RNA–Protein interactions for RNA: ENST00000571543.1

ABR-213, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-213ENST00000571543 HTATSF1O43719 755 aaKnown RBP27.79■■■□□ 2.04
ABR-213ENST00000571543 ZBTB1Q9Y2K1 713 aa27.79■■■□□ 2.04
ABR-213ENST00000571543 HEG1Q9ULI3 1381 aa27.78■■■□□ 2.04
ABR-213ENST00000571543 MYBBP1AQ9BQG0 1328 aaKnown RBP27.78■■■□□ 2.04
ABR-213ENST00000571543 USP42Q9H9J4 1324 aaKnown RBP27.78■■■□□ 2.04
ABR-213ENST00000571543 WWC3Q9ULE0 1092 aa27.78■■■□□ 2.04
ABR-213ENST00000571543 FMNL2Q96PY5 1086 aa27.77■■■□□ 2.04
ABR-213ENST00000571543 STARD3NLO95772 234 aa27.76■■■□□ 2.03
ABR-213ENST00000571543 PXDNLA1KZ92 1463 aa27.76■■■□□ 2.03
ABR-213ENST00000571543 CANXP27824 592 aaKnown RBP27.75■■■□□ 2.03
ABR-213ENST00000571543 FKBP8Q14318 412 aa27.75■■■□□ 2.03
ABR-213ENST00000571543 PNNQ9H307 717 aaKnown RBP27.75■■■□□ 2.03
ABR-213ENST00000571543 C10orf71Q711Q0 1435 aa27.75■■■□□ 2.03
ABR-213ENST00000571543 TEX13AQ9BXU3 409 aaPredicted RBP27.74■■■□□ 2.03
ABR-213ENST00000571543 ZPR1O75312 459 aa27.73■■■□□ 2.03
ABR-213ENST00000571543 NFE2L2Q16236 605 aa27.73■■■□□ 2.03
ABR-213ENST00000571543 PARP3Q9Y6F1 533 aa27.73■■■□□ 2.03
ABR-213ENST00000571543 COL15A1P39059 1388 aa27.73■■■□□ 2.03
ABR-213ENST00000571543 USPL1Q5W0Q7 1092 aa27.72■■■□□ 2.03
ABR-213ENST00000571543 ATP10DQ9P241 1426 aa27.72■■■□□ 2.03
ABR-213ENST00000571543 ADCY9O60503 1353 aa27.72■■■□□ 2.03
ABR-213ENST00000571543 MAPK8IP3Q9UPT6 1336 aa27.71■■■□□ 2.03
ABR-213ENST00000571543 C1QTNF8P60827 252 aa27.71■■■□□ 2.03
ABR-213ENST00000571543 DLG5Q8TDM6 1919 aa27.71■■■□□ 2.03
ABR-213ENST00000571543 GIGYF1O75420 1035 aaPredicted RBP27.7■■■□□ 2.02
ABR-213ENST00000571543 TAF7Q15545 349 aaPredicted RBP27.7■■■□□ 2.02
ABR-213ENST00000571543 NARFQ9UHQ1 456 aa27.7■■■□□ 2.02
ABR-213ENST00000571543 ARFGEF1Q9Y6D6 1849 aa27.69■■■□□ 2.02
ABR-213ENST00000571543 EIF5P55010 431 aaKnown RBP27.69■■■□□ 2.02
ABR-213ENST00000571543 PRKRIP1Q9H875 184 aaPredicted RBP27.69■■■□□ 2.02
ABR-213ENST00000571543 A1BGP04217 495 aa27.68■■■□□ 2.02
ABR-213ENST00000571543 DDR1Q08345 913 aa27.68■■■□□ 2.02
ABR-213ENST00000571543 MIS18AQ9NYP9 233 aa27.68■■■□□ 2.02
ABR-213ENST00000571543 AFDNP55196 1824 aaKnown RBP27.67■■■□□ 2.02
ABR-213ENST00000571543 THUMPD2Q9BTF0 503 aaKnown RBP27.67■■■□□ 2.02
ABR-213ENST00000571543 USP16Q9Y5T5 823 aa27.67■■■□□ 2.02
ABR-213ENST00000571543 PRAMEF22A3QJZ6 481 aa27.66■■■□□ 2.02
ABR-213ENST00000571543 TM4SF1P30408 202 aa27.66■■■□□ 2.02
ABR-213ENST00000571543 BCL2L12Q9HB09 334 aa27.65■■■□□ 2.02
ABR-213ENST00000571543 ZNF330Q9Y3S2 320 aaPredicted RBP27.65■■■□□ 2.02
ABR-213ENST00000571543 POLRMTO00411 1230 aaKnown RBP27.64■■■□□ 2.02
ABR-213ENST00000571543 SNRPA1P09661 255 aaKnown RBP27.64■■■□□ 2.02
ABR-213ENST00000571543 TGFB2P61812 414 aa27.64■■■□□ 2.02
ABR-213ENST00000571543 A0A087WZG4 1122 aa27.63■■■□□ 2.01
ABR-213ENST00000571543 IL6STP40189 918 aaPredicted RBP27.63■■■□□ 2.01
ABR-213ENST00000571543 SENP3-EIF4A1A0A087X0R7 540 aa27.62■■■□□ 2.01
ABR-213ENST00000571543 A0A0G2JLW4 131 aa27.62■■■□□ 2.01
ABR-213ENST00000571543 RIPK4P57078 832 aa27.62■■■□□ 2.01
ABR-213ENST00000571543 NFIXQ14938 502 aa27.62■■■□□ 2.01
ABR-213ENST00000571543 WDR43Q15061 677 aaKnown RBP eCLIP27.61■■■□□ 2.01
ABR-213ENST00000571543 CCDC146Q8IYE0 955 aa27.61■■■□□ 2.01
ABR-213ENST00000571543 PNISRQ8TF01 805 aaKnown RBP27.61■■■□□ 2.01
ABR-213ENST00000571543 TBC1D2BQ9UPU7 963 aa27.61■■■□□ 2.01
ABR-213ENST00000571543 NRXN2Q9P2S2 1712 aa27.61■■■□□ 2.01
ABR-213ENST00000571543 PIP4K2AP48426 406 aaPredicted RBP27.6■■■□□ 2.01
ABR-213ENST00000571543 DPEP1P16444 411 aa27.59■■■□□ 2.01
ABR-213ENST00000571543 TMPOP42166 694 aaKnown RBP27.59■■■□□ 2.01
ABR-213ENST00000571543 NPM2Q86SE8 214 aaKnown RBP27.58■■■□□ 2.01
ABR-213ENST00000571543 ADAMTS8Q9UP79 889 aa27.58■■■□□ 2.01
ABR-213ENST00000571543 DLEC1Q9Y238 1755 aa27.58■■■□□ 2
ABR-213ENST00000571543 BCS1LQ9Y276 419 aa27.57■■■□□ 2
ABR-213ENST00000571543 RRP7AQ9Y3A4 280 aaKnown RBP27.57■■■□□ 2
ABR-213ENST00000571543 BICDL1Q6ZP65 573 aa27.56■■■□□ 2
ABR-213ENST00000571543 ZNF526Q8TF50 670 aaPredicted RBP27.56■■■□□ 2
ABR-213ENST00000571543 GPBP1L1Q9HC44 474 aaPredicted RBP27.56■■■□□ 2
ABR-213ENST00000571543 SCN7AQ01118 1682 aa27.56■■■□□ 2
ABR-213ENST00000571543 KDM3BQ7LBC6 1761 aa27.55■■■□□ 2
ABR-213ENST00000571543 RUNDC1Q96C34 613 aa27.55■■■□□ 2
ABR-213ENST00000571543 ZNF316A6NFI3 1004 aaPredicted RBP27.54■■■□□ 2
ABR-213ENST00000571543 SERPINB2P05120 415 aa27.54■■■□□ 2
ABR-213ENST00000571543 KCNA3P22001 575 aa27.54■■■□□ 2
ABR-213ENST00000571543 EIF4A1P60842 406 aaKnown RBP27.54■■■□□ 2
ABR-213ENST00000571543 NEUROD2Q15784 382 aa27.54■■■□□ 2
ABR-213ENST00000571543 TBC1D9BQ66K14 1250 aa27.54■■■□□ 2
ABR-213ENST00000571543 NBPF26B4DH59 902 aa27.53■■■□□ 2
ABR-213ENST00000571543 CAMTA2O94983 1202 aa27.53■■■□□ 2
ABR-213ENST00000571543 NBPF10Q6P3W6 841 aaKnown RBP27.53■■■□□ 2
ABR-213ENST00000571543 DZIP3Q86Y13 1208 aaKnown RBP27.53■■■□□ 2
ABR-213ENST00000571543 NBPF15Q8N660 670 aa27.53■■■□□ 2
ABR-213ENST00000571543 CEP350Q5VT06 3117 aa27.53■■■□□ 2
ABR-213ENST00000571543 SBF1O95248 1867 aa27.53■■■□□ 2
ABR-213ENST00000571543 LMOD3Q0VAK6 560 aa27.52■■■□□ 2
ABR-213ENST00000571543 TSPYL4Q9UJ04 414 aa27.51■■□□□ 1.99
ABR-213ENST00000571543 CHRNA5P30532 468 aa27.5■■□□□ 1.99
ABR-213ENST00000571543 PIM2Q9P1W9 311 aa27.49■■□□□ 1.99
ABR-213ENST00000571543 BCORQ6W2J9 1755 aa27.48■■□□□ 1.99
ABR-213ENST00000571543 ANKRD31Q8N7Z5 1873 aa27.48■■□□□ 1.99
ABR-213ENST00000571543 TRIM35Q9UPQ4 493 aa27.47■■□□□ 1.99
ABR-213ENST00000571543 LAMB4A4D0S4 1761 aa27.46■■□□□ 1.99
ABR-213ENST00000571543 ARHGAP27Q6ZUM4 889 aa27.46■■□□□ 1.99
ABR-213ENST00000571543 SETDB2Q96T68 719 aa27.46■■□□□ 1.99
ABR-213ENST00000571543 BABAM1Q9NWV8 329 aa27.45■■□□□ 1.98
ABR-213ENST00000571543 CARMIL3Q8ND23 1372 aa27.45■■□□□ 1.98
ABR-213ENST00000571543 DALRD3Q5D0E6 543 aaKnown RBP27.44■■□□□ 1.98
ABR-213ENST00000571543 CCDC88AQ3V6T2 1871 aa27.43■■□□□ 1.98
ABR-213ENST00000571543 CCDC184Q52MB2 194 aa27.43■■□□□ 1.98
ABR-213ENST00000571543 CLEC4GQ6UXB4 293 aa27.43■■□□□ 1.98
ABR-213ENST00000571543 NGEFQ8N5V2 710 aa27.43■■□□□ 1.98
ABR-213ENST00000571543 COL11A2P13942 1736 aaPredicted RBP27.42■■□□□ 1.98
ABR-213ENST00000571543 PRR5LQ6MZQ0 368 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms