RNA–Protein interactions for RNA: ENST00000570177.6

TCF4-245, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,872 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-245ENST00000570177 ERVV-2B6SEH9 535 aa12.39□□□□□ -0.43
TCF4-245ENST00000570177 CERKQ8TCT0 537 aa12.39□□□□□ -0.43
TCF4-245ENST00000570177 NRAPQ86VF7 1730 aa12.39□□□□□ -0.43
TCF4-245ENST00000570177 SLIT2O94813 1529 aa12.39□□□□□ -0.43
TCF4-245ENST00000570177 RRP9O43818 475 aaKnown RBP12.38□□□□□ -0.43
TCF4-245ENST00000570177 LRP10Q7Z4F1 713 aa12.38□□□□□ -0.43
TCF4-245ENST00000570177 DDX54Q8TDD1 881 aaKnown RBP12.38□□□□□ -0.43
TCF4-245ENST00000570177 MEIS3Q99687 375 aa12.38□□□□□ -0.43
TCF4-245ENST00000570177 PDZRN3Q9UPQ7 1066 aa12.38□□□□□ -0.43
TCF4-245ENST00000570177 PLCH1Q4KWH8 1693 aa12.38□□□□□ -0.43
TCF4-245ENST00000570177 CABP4P57796 275 aa12.38□□□□□ -0.43
TCF4-245ENST00000570177 ATP10DQ9P241 1426 aa12.38□□□□□ -0.43
TCF4-245ENST00000570177 C5P01031 1676 aa12.37□□□□□ -0.43
TCF4-245ENST00000570177 NUTM2BA6NNL0 878 aaPredicted RBP12.37□□□□□ -0.43
TCF4-245ENST00000570177 NUTM2EB1AL46 878 aaPredicted RBP12.37□□□□□ -0.43
TCF4-245ENST00000570177 FKBP5Q13451 457 aaPredicted RBP12.37□□□□□ -0.43
TCF4-245ENST00000570177 NUTM2AQ8IVF1 878 aaPredicted RBP12.37□□□□□ -0.43
TCF4-245ENST00000570177 TOGARAM1Q9Y4F4 1720 aa12.37□□□□□ -0.43
TCF4-245ENST00000570177 SPATA31A1Q5TZJ5 1347 aa12.37□□□□□ -0.43
TCF4-245ENST00000570177 ADCY9O60503 1353 aa12.37□□□□□ -0.43
TCF4-245ENST00000570177 CCT4P50991 539 aaKnown RBP12.36□□□□□ -0.43
TCF4-245ENST00000570177 CHMP4BQ9H444 224 aaKnown RBP12.36□□□□□ -0.43
TCF4-245ENST00000570177 DBF4Q9UBU7 674 aaPredicted RBP12.36□□□□□ -0.43
TCF4-245ENST00000570177 USP16Q9Y5T5 823 aa12.36□□□□□ -0.43
TCF4-245ENST00000570177 TNS2Q63HR2 1409 aa12.36□□□□□ -0.43
TCF4-245ENST00000570177 RTL5Q5HYW3 569 aaPredicted RBP12.36□□□□□ -0.43
TCF4-245ENST00000570177 SLC4A10Q6U841 1118 aa12.36□□□□□ -0.43
TCF4-245ENST00000570177 PDE4AP27815 886 aa12.35□□□□□ -0.43
TCF4-245ENST00000570177 DDX21Q9NR30 783 aaKnown RBP eCLIP12.35□□□□□ -0.43
TCF4-245ENST00000570177 KCPQ6ZWJ8 1503 aa12.35□□□□□ -0.43
TCF4-245ENST00000570177 SPATA31A5Q5VU36 1347 aa12.35□□□□□ -0.43
TCF4-245ENST00000570177 SPATA31A7Q8IWB4 1347 aa12.35□□□□□ -0.43
TCF4-245ENST00000570177 PAPPAQ13219 1627 aa12.35□□□□□ -0.43
TCF4-245ENST00000570177 PXDNLA1KZ92 1463 aa12.34□□□□□ -0.43
TCF4-245ENST00000570177 PI4KAP2A4QPH2 592 aa12.34□□□□□ -0.43
TCF4-245ENST00000570177 SNRPA1P09661 255 aaKnown RBP12.34□□□□□ -0.43
TCF4-245ENST00000570177 RGS3P49796 1198 aa12.34□□□□□ -0.43
TCF4-245ENST00000570177 BEND3Q5T5X7 828 aa12.34□□□□□ -0.43
TCF4-245ENST00000570177 CEP85Q6P2H3 762 aa12.34□□□□□ -0.43
TCF4-245ENST00000570177 ANKRD44Q8N8A2 993 aa12.34□□□□□ -0.43
TCF4-245ENST00000570177 PI4KAP1Q8N8J0 262 aa12.34□□□□□ -0.43
TCF4-245ENST00000570177 CHMP4AQ9BY43 222 aa12.34□□□□□ -0.43
TCF4-245ENST00000570177 BACH2Q9BYV9 841 aa12.34□□□□□ -0.43
TCF4-245ENST00000570177 USP44Q9H0E7 712 aa12.34□□□□□ -0.43
TCF4-245ENST00000570177 JCADQ9P266 1359 aa12.34□□□□□ -0.43
TCF4-245ENST00000570177 N4BP2Q86UW6 1770 aaPredicted RBP12.34□□□□□ -0.43
TCF4-245ENST00000570177 FMNL2Q96PY5 1086 aa12.34□□□□□ -0.43
TCF4-245ENST00000570177 NOP58Q9Y2X3 529 aaKnown RBP12.34□□□□□ -0.43
TCF4-245ENST00000570177 UBR2Q8IWV8 1755 aa12.33□□□□□ -0.44
TCF4-245ENST00000570177 BCL9LQ86UU0 1499 aa12.33□□□□□ -0.44
TCF4-245ENST00000570177 NWD2Q9ULI1 1742 aa12.33□□□□□ -0.44
TCF4-245ENST00000570177 NUCB1Q02818 461 aa12.33□□□□□ -0.44
TCF4-245ENST00000570177 MAPK8IP2Q13387 824 aaPredicted RBP12.33□□□□□ -0.44
TCF4-245ENST00000570177 PIGBQ92521 554 aa12.33□□□□□ -0.44
TCF4-245ENST00000570177 THRAP3Q9Y2W1 955 aaKnown RBP12.33□□□□□ -0.44
TCF4-245ENST00000570177 WNK3Q9BYP7 1800 aa12.33□□□□□ -0.44
TCF4-245ENST00000570177 LRP6O75581 1613 aa12.32□□□□□ -0.44
TCF4-245ENST00000570177 DNAAF4Q8WXU2 420 aa12.32□□□□□ -0.44
TCF4-245ENST00000570177 HYPKQ9NX55 129 aa12.32□□□□□ -0.44
TCF4-245ENST00000570177 C8orf34Q49A92 452 aa12.31□□□□□ -0.44
TCF4-245ENST00000570177 KSR2Q6VAB6 950 aa12.31□□□□□ -0.44
TCF4-245ENST00000570177 BARGINQ6ZT62 677 aa12.31□□□□□ -0.44
TCF4-245ENST00000570177 RPAP2Q8IXW5 612 aaPredicted RBP12.31□□□□□ -0.44
TCF4-245ENST00000570177 TTC5Q8N0Z6 440 aa12.31□□□□□ -0.44
TCF4-245ENST00000570177 DCTPP1Q9H773 170 aa12.31□□□□□ -0.44
TCF4-245ENST00000570177 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
TCF4-245ENST00000570177 EXOC5O00471 708 aa12.31□□□□□ -0.44
TCF4-245ENST00000570177 NBPF14Q5TI25 921 aa12.31□□□□□ -0.44
TCF4-245ENST00000570177 NBPF10Q6P3W6 841 aaKnown RBP12.31□□□□□ -0.44
TCF4-245ENST00000570177 UNC5CLQ8IV45 518 aa12.31□□□□□ -0.44
TCF4-245ENST00000570177 FNBP4Q8N3X1 1017 aaPredicted RBP12.31□□□□□ -0.44
TCF4-245ENST00000570177 NBPF15Q8N660 670 aa12.31□□□□□ -0.44
TCF4-245ENST00000570177 ATG3Q9NT62 314 aa12.31□□□□□ -0.44
TCF4-245ENST00000570177 ASAP1Q9ULH1 1129 aa12.31□□□□□ -0.44
TCF4-245ENST00000570177 PIP4K2AP48426 406 aaPredicted RBP12.3□□□□□ -0.44
TCF4-245ENST00000570177 FAM43AQ8N2R8 423 aa12.3□□□□□ -0.44
TCF4-245ENST00000570177 BCL9O00512 1426 aa12.3□□□□□ -0.44
TCF4-245ENST00000570177 MARCH10Q8NA82 808 aaPredicted RBP12.29□□□□□ -0.44
TCF4-245ENST00000570177 GCC1Q96CN9 775 aa12.29□□□□□ -0.44
TCF4-245ENST00000570177 CDCA7Q9BWT1 371 aaPredicted RBP12.29□□□□□ -0.44
TCF4-245ENST00000570177 SRCIN1Q9C0H9 1055 aa12.29□□□□□ -0.44
TCF4-245ENST00000570177 FBXO3Q9UK99 471 aa12.29□□□□□ -0.44
TCF4-245ENST00000570177 MAP3K2Q9Y2U5 619 aa12.29□□□□□ -0.44
TCF4-245ENST00000570177 GNAI2P04899 355 aa12.29□□□□□ -0.44
TCF4-245ENST00000570177 GNAI3P08754 354 aa12.29□□□□□ -0.44
TCF4-245ENST00000570177 HSPA1LP34931 641 aa12.29□□□□□ -0.44
TCF4-245ENST00000570177 COPS6Q7L5N1 327 aa12.29□□□□□ -0.44
TCF4-245ENST00000570177 XAGE3Q8WTP9 111 aa12.29□□□□□ -0.44
TCF4-245ENST00000570177 SLC4A9Q96Q91 983 aa12.29□□□□□ -0.44
TCF4-245ENST00000570177 TMOD3Q9NYL9 352 aa12.29□□□□□ -0.44
TCF4-245ENST00000570177 SPATA31A6Q5VVP1 1343 aa12.28□□□□□ -0.44
TCF4-245ENST00000570177 PTCD1O75127 700 aaKnown RBP12.28□□□□□ -0.44
TCF4-245ENST00000570177 NPM3O75607 178 aaKnown RBP12.28□□□□□ -0.44
TCF4-245ENST00000570177 IGKV5-2P06315 115 aa12.28□□□□□ -0.44
TCF4-245ENST00000570177 VPS72Q15906 364 aa12.28□□□□□ -0.44
TCF4-245ENST00000570177 CHD1LQ86WJ1 897 aa12.28□□□□□ -0.44
TCF4-245ENST00000570177 ITGB4P16144 1822 aa12.28□□□□□ -0.44
TCF4-245ENST00000570177 PNMA6EA0A0J9YXQ4 647 aa12.27□□□□□ -0.44
TCF4-245ENST00000570177 NBPF7P0C2Y1 421 aaPredicted RBP12.27□□□□□ -0.44
TCF4-245ENST00000570177 MYL6BP14649 208 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms