RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 COL15A1P39059 1388 aa22.88■■□□□ 1.25
RPA1-203ENST00000571058 MAPK8IP3Q9UPT6 1336 aa22.87■■□□□ 1.25
RPA1-203ENST00000571058 MCM10Q7L590 875 aa22.87■■□□□ 1.25
RPA1-203ENST00000571058 PLEKHF1Q96S99 279 aa22.87■■□□□ 1.25
RPA1-203ENST00000571058 A0A087WZG4 1122 aa22.86■■□□□ 1.25
RPA1-203ENST00000571058 TGFB2P61812 414 aa22.86■■□□□ 1.25
RPA1-203ENST00000571058 SRP68Q9UHB9 627 aaKnown RBP22.86■■□□□ 1.25
RPA1-203ENST00000571058 NARFQ9UHQ1 456 aa22.86■■□□□ 1.25
RPA1-203ENST00000571058 C10orf71Q711Q0 1435 aa22.85■■□□□ 1.25
RPA1-203ENST00000571058 YBX3P16989 372 aaKnown RBP eCLIP22.85■■□□□ 1.255e-7■■□□□ 12.4
RPA1-203ENST00000571058 GOLGB1Q14789 3259 aaKnown RBP22.85■■□□□ 1.25
RPA1-203ENST00000571058 FKBP8Q14318 412 aa22.84■■□□□ 1.25
RPA1-203ENST00000571058 TAF7Q15545 349 aaPredicted RBP22.84■■□□□ 1.25
RPA1-203ENST00000571058 NFE2L2Q16236 605 aa22.84■■□□□ 1.25
RPA1-203ENST00000571058 DLG5Q8TDM6 1919 aa22.84■■□□□ 1.25
RPA1-203ENST00000571058 CANXP27824 592 aaKnown RBP22.83■■□□□ 1.25
RPA1-203ENST00000571058 EIF5P55010 431 aaKnown RBP22.83■■□□□ 1.25
RPA1-203ENST00000571058 USPL1Q5W0Q7 1092 aa22.83■■□□□ 1.25
RPA1-203ENST00000571058 PNISRQ8TF01 805 aaKnown RBP22.83■■□□□ 1.25
RPA1-203ENST00000571058 IL6STP40189 918 aaPredicted RBP22.82■■□□□ 1.24
RPA1-203ENST00000571058 NPM2Q86SE8 214 aaKnown RBP22.82■■□□□ 1.24
RPA1-203ENST00000571058 SNRPA1P09661 255 aaKnown RBP22.81■■□□□ 1.24
RPA1-203ENST00000571058 TM4SF1P30408 202 aa22.81■■□□□ 1.24
RPA1-203ENST00000571058 DCTN1Q14203 1278 aa22.81■■□□□ 1.24
RPA1-203ENST00000571058 PXDNLA1KZ92 1463 aa22.8■■□□□ 1.24
RPA1-203ENST00000571058 KCNQ3O43525 872 aa22.8■■□□□ 1.24
RPA1-203ENST00000571058 POLRMTO00411 1230 aaKnown RBP22.78■■□□□ 1.24
RPA1-203ENST00000571058 DDR1Q08345 913 aa22.78■■□□□ 1.24
RPA1-203ENST00000571058 KIAA1551Q9HCM1 1747 aa22.77■■□□□ 1.24
RPA1-203ENST00000571058 ZNF784Q8NCA9 323 aaPredicted RBP22.77■■□□□ 1.24
RPA1-203ENST00000571058 PRKRIP1Q9H875 184 aaPredicted RBP22.77■■□□□ 1.24
RPA1-203ENST00000571058 LMOD3Q0VAK6 560 aa22.76■■□□□ 1.23
RPA1-203ENST00000571058 NFIXQ14938 502 aa22.76■■□□□ 1.23
RPA1-203ENST00000571058 WDR43Q15061 677 aaKnown RBP eCLIP22.76■■□□□ 1.23
RPA1-203ENST00000571058 A1BGP04217 495 aa22.75■■□□□ 1.23
RPA1-203ENST00000571058 BCL2L12Q9HB09 334 aa22.75■■□□□ 1.23
RPA1-203ENST00000571058 USP16Q9Y5T5 823 aa22.75■■□□□ 1.23
RPA1-203ENST00000571058 N4BP2Q86UW6 1770 aaPredicted RBP22.75■■□□□ 1.23
RPA1-203ENST00000571058 ZNF330Q9Y3S2 320 aaPredicted RBP22.74■■□□□ 1.23
RPA1-203ENST00000571058 SCN7AQ01118 1682 aa22.74■■□□□ 1.23
RPA1-203ENST00000571058 KDM3BQ7LBC6 1761 aa22.73■■□□□ 1.23
RPA1-203ENST00000571058 A0A0G2JLW4 131 aa22.73■■□□□ 1.23
RPA1-203ENST00000571058 DPEP1P16444 411 aa22.73■■□□□ 1.23
RPA1-203ENST00000571058 RIPK4P57078 832 aa22.73■■□□□ 1.23
RPA1-203ENST00000571058 NRXN2Q9P2S2 1712 aa22.72■■□□□ 1.23
RPA1-203ENST00000571058 BABAM1Q9NWV8 329 aa22.72■■□□□ 1.23
RPA1-203ENST00000571058 BRCA1P38398 1863 aaKnown RBP22.72■■□□□ 1.23
RPA1-203ENST00000571058 AFDNP55196 1824 aaKnown RBP22.71■■□□□ 1.23
RPA1-203ENST00000571058 RGL2O15211 777 aa22.71■■□□□ 1.23
RPA1-203ENST00000571058 SERPINB2P05120 415 aa22.71■■□□□ 1.23
RPA1-203ENST00000571058 TMPOP42166 694 aaKnown RBP22.71■■□□□ 1.23
RPA1-203ENST00000571058 PIM2Q9P1W9 311 aa22.71■■□□□ 1.23
RPA1-203ENST00000571058 TBC1D2BQ9UPU7 963 aa22.71■■□□□ 1.23
RPA1-203ENST00000571058 LAMB4A4D0S4 1761 aa22.71■■□□□ 1.23
RPA1-203ENST00000571058 RUNDC1Q96C34 613 aa22.7■■□□□ 1.22
RPA1-203ENST00000571058 MIS18AQ9NYP9 233 aa22.7■■□□□ 1.22
RPA1-203ENST00000571058 BCS1LQ9Y276 419 aa22.7■■□□□ 1.22
RPA1-203ENST00000571058 PRAMEF22A3QJZ6 481 aa22.69■■□□□ 1.22
RPA1-203ENST00000571058 DZIP3Q86Y13 1208 aaKnown RBP22.69■■□□□ 1.22
RPA1-203ENST00000571058 THUMPD2Q9BTF0 503 aaKnown RBP22.69■■□□□ 1.22
RPA1-203ENST00000571058 WWC3Q9ULE0 1092 aa22.69■■□□□ 1.22
RPA1-203ENST00000571058 CARMIL3Q8ND23 1372 aa22.68■■□□□ 1.22
RPA1-203ENST00000571058 GIGYF1O75420 1035 aaPredicted RBP22.68■■□□□ 1.22
RPA1-203ENST00000571058 CAMTA2O94983 1202 aa22.68■■□□□ 1.22
RPA1-203ENST00000571058 KCNA3P22001 575 aa22.68■■□□□ 1.22
RPA1-203ENST00000571058 EIF4A1P60842 406 aaKnown RBP22.68■■□□□ 1.22
RPA1-203ENST00000571058 CLEC4GQ6UXB4 293 aa22.68■■□□□ 1.22
RPA1-203ENST00000571058 ZNF652Q9Y2D9 606 aa22.68■■□□□ 1.22
RPA1-203ENST00000571058 BCORQ6W2J9 1755 aa22.68■■□□□ 1.22
RPA1-203ENST00000571058 ARFGEF1Q9Y6D6 1849 aa22.67■■□□□ 1.22
RPA1-203ENST00000571058 PDZRN3Q9UPQ7 1066 aa22.67■■□□□ 1.22
RPA1-203ENST00000571058 DALRD3Q5D0E6 543 aaKnown RBP22.66■■□□□ 1.22
RPA1-203ENST00000571058 TBC1D9BQ66K14 1250 aa22.66■■□□□ 1.22
RPA1-203ENST00000571058 BICDL1Q6ZP65 573 aa22.66■■□□□ 1.22
RPA1-203ENST00000571058 SETDB2Q96T68 719 aa22.66■■□□□ 1.22
RPA1-203ENST00000571058 ADAMTS8Q9UP79 889 aa22.66■■□□□ 1.22
RPA1-203ENST00000571058 TSPYL4Q9UJ04 414 aa22.65■■□□□ 1.22
RPA1-203ENST00000571058 NBPF26B4DH59 902 aa22.64■■□□□ 1.21
RPA1-203ENST00000571058 NBPF10Q6P3W6 841 aaKnown RBP22.64■■□□□ 1.21
RPA1-203ENST00000571058 CCDC146Q8IYE0 955 aa22.64■■□□□ 1.21
RPA1-203ENST00000571058 NBPF15Q8N660 670 aa22.64■■□□□ 1.21
RPA1-203ENST00000571058 PIP4K2AP48426 406 aaPredicted RBP22.63■■□□□ 1.21
RPA1-203ENST00000571058 ADCY9O60503 1353 aa22.63■■□□□ 1.21
RPA1-203ENST00000571058 ERBB4Q15303 1308 aa22.62■■□□□ 1.21
RPA1-203ENST00000571058 ZNF316A6NFI3 1004 aaPredicted RBP22.62■■□□□ 1.21
RPA1-203ENST00000571058 CHRNA5P30532 468 aa22.62■■□□□ 1.21
RPA1-203ENST00000571058 DLEC1Q9Y238 1755 aa22.61■■□□□ 1.21
RPA1-203ENST00000571058 H0YIN7 160 aa22.61■■□□□ 1.21
RPA1-203ENST00000571058 PDE6BP35913 854 aa22.61■■□□□ 1.21
RPA1-203ENST00000571058 ARHGAP27Q6ZUM4 889 aa22.61■■□□□ 1.21
RPA1-203ENST00000571058 BRIP1Q9BX63 1249 aa22.61■■□□□ 1.21
RPA1-203ENST00000571058 ATP10DQ9P241 1426 aa22.6■■□□□ 1.21
RPA1-203ENST00000571058 NPHP1O15259 732 aa22.6■■□□□ 1.21
RPA1-203ENST00000571058 NEUROD2Q15784 382 aa22.6■■□□□ 1.21
RPA1-203ENST00000571058 CNBD1Q8NA66 436 aa22.6■■□□□ 1.21
RPA1-203ENST00000571058 RRP7AQ9Y3A4 280 aaKnown RBP22.6■■□□□ 1.21
RPA1-203ENST00000571058 ST5P78524 1137 aa22.59■■□□□ 1.21
RPA1-203ENST00000571058 PRR5LQ6MZQ0 368 aa22.59■■□□□ 1.21
RPA1-203ENST00000571058 C2CD5Q86YS7 1000 aa22.59■■□□□ 1.21
RPA1-203ENST00000571058 ERVV-1B6SEH8 477 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms