RNA–Protein interactions for RNA: ENST00000570111.5

GGA2-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-217ENST00000570111 SLC39A6Q13433 755 aa10.53□□□□□ -0.72
GGA2-217ENST00000570111 HDAC1Q13547 482 aaPredicted RBP10.53□□□□□ -0.72
GGA2-217ENST00000570111 MEX3CQ5U5Q3 659 aaKnown RBP10.53□□□□□ -0.72
GGA2-217ENST00000570111 NECTIN2Q92692 538 aa10.53□□□□□ -0.72
GGA2-217ENST00000570111 ZNF496Q96IT1 587 aaPredicted RBP10.53□□□□□ -0.72
GGA2-217ENST00000570111 DDX21Q9NR30 783 aaKnown RBP eCLIP10.53□□□□□ -0.72
GGA2-217ENST00000570111 ITGB4P16144 1822 aa10.52□□□□□ -0.73
GGA2-217ENST00000570111 G2E3Q7L622 706 aa10.52□□□□□ -0.73
GGA2-217ENST00000570111 VSIG10Q8N0Z9 540 aa10.52□□□□□ -0.73
GGA2-217ENST00000570111 USP21Q9UK80 565 aa10.52□□□□□ -0.73
GGA2-217ENST00000570111 PCDHB15Q9Y5E8 787 aa10.52□□□□□ -0.73
GGA2-217ENST00000570111 KCPQ6ZWJ8 1503 aa10.52□□□□□ -0.73
GGA2-217ENST00000570111 GLI3P10071 1580 aa10.52□□□□□ -0.73
GGA2-217ENST00000570111 BCL9O00512 1426 aa10.51□□□□□ -0.73
GGA2-217ENST00000570111 ATP10DQ9P241 1426 aa10.51□□□□□ -0.73
GGA2-217ENST00000570111 DOT1LQ8TEK3 1739 aa10.51□□□□□ -0.73
GGA2-217ENST00000570111 SLC4A10Q6U841 1118 aa10.51□□□□□ -0.73
GGA2-217ENST00000570111 TEX13AQ9BXU3 409 aaPredicted RBP10.51□□□□□ -0.73
GGA2-217ENST00000570111 IGHDP01880 384 aa10.5□□□□□ -0.73
GGA2-217ENST00000570111 GNAI3P08754 354 aa10.5□□□□□ -0.73
GGA2-217ENST00000570111 DNAAF4Q8WXU2 420 aa10.5□□□□□ -0.73
GGA2-217ENST00000570111 PHAXQ9H814 394 aaKnown RBP10.5□□□□□ -0.73
GGA2-217ENST00000570111 HDAC5Q9UQL6 1122 aa10.5□□□□□ -0.73
GGA2-217ENST00000570111 IBTKQ9P2D0 1353 aaPredicted RBP10.5□□□□□ -0.73
GGA2-217ENST00000570111 KSR2Q6VAB6 950 aa10.49□□□□□ -0.73
GGA2-217ENST00000570111 RPAP2Q8IXW5 612 aaPredicted RBP10.49□□□□□ -0.73
GGA2-217ENST00000570111 PIGBQ92521 554 aa10.49□□□□□ -0.73
GGA2-217ENST00000570111 SRCIN1Q9C0H9 1055 aa10.49□□□□□ -0.73
GGA2-217ENST00000570111 RNF216Q9NWF9 866 aaPredicted RBP10.49□□□□□ -0.73
GGA2-217ENST00000570111 THSD7AQ9UPZ6 1657 aa10.48□□□□□ -0.73
GGA2-217ENST00000570111 PRAMEF22A3QJZ6 481 aa10.48□□□□□ -0.73
GGA2-217ENST00000570111 PI4KAP2A4QPH2 592 aa10.48□□□□□ -0.73
GGA2-217ENST00000570111 F6X3S4 739 aa10.48□□□□□ -0.73
GGA2-217ENST00000570111 PDIA6Q15084 440 aa10.48□□□□□ -0.73
GGA2-217ENST00000570111 PI4KAP1Q8N8J0 262 aa10.48□□□□□ -0.73
GGA2-217ENST00000570111 GCC1Q96CN9 775 aa10.48□□□□□ -0.73
GGA2-217ENST00000570111 USP16Q9Y5T5 823 aa10.48□□□□□ -0.73
GGA2-217ENST00000570111 HMMRO75330 724 aa10.47□□□□□ -0.73
GGA2-217ENST00000570111 ALDH1L1O75891 902 aa10.47□□□□□ -0.73
GGA2-217ENST00000570111 GNAI2P04899 355 aa10.47□□□□□ -0.73
GGA2-217ENST00000570111 FAM98CQ17RN3 349 aaKnown RBP10.47□□□□□ -0.73
GGA2-217ENST00000570111 SMC5Q8IY18 1101 aa10.47□□□□□ -0.73
GGA2-217ENST00000570111 TRPC5Q9UL62 973 aaPredicted RBP10.47□□□□□ -0.73
GGA2-217ENST00000570111 AFF2P51816 1311 aa10.47□□□□□ -0.73
GGA2-217ENST00000570111 ADCY9O60503 1353 aa10.47□□□□□ -0.73
GGA2-217ENST00000570111 CICQ96RK0 1608 aaPredicted RBP10.47□□□□□ -0.73
GGA2-217ENST00000570111 PTCD1O75127 700 aaKnown RBP10.46□□□□□ -0.73
GGA2-217ENST00000570111 STARD3NLO95772 234 aa10.46□□□□□ -0.73
GGA2-217ENST00000570111 NEXNQ0ZGT2 675 aa10.46□□□□□ -0.73
GGA2-217ENST00000570111 PROSER3Q2NL68 480 aa10.46□□□□□ -0.73
GGA2-217ENST00000570111 BEND3Q5T5X7 828 aa10.46□□□□□ -0.73
GGA2-217ENST00000570111 RIC3Q7Z5B4 369 aa10.46□□□□□ -0.73
GGA2-217ENST00000570111 ANKRD44Q8N8A2 993 aa10.46□□□□□ -0.73
GGA2-217ENST00000570111 MARCH10Q8NA82 808 aaPredicted RBP10.46□□□□□ -0.73
GGA2-217ENST00000570111 LINS1Q8NG48 757 aa10.46□□□□□ -0.73
GGA2-217ENST00000570111 SYTL4Q96C24 671 aaPredicted RBP10.46□□□□□ -0.73
GGA2-217ENST00000570111 MEIS3Q99687 375 aa10.46□□□□□ -0.73
GGA2-217ENST00000570111 ATG3Q9NT62 314 aa10.46□□□□□ -0.73
GGA2-217ENST00000570111 MAP3K2Q9Y2U5 619 aa10.46□□□□□ -0.73
GGA2-217ENST00000570111 ATRNO75882 1429 aa10.46□□□□□ -0.74
GGA2-217ENST00000570111 ANXA1P04083 346 aa10.45□□□□□ -0.74
GGA2-217ENST00000570111 UBTFL1P0CB47 393 aaPredicted RBP10.45□□□□□ -0.74
GGA2-217ENST00000570111 MYL6BP14649 208 aa10.45□□□□□ -0.74
GGA2-217ENST00000570111 PRIM1P49642 420 aaKnown RBP10.45□□□□□ -0.74
GGA2-217ENST00000570111 XAGE3Q8WTP9 111 aa10.45□□□□□ -0.74
GGA2-217ENST00000570111 SMARCC1Q92922 1105 aaPredicted RBP10.45□□□□□ -0.74
GGA2-217ENST00000570111 GJD4Q96KN9 370 aaPredicted RBP10.45□□□□□ -0.74
GGA2-217ENST00000570111 ASAP1Q9ULH1 1129 aa10.45□□□□□ -0.74
GGA2-217ENST00000570111 ZNF831Q5JPB2 1677 aa10.44□□□□□ -0.74
GGA2-217ENST00000570111 A0A0G2JS52 829 aa10.44□□□□□ -0.74
GGA2-217ENST00000570111 MYT1Q01538 1121 aa10.44□□□□□ -0.74
GGA2-217ENST00000570111 AIMP1Q12904 312 aaKnown RBP10.44□□□□□ -0.74
GGA2-217ENST00000570111 CEP85Q6P2H3 762 aa10.44□□□□□ -0.74
GGA2-217ENST00000570111 ANKRD13DQ6ZTN6 518 aa10.44□□□□□ -0.74
GGA2-217ENST00000570111 COPS6Q7L5N1 327 aa10.44□□□□□ -0.74
GGA2-217ENST00000570111 LRP10Q7Z4F1 713 aa10.44□□□□□ -0.74
GGA2-217ENST00000570111 PLBD2Q8NHP8 589 aa10.44□□□□□ -0.74
GGA2-217ENST00000570111 RBM42Q9BTD8 480 aaKnown RBP10.44□□□□□ -0.74
GGA2-217ENST00000570111 C1orf115Q9H7X2 142 aa10.44□□□□□ -0.74
GGA2-217ENST00000570111 ARFGEF2Q9Y6D5 1785 aa10.44□□□□□ -0.74
GGA2-217ENST00000570111 ONECUT3O60422 494 aaPredicted RBP10.43□□□□□ -0.74
GGA2-217ENST00000570111 METTL22Q9BUU2 404 aaPredicted RBP10.43□□□□□ -0.74
GGA2-217ENST00000570111 USP44Q9H0E7 712 aa10.43□□□□□ -0.74
GGA2-217ENST00000570111 ZBTB47Q9UFB7 747 aaPredicted RBP10.43□□□□□ -0.74
GGA2-217ENST00000570111 PDZRN3Q9UPQ7 1066 aa10.43□□□□□ -0.74
GGA2-217ENST00000570111 TJP1Q07157 1748 aa10.42□□□□□ -0.74
GGA2-217ENST00000570111 NHSQ6T4R5 1651 aa10.42□□□□□ -0.74
GGA2-217ENST00000570111 NUCB1Q02818 461 aa10.42□□□□□ -0.74
GGA2-217ENST00000570111 TSHZ2Q9NRE2 1034 aa10.42□□□□□ -0.74
GGA2-217ENST00000570111 C9orf78Q9NZ63 289 aaPredicted RBP10.42□□□□□ -0.74
GGA2-217ENST00000570111 NUP188Q5SRE5 1749 aa10.41□□□□□ -0.74
GGA2-217ENST00000570111 PALLDQ8WX93 1383 aa10.41□□□□□ -0.74
GGA2-217ENST00000570111 UTYO14607 1347 aa10.41□□□□□ -0.74
GGA2-217ENST00000570111 NBPF26B4DH59 902 aa10.41□□□□□ -0.74
GGA2-217ENST00000570111 A1BGP04217 495 aa10.41□□□□□ -0.74
GGA2-217ENST00000570111 HOXD11P31277 338 aaPredicted RBP10.41□□□□□ -0.74
GGA2-217ENST00000570111 RGS3P49796 1198 aa10.41□□□□□ -0.74
GGA2-217ENST00000570111 ATP8B2P98198 1209 aa10.41□□□□□ -0.74
GGA2-217ENST00000570111 NBPF14Q5TI25 921 aa10.41□□□□□ -0.74
GGA2-217ENST00000570111 NBPF10Q6P3W6 841 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms