RNA–Protein interactions for RNA: ENST00000571011.1

TRAP1-205, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-205ENST00000571011 USPL1Q5W0Q7 1092 aa28.46■■■□□ 2.15
TRAP1-205ENST00000571011 NARFQ9UHQ1 456 aa28.46■■■□□ 2.15
TRAP1-205ENST00000571011 DPEP1P16444 411 aa28.45■■■□□ 2.14
TRAP1-205ENST00000571011 ZNF496Q96IT1 587 aaPredicted RBP28.45■■■□□ 2.14
TRAP1-205ENST00000571011 TEX13AQ9BXU3 409 aaPredicted RBP28.45■■■□□ 2.14
TRAP1-205ENST00000571011 COL15A1P39059 1388 aa28.45■■■□□ 2.14
TRAP1-205ENST00000571011 N4BP2Q86UW6 1770 aaPredicted RBP28.45■■■□□ 2.14
TRAP1-205ENST00000571011 GIGYF1O75420 1035 aaPredicted RBP28.44■■■□□ 2.14
TRAP1-205ENST00000571011 SIPA1L3O60292 1781 aaPredicted RBP28.44■■■□□ 2.14
TRAP1-205ENST00000571011 ATP10DQ9P241 1426 aa28.43■■■□□ 2.14
TRAP1-205ENST00000571011 ADCY9O60503 1353 aa28.43■■■□□ 2.14
TRAP1-205ENST00000571011 HEG1Q9ULI3 1381 aa28.43■■■□□ 2.14
TRAP1-205ENST00000571011 POLRMTO00411 1230 aaKnown RBP28.43■■■□□ 2.14
TRAP1-205ENST00000571011 BCS1LQ9Y276 419 aa28.42■■■□□ 2.14
TRAP1-205ENST00000571011 KCNA3P22001 575 aa28.41■■■□□ 2.14
TRAP1-205ENST00000571011 CANXP27824 592 aaKnown RBP28.4■■■□□ 2.14
TRAP1-205ENST00000571011 EIF5P55010 431 aaKnown RBP28.4■■■□□ 2.14
TRAP1-205ENST00000571011 FMNL2Q96PY5 1086 aa28.4■■■□□ 2.14
TRAP1-205ENST00000571011 BTBD11A6QL63 1104 aa28.39■■■□□ 2.14
TRAP1-205ENST00000571011 A0A087WZG4 1122 aa28.38■■■□□ 2.13
TRAP1-205ENST00000571011 RTF1Q92541 710 aaKnown RBP28.38■■■□□ 2.13
TRAP1-205ENST00000571011 BCL2L12Q9HB09 334 aa28.38■■■□□ 2.13
TRAP1-205ENST00000571011 NFIXQ14938 502 aa28.37■■■□□ 2.13
TRAP1-205ENST00000571011 PIM2Q9P1W9 311 aa28.37■■■□□ 2.13
TRAP1-205ENST00000571011 BRCA1P38398 1863 aaKnown RBP28.36■■■□□ 2.13
TRAP1-205ENST00000571011 HTATSF1O43719 755 aaKnown RBP28.36■■■□□ 2.13
TRAP1-205ENST00000571011 KCNQ3O43525 872 aa28.35■■■□□ 2.13
TRAP1-205ENST00000571011 GPBP1L1Q9HC44 474 aaPredicted RBP28.35■■■□□ 2.13
TRAP1-205ENST00000571011 IL6STP40189 918 aaPredicted RBP28.33■■■□□ 2.13
TRAP1-205ENST00000571011 ARHGAP27Q6ZUM4 889 aa28.33■■■□□ 2.13
TRAP1-205ENST00000571011 MCM10Q7L590 875 aa28.33■■■□□ 2.13
TRAP1-205ENST00000571011 DALRD3Q5D0E6 543 aaKnown RBP28.32■■■□□ 2.12
TRAP1-205ENST00000571011 SERPINB2P05120 415 aa28.31■■■□□ 2.12
TRAP1-205ENST00000571011 A1BGP04217 495 aa28.3■■■□□ 2.12
TRAP1-205ENST00000571011 CHRNA5P30532 468 aa28.3■■■□□ 2.12
TRAP1-205ENST00000571011 AFDNP55196 1824 aaKnown RBP28.29■■■□□ 2.12
TRAP1-205ENST00000571011 ARFGEF1Q9Y6D6 1849 aa28.29■■■□□ 2.12
TRAP1-205ENST00000571011 NRXN2Q9P2S2 1712 aa28.29■■■□□ 2.12
TRAP1-205ENST00000571011 DCTN1Q14203 1278 aa28.28■■■□□ 2.12
TRAP1-205ENST00000571011 ZNF526Q8TF50 670 aaPredicted RBP28.28■■■□□ 2.12
TRAP1-205ENST00000571011 SENP3-EIF4A1A0A087X0R7 540 aa28.27■■■□□ 2.12
TRAP1-205ENST00000571011 NEFMP07197 916 aa28.27■■■□□ 2.12
TRAP1-205ENST00000571011 NPM2Q86SE8 214 aaKnown RBP28.27■■■□□ 2.12
TRAP1-205ENST00000571011 TBC1D2BQ9UPU7 963 aa28.27■■■□□ 2.12
TRAP1-205ENST00000571011 USP16Q9Y5T5 823 aa28.27■■■□□ 2.12
TRAP1-205ENST00000571011 SNRPA1P09661 255 aaKnown RBP28.26■■■□□ 2.11
TRAP1-205ENST00000571011 TAF7Q15545 349 aaPredicted RBP28.26■■■□□ 2.11
TRAP1-205ENST00000571011 ZNF330Q9Y3S2 320 aaPredicted RBP28.26■■■□□ 2.11
TRAP1-205ENST00000571011 TBC1D9BQ66K14 1250 aa28.25■■■□□ 2.11
TRAP1-205ENST00000571011 PLEKHF1Q96S99 279 aa28.25■■■□□ 2.11
TRAP1-205ENST00000571011 BICDL1Q6ZP65 573 aa28.24■■■□□ 2.11
TRAP1-205ENST00000571011 CEP350Q5VT06 3117 aa28.24■■■□□ 2.11
TRAP1-205ENST00000571011 PNNQ9H307 717 aaKnown RBP28.23■■■□□ 2.11
TRAP1-205ENST00000571011 PRAMEF22A3QJZ6 481 aa28.22■■■□□ 2.11
TRAP1-205ENST00000571011 CAMTA2O94983 1202 aa28.22■■■□□ 2.11
TRAP1-205ENST00000571011 RALBP1Q15311 655 aa28.22■■■□□ 2.11
TRAP1-205ENST00000571011 SCN7AQ01118 1682 aa28.21■■■□□ 2.11
TRAP1-205ENST00000571011 C9orf131Q5VYM1 1079 aa28.2■■■□□ 2.1
TRAP1-205ENST00000571011 NFE2L2Q16236 605 aa28.19■■■□□ 2.1
TRAP1-205ENST00000571011 DZIP3Q86Y13 1208 aaKnown RBP28.19■■■□□ 2.1
TRAP1-205ENST00000571011 C2CD5Q86YS7 1000 aa28.19■■■□□ 2.1
TRAP1-205ENST00000571011 CARMIL3Q8ND23 1372 aa28.19■■■□□ 2.1
TRAP1-205ENST00000571011 H0YIN7 160 aa28.18■■■□□ 2.1
TRAP1-205ENST00000571011 TTLL6Q8N841 843 aa28.18■■■□□ 2.1
TRAP1-205ENST00000571011 PNISRQ8TF01 805 aaKnown RBP28.18■■■□□ 2.1
TRAP1-205ENST00000571011 SETDB2Q96T68 719 aa28.18■■■□□ 2.1
TRAP1-205ENST00000571011 PDZRN3Q9UPQ7 1066 aa28.18■■■□□ 2.1
TRAP1-205ENST00000571011 KIF3CO14782 793 aa28.17■■■□□ 2.1
TRAP1-205ENST00000571011 CLEC4GQ6UXB4 293 aa28.17■■■□□ 2.1
TRAP1-205ENST00000571011 BRIP1Q9BX63 1249 aa28.17■■■□□ 2.1
TRAP1-205ENST00000571011 MIS18AQ9NYP9 233 aa28.17■■■□□ 2.1
TRAP1-205ENST00000571011 DLG5Q8TDM6 1919 aa28.16■■■□□ 2.1
TRAP1-205ENST00000571011 PIP4K2AP48426 406 aaPredicted RBP28.16■■■□□ 2.1
TRAP1-205ENST00000571011 PRR5LQ6MZQ0 368 aa28.16■■■□□ 2.1
TRAP1-205ENST00000571011 DLEC1Q9Y238 1755 aa28.15■■■□□ 2.1
TRAP1-205ENST00000571011 PDE6BP35913 854 aa28.15■■■□□ 2.1
TRAP1-205ENST00000571011 MAPK8IP3Q9UPT6 1336 aa28.15■■■□□ 2.1
TRAP1-205ENST00000571011 NBPF26B4DH59 902 aa28.14■■■□□ 2.1
TRAP1-205ENST00000571011 DDX10Q13206 875 aaKnown RBP28.14■■■□□ 2.1
TRAP1-205ENST00000571011 NBPF10Q6P3W6 841 aaKnown RBP28.14■■■□□ 2.1
TRAP1-205ENST00000571011 NBPF15Q8N660 670 aa28.14■■■□□ 2.1
TRAP1-205ENST00000571011 RGL2O15211 777 aa28.13■■■□□ 2.09
TRAP1-205ENST00000571011 RNF181Q9P0P0 153 aa28.13■■■□□ 2.09
TRAP1-205ENST00000571011 BCORQ6W2J9 1755 aa28.12■■■□□ 2.09
TRAP1-205ENST00000571011 CNBD1Q8NA66 436 aa28.12■■■□□ 2.09
TRAP1-205ENST00000571011 ZNF652Q9Y2D9 606 aa28.12■■■□□ 2.09
TRAP1-205ENST00000571011 SBF1O95248 1867 aa28.1■■■□□ 2.09
TRAP1-205ENST00000571011 ANKRD31Q8N7Z5 1873 aa28.1■■■□□ 2.09
TRAP1-205ENST00000571011 EIF4A1P60842 406 aaKnown RBP28.09■■■□□ 2.09
TRAP1-205ENST00000571011 CCDC24Q8N4L8 307 aa28.09■■■□□ 2.09
TRAP1-205ENST00000571011 THUMPD2Q9BTF0 503 aaKnown RBP28.09■■■□□ 2.09
TRAP1-205ENST00000571011 ST5P78524 1137 aa28.08■■■□□ 2.09
TRAP1-205ENST00000571011 ZNF622Q969S3 477 aaKnown RBP eCLIP28.08■■■□□ 2.09
TRAP1-205ENST00000571011 KDM3BQ7LBC6 1761 aa28.08■■■□□ 2.09
TRAP1-205ENST00000571011 NPHP1O15259 732 aa28.07■■■□□ 2.08
TRAP1-205ENST00000571011 HSPA6P17066 643 aa28.07■■■□□ 2.08
TRAP1-205ENST00000571011 NMRK2Q9NPI5 230 aa28.07■■■□□ 2.08
TRAP1-205ENST00000571011 MYBBP1AQ9BQG0 1328 aaKnown RBP28.07■■■□□ 2.08
TRAP1-205ENST00000571011 LMNB1P20700 586 aa28.06■■■□□ 2.08
TRAP1-205ENST00000571011 RASSF7Q02833 373 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms