPHP1O15259 732 aa26.82■■□□□ 1.88
CCDC40-206ENST00000572083 IL6STP40189 918 aaPredicted RBP26.82■■□□□ 1.88
CCDC40-206ENST00000572083 IL17REQ8NFR9 667 aa26.82■■□□□ 1.88
CCDC40-206ENST00000572083 LTBP3Q9NS15 1303 aa26.82■■□□□ 1.88
CCDC40-206ENST00000572083 DDNO94850 711 aaPredicted RBP26.81■■□□□ 1.88
CCDC40-206ENST00000572083 CHADLQ6NUI6 762 aa26.81■■□□□ 1.88
CCDC40-206ENST00000572083 TEX13AQ9BXU3 409 aaPredicted RBP26.81■■□□□ 1.88
CCDC40-206ENST00000572083 MKRN1Q9UHC7 482 aaKnown RBP26.81■■□□□ 1.88
CCDC40-206ENST00000572083 ARFGEF2Q9Y6D5 1785 aa26.81■■□□□ 1.88
CCDC40-206ENST00000572083 GNAT3A8MTJ3 354 aa26.8■■□□□ 1.88
CCDC40-206ENST00000572083 U2SURPO15042 1029 aaKnown RBP26.8■■□□□ 1.88
CCDC40-206ENST00000572083 CAMTA2O94983 1202 aa26.8■■□□□ 1.88
CCDC40-206ENST00000572083 A1BGP04217 495 aa26.8■■□□□ 1.88
CCDC40-206ENST00000572083 PRPF40BQ6NWY9 871 aaKnown RBP26.8■■□□□ 1.88
CCDC40-206ENST00000572083 SETDB2Q96T68 719 aa26.8■■□□□ 1.88
CCDC40-206ENST00000572083 CREBZFQ9NS37 354 aa26.8■■□□□ 1.88
CCDC40-206ENST00000572083 ST5P78524 1137 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms