RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 LMNB1P20700 586 aa10.18□□□□□ -0.78
SMG6-205ENST00000570659 EIF4A2Q14240 407 aaKnown RBP10.18□□□□□ -0.78
SMG6-205ENST00000570659 USPL1Q5W0Q7 1092 aa10.18□□□□□ -0.78
SMG6-205ENST00000570659 IFNL2Q8IZJ0 200 aa10.18□□□□□ -0.78
SMG6-205ENST00000570659 ABHD8Q96I13 439 aa10.18□□□□□ -0.78
SMG6-205ENST00000570659 ZNF219Q9P2Y4 722 aaPredicted RBP10.18□□□□□ -0.78
SMG6-205ENST00000570659 SPG7Q9UQ90 795 aa10.18□□□□□ -0.78
SMG6-205ENST00000570659 CACNA1SQ13698 1873 aa10.17□□□□□ -0.78
SMG6-205ENST00000570659 ADAMTSL1Q8N6G6 1762 aa10.17□□□□□ -0.78
SMG6-205ENST00000570659 HSPA8P11142 646 aaKnown RBP10.17□□□□□ -0.78
SMG6-205ENST00000570659 FMR1Q06787 632 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMG6-205ENST00000570659 AEBP1Q8IUX7 1158 aa10.17□□□□□ -0.78
SMG6-205ENST00000570659 POLKQ9UBT6 870 aa10.17□□□□□ -0.78
SMG6-205ENST00000570659 SLX4Q8IY92 1834 aa10.17□□□□□ -0.78
SMG6-205ENST00000570659 WASHC2AQ641Q2 1341 aa10.16□□□□□ -0.78
SMG6-205ENST00000570659 DDNO94850 711 aaPredicted RBP10.16□□□□□ -0.78
SMG6-205ENST00000570659 SLC51AQ86UW1 340 aa10.16□□□□□ -0.78
SMG6-205ENST00000570659 DNAJC10Q8IXB1 793 aa10.16□□□□□ -0.78
SMG6-205ENST00000570659 PRDM10Q9NQV6 1147 aa10.16□□□□□ -0.78
SMG6-205ENST00000570659 CREBZFQ9NS37 354 aa10.16□□□□□ -0.78
SMG6-205ENST00000570659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.16□□□□□ -0.78
SMG6-205ENST00000570659 KIF24Q5T7B8 1368 aa10.15□□□□□ -0.78
SMG6-205ENST00000570659 SOS1Q07889 1333 aaPredicted RBP10.15□□□□□ -0.78
SMG6-205ENST00000570659 ITGBL1O95965 494 aaPredicted RBP10.15□□□□□ -0.78
SMG6-205ENST00000570659 CHADLQ6NUI6 762 aa10.15□□□□□ -0.78
SMG6-205ENST00000570659 WBP1LQ9NX94 342 aa10.15□□□□□ -0.78
SMG6-205ENST00000570659 SCN11AQ9UI33 1791 aa10.14□□□□□ -0.79
SMG6-205ENST00000570659 NFATC2IPQ8NCF5 419 aa10.14□□□□□ -0.79
SMG6-205ENST00000570659 LTBP1Q14766 1721 aa10.13□□□□□ -0.79
SMG6-205ENST00000570659 ZC3H4Q9UPT8 1303 aaKnown RBP10.13□□□□□ -0.79
SMG6-205ENST00000570659 ERVV-2B6SEH9 535 aa10.13□□□□□ -0.79
SMG6-205ENST00000570659 C21orf2O43822 256 aa10.13□□□□□ -0.79
SMG6-205ENST00000570659 OLFM4Q6UX06 510 aa10.13□□□□□ -0.79
SMG6-205ENST00000570659 C2CD5Q86YS7 1000 aa10.13□□□□□ -0.79
SMG6-205ENST00000570659 TSKSQ9UJT2 592 aa10.13□□□□□ -0.79
SMG6-205ENST00000570659 ZBTB1Q9Y2K1 713 aa10.13□□□□□ -0.79
SMG6-205ENST00000570659 COL4A5P29400 1685 aa10.12□□□□□ -0.79
SMG6-205ENST00000570659 ZNF541Q9H0D2 1346 aa10.12□□□□□ -0.79
SMG6-205ENST00000570659 THSD7BQ9C0I4 1608 aa10.12□□□□□ -0.79
SMG6-205ENST00000570659 SERPINB2P05120 415 aa10.12□□□□□ -0.79
SMG6-205ENST00000570659 TNNT2P45379 298 aaPredicted RBP10.12□□□□□ -0.79
SMG6-205ENST00000570659 CTCFP49711 727 aaPredicted RBP10.12□□□□□ -0.79
SMG6-205ENST00000570659 CABP4P57796 275 aa10.12□□□□□ -0.79
SMG6-205ENST00000570659 SLC39A6Q13433 755 aa10.12□□□□□ -0.79
SMG6-205ENST00000570659 ZNF530Q6P9A1 599 aaPredicted RBP10.12□□□□□ -0.79
SMG6-205ENST00000570659 TTLL6Q8N841 843 aa10.12□□□□□ -0.79
SMG6-205ENST00000570659 CYP19A1P11511 503 aaPredicted RBP10.11□□□□□ -0.79
SMG6-205ENST00000570659 BICDL1Q6ZP65 573 aa10.11□□□□□ -0.79
SMG6-205ENST00000570659 LGR6Q9HBX8 967 aa10.11□□□□□ -0.79
SMG6-205ENST00000570659 ERFEQ4G0M1 354 aa10.1□□□□□ -0.79
SMG6-205ENST00000570659 TAF1DQ9H5J8 278 aaPredicted RBP10.1□□□□□ -0.79
SMG6-205ENST00000570659 COL15A1P39059 1388 aa10.1□□□□□ -0.79
SMG6-205ENST00000570659 SCN7AQ01118 1682 aa10.09□□□□□ -0.79
SMG6-205ENST00000570659 RGS19P49795 217 aa10.09□□□□□ -0.79
SMG6-205ENST00000570659 TBC1D9BQ66K14 1250 aa10.09□□□□□ -0.79
SMG6-205ENST00000570659 MAP1SQ66K74 1059 aaPredicted RBP10.09□□□□□ -0.79
SMG6-205ENST00000570659 NARFQ9UHQ1 456 aa10.09□□□□□ -0.79
SMG6-205ENST00000570659 UBR2Q8IWV8 1755 aa10.09□□□□□ -0.79
SMG6-205ENST00000570659 ARFGEF2Q9Y6D5 1785 aa10.09□□□□□ -0.79
SMG6-205ENST00000570659 CCDC85CA6NKD9 419 aa10.08□□□□□ -0.8
SMG6-205ENST00000570659 HMGB2P26583 209 aaKnown RBP10.08□□□□□ -0.8
SMG6-205ENST00000570659 MRC1P22897 1456 aa10.08□□□□□ -0.8
SMG6-205ENST00000570659 SCN4AP35499 1836 aa10.07□□□□□ -0.8
SMG6-205ENST00000570659 RASSF10A6NK89 507 aa10.07□□□□□ -0.8
SMG6-205ENST00000570659 MTHFSP49914 203 aa10.07□□□□□ -0.8
SMG6-205ENST00000570659 PRR5LQ6MZQ0 368 aa10.07□□□□□ -0.8
SMG6-205ENST00000570659 ZNF622Q969S3 477 aaKnown RBP eCLIP10.07□□□□□ -0.8
SMG6-205ENST00000570659 CASP8AP2Q9UKL3 1982 aa10.06□□□□□ -0.8
SMG6-205ENST00000570659 TMEM88BA6NKF7 163 aa10.06□□□□□ -0.8
SMG6-205ENST00000570659 ZPR1O75312 459 aa10.06□□□□□ -0.8
SMG6-205ENST00000570659 MLLT1Q03111 559 aaPredicted RBP10.06□□□□□ -0.8
SMG6-205ENST00000570659 C7orf43Q8WVR3 580 aa10.06□□□□□ -0.8
SMG6-205ENST00000570659 L3MBTL3Q96JM7 780 aaPredicted RBP10.06□□□□□ -0.8
SMG6-205ENST00000570659 WDR33Q9C0J8 1336 aaKnown RBP10.06□□□□□ -0.8
SMG6-205ENST00000570659 H0YIN7 160 aa10.05□□□□□ -0.8
SMG6-205ENST00000570659 AOC2O75106 756 aa10.05□□□□□ -0.8
SMG6-205ENST00000570659 CANXP27824 592 aaKnown RBP10.05□□□□□ -0.8
SMG6-205ENST00000570659 EAPPQ56P03 285 aaPredicted RBP10.05□□□□□ -0.8
SMG6-205ENST00000570659 PRPF40BQ6NWY9 871 aaKnown RBP10.05□□□□□ -0.8
SMG6-205ENST00000570659 LDHDQ86WU2 507 aa10.05□□□□□ -0.8
SMG6-205ENST00000570659 SNED1Q8TER0 1413 aa10.05□□□□□ -0.8
SMG6-205ENST00000570659 RNF123Q5XPI4 1314 aa10.05□□□□□ -0.8
SMG6-205ENST00000570659 LTBP3Q9NS15 1303 aa10.05□□□□□ -0.8
SMG6-205ENST00000570659 TRAF5O00463 557 aa10.04□□□□□ -0.8
SMG6-205ENST00000570659 PLEKHO1Q53GL0 409 aaPredicted RBP10.04□□□□□ -0.8
SMG6-205ENST00000570659 CYP4F22Q6NT55 531 aa10.04□□□□□ -0.8
SMG6-205ENST00000570659 DPY19L2Q6NUT2 758 aa10.04□□□□□ -0.8
SMG6-205ENST00000570659 AIDAQ96BJ3 306 aa10.04□□□□□ -0.8
SMG6-205ENST00000570659 ZIC5Q96T25 663 aa10.04□□□□□ -0.8
SMG6-205ENST00000570659 TAOK3Q9H2K8 898 aa10.04□□□□□ -0.8
SMG6-205ENST00000570659 ZNF277Q9NRM2 450 aaPredicted RBP10.04□□□□□ -0.8
SMG6-205ENST00000570659 BCORQ6W2J9 1755 aa10.03□□□□□ -0.8
SMG6-205ENST00000570659 PIP4K2AP48426 406 aaPredicted RBP10.03□□□□□ -0.8
SMG6-205ENST00000570659 EIF5P55010 431 aaKnown RBP10.03□□□□□ -0.8
SMG6-205ENST00000570659 DEFB115Q30KQ5 88 aa10.03□□□□□ -0.8
SMG6-205ENST00000570659 CST9Q5W186 159 aa10.03□□□□□ -0.8
SMG6-205ENST00000570659 CNTROBQ8N137 903 aa10.03□□□□□ -0.8
SMG6-205ENST00000570659 SLC52A2Q9HAB3 445 aa10.03□□□□□ -0.8
SMG6-205ENST00000570659 PCDH10Q9P2E7 1040 aa10.03□□□□□ -0.8
SMG6-205ENST00000570659 TBC1D2BQ9UPU7 963 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms