RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 CANXP27824 592 aaKnown RBP30.05■■■□□ 2.4
RBFOX1-219ENST00000569895 TM4SF1P30408 202 aa30.05■■■□□ 2.4
RBFOX1-219ENST00000569895 C1QTNF8P60827 252 aa30.05■■■□□ 2.4
RBFOX1-219ENST00000569895 COL15A1P39059 1388 aa30.04■■■□□ 2.4
RBFOX1-219ENST00000569895 CEMIPQ8WUJ3 1361 aa30.04■■■□□ 2.4
RBFOX1-219ENST00000569895 A0A087WZG4 1122 aa30.04■■■□□ 2.4
RBFOX1-219ENST00000569895 BTBD11A6QL63 1104 aa30.04■■■□□ 2.4
RBFOX1-219ENST00000569895 FMNL2Q96PY5 1086 aa30.04■■■□□ 2.4
RBFOX1-219ENST00000569895 HEG1Q9ULI3 1381 aa30.03■■■□□ 2.4
RBFOX1-219ENST00000569895 NEFMP07197 916 aa30.03■■■□□ 2.4
RBFOX1-219ENST00000569895 DDR1Q08345 913 aa30.03■■■□□ 2.4
RBFOX1-219ENST00000569895 VIRMAQ69YN4 1812 aaKnown RBP30.03■■■□□ 2.4
RBFOX1-219ENST00000569895 KIF13BQ9NQT8 1826 aa30.02■■■□□ 2.4
RBFOX1-219ENST00000569895 POLRMTO00411 1230 aaKnown RBP30.01■■■□□ 2.39
RBFOX1-219ENST00000569895 ATP10DQ9P241 1426 aa30■■■□□ 2.39
RBFOX1-219ENST00000569895 NPM2Q86SE8 214 aaKnown RBP30■■■□□ 2.39
RBFOX1-219ENST00000569895 PIM2Q9P1W9 311 aa30■■■□□ 2.39
RBFOX1-219ENST00000569895 HTATSF1O43719 755 aaKnown RBP29.99■■■□□ 2.39
RBFOX1-219ENST00000569895 GPBP1L1Q9HC44 474 aaPredicted RBP29.99■■■□□ 2.39
RBFOX1-219ENST00000569895 EIF5P55010 431 aaKnown RBP29.98■■■□□ 2.39
RBFOX1-219ENST00000569895 NFIXQ14938 502 aa29.98■■■□□ 2.39
RBFOX1-219ENST00000569895 ARHGAP27Q6ZUM4 889 aa29.97■■■□□ 2.39
RBFOX1-219ENST00000569895 UBR2Q8IWV8 1755 aa29.97■■■□□ 2.39
RBFOX1-219ENST00000569895 KCNA3P22001 575 aa29.96■■■□□ 2.39
RBFOX1-219ENST00000569895 IL6STP40189 918 aaPredicted RBP29.95■■■□□ 2.39
RBFOX1-219ENST00000569895 DALRD3Q5D0E6 543 aaKnown RBP29.95■■■□□ 2.39
RBFOX1-219ENST00000569895 MCM10Q7L590 875 aa29.95■■■□□ 2.39
RBFOX1-219ENST00000569895 ADCY9O60503 1353 aa29.94■■■□□ 2.38
RBFOX1-219ENST00000569895 BCL2L12Q9HB09 334 aa29.94■■■□□ 2.38
RBFOX1-219ENST00000569895 ZNF330Q9Y3S2 320 aaPredicted RBP29.94■■■□□ 2.38
RBFOX1-219ENST00000569895 N4BP2Q86UW6 1770 aaPredicted RBP29.94■■■□□ 2.38
RBFOX1-219ENST00000569895 SERPINB2P05120 415 aa29.93■■■□□ 2.38
RBFOX1-219ENST00000569895 PNNQ9H307 717 aaKnown RBP29.93■■■□□ 2.38
RBFOX1-219ENST00000569895 KCNQ3O43525 872 aa29.92■■■□□ 2.38
RBFOX1-219ENST00000569895 KIAA1551Q9HCM1 1747 aa29.91■■■□□ 2.38
RBFOX1-219ENST00000569895 ZNF526Q8TF50 670 aaPredicted RBP29.91■■■□□ 2.38
RBFOX1-219ENST00000569895 SENP3-EIF4A1A0A087X0R7 540 aa29.9■■■□□ 2.38
RBFOX1-219ENST00000569895 A1BGP04217 495 aa29.9■■■□□ 2.38
RBFOX1-219ENST00000569895 SNRPA1P09661 255 aaKnown RBP29.9■■■□□ 2.38
RBFOX1-219ENST00000569895 CHRNA5P30532 468 aa29.9■■■□□ 2.38
RBFOX1-219ENST00000569895 SIPA1L3O60292 1781 aaPredicted RBP29.9■■■□□ 2.38
RBFOX1-219ENST00000569895 DCTN1Q14203 1278 aa29.89■■■□□ 2.38
RBFOX1-219ENST00000569895 TAF7Q15545 349 aaPredicted RBP29.89■■■□□ 2.38
RBFOX1-219ENST00000569895 BICDL1Q6ZP65 573 aa29.89■■■□□ 2.38
RBFOX1-219ENST00000569895 TBC1D2BQ9UPU7 963 aa29.89■■■□□ 2.38
RBFOX1-219ENST00000569895 RALBP1Q15311 655 aa29.88■■■□□ 2.37
RBFOX1-219ENST00000569895 USP16Q9Y5T5 823 aa29.87■■■□□ 2.37
RBFOX1-219ENST00000569895 TBC1D9BQ66K14 1250 aa29.84■■■□□ 2.37
RBFOX1-219ENST00000569895 PNISRQ8TF01 805 aaKnown RBP29.84■■■□□ 2.37
RBFOX1-219ENST00000569895 PLEKHF1Q96S99 279 aa29.83■■■□□ 2.37
RBFOX1-219ENST00000569895 MAPK8IP3Q9UPT6 1336 aa29.82■■■□□ 2.36
RBFOX1-219ENST00000569895 H0YIN7 160 aa29.82■■■□□ 2.36
RBFOX1-219ENST00000569895 DZIP3Q86Y13 1208 aaKnown RBP29.82■■■□□ 2.36
RBFOX1-219ENST00000569895 SETDB2Q96T68 719 aa29.82■■■□□ 2.36
RBFOX1-219ENST00000569895 PDZRN3Q9UPQ7 1066 aa29.82■■■□□ 2.36
RBFOX1-219ENST00000569895 NFE2L2Q16236 605 aa29.81■■■□□ 2.36
RBFOX1-219ENST00000569895 C2CD5Q86YS7 1000 aa29.81■■■□□ 2.36
RBFOX1-219ENST00000569895 CAMTA2O94983 1202 aa29.8■■■□□ 2.36
RBFOX1-219ENST00000569895 C9orf131Q5VYM1 1079 aa29.8■■■□□ 2.36
RBFOX1-219ENST00000569895 CARMIL3Q8ND23 1372 aa29.79■■■□□ 2.36
RBFOX1-219ENST00000569895 BRCA1P38398 1863 aaKnown RBP29.79■■■□□ 2.36
RBFOX1-219ENST00000569895 PRAMEF22A3QJZ6 481 aa29.79■■■□□ 2.36
RBFOX1-219ENST00000569895 NPHP1O15259 732 aa29.79■■■□□ 2.36
RBFOX1-219ENST00000569895 TTLL6Q8N841 843 aa29.79■■■□□ 2.36
RBFOX1-219ENST00000569895 PDE6BP35913 854 aa29.78■■■□□ 2.36
RBFOX1-219ENST00000569895 DDX10Q13206 875 aaKnown RBP29.78■■■□□ 2.36
RBFOX1-219ENST00000569895 CLEC4GQ6UXB4 293 aa29.78■■■□□ 2.36
RBFOX1-219ENST00000569895 BRIP1Q9BX63 1249 aa29.78■■■□□ 2.36
RBFOX1-219ENST00000569895 MIS18AQ9NYP9 233 aa29.77■■■□□ 2.36
RBFOX1-219ENST00000569895 ZNF652Q9Y2D9 606 aa29.77■■■□□ 2.36
RBFOX1-219ENST00000569895 NRXN2Q9P2S2 1712 aa29.76■■■□□ 2.36
RBFOX1-219ENST00000569895 ARFGEF1Q9Y6D6 1849 aa29.75■■■□□ 2.35
RBFOX1-219ENST00000569895 PIP4K2AP48426 406 aaPredicted RBP29.75■■■□□ 2.35
RBFOX1-219ENST00000569895 AFDNP55196 1824 aaKnown RBP29.75■■■□□ 2.35
RBFOX1-219ENST00000569895 PRR5LQ6MZQ0 368 aa29.74■■■□□ 2.35
RBFOX1-219ENST00000569895 CNBD1Q8NA66 436 aa29.74■■■□□ 2.35
RBFOX1-219ENST00000569895 ST5P78524 1137 aa29.73■■■□□ 2.35
RBFOX1-219ENST00000569895 RNF181Q9P0P0 153 aa29.73■■■□□ 2.35
RBFOX1-219ENST00000569895 KIF3CO14782 793 aa29.72■■■□□ 2.35
RBFOX1-219ENST00000569895 RGL2O15211 777 aa29.72■■■□□ 2.35
RBFOX1-219ENST00000569895 ZNF622Q969S3 477 aaKnown RBP eCLIP29.72■■■□□ 2.35
RBFOX1-219ENST00000569895 SCN7AQ01118 1682 aa29.71■■■□□ 2.35
RBFOX1-219ENST00000569895 NBPF26B4DH59 902 aa29.7■■■□□ 2.35
RBFOX1-219ENST00000569895 NBPF10Q6P3W6 841 aaKnown RBP29.7■■■□□ 2.35
RBFOX1-219ENST00000569895 NBPF15Q8N660 670 aa29.7■■■□□ 2.35
RBFOX1-219ENST00000569895 MYBBP1AQ9BQG0 1328 aaKnown RBP29.7■■■□□ 2.34
RBFOX1-219ENST00000569895 EIF4A1P60842 406 aaKnown RBP29.68■■■□□ 2.34
RBFOX1-219ENST00000569895 NBPF5PQ86XG9 351 aaPredicted RBP29.68■■■□□ 2.34
RBFOX1-219ENST00000569895 CCDC24Q8N4L8 307 aa29.68■■■□□ 2.34
RBFOX1-219ENST00000569895 THUMPD2Q9BTF0 503 aaKnown RBP29.68■■■□□ 2.34
RBFOX1-219ENST00000569895 KDM2BQ8NHM5 1336 aa29.68■■■□□ 2.34
RBFOX1-219ENST00000569895 RIPK4P57078 832 aa29.67■■■□□ 2.34
RBFOX1-219ENST00000569895 LMNB1P20700 586 aa29.66■■■□□ 2.34
RBFOX1-219ENST00000569895 LMOD3Q0VAK6 560 aa29.66■■■□□ 2.34
RBFOX1-219ENST00000569895 TPTE2Q6XPS3 522 aa29.66■■■□□ 2.34
RBFOX1-219ENST00000569895 TOMM70O94826 608 aa29.65■■■□□ 2.34
RBFOX1-219ENST00000569895 CNKSR1Q969H4 720 aa29.65■■■□□ 2.34
RBFOX1-219ENST00000569895 NIP7Q9Y221 180 aaKnown RBP eCLIP29.65■■■□□ 2.34
RBFOX1-219ENST00000569895 HSPA6P17066 643 aa29.64■■■□□ 2.34
RBFOX1-219ENST00000569895 NMRK2Q9NPI5 230 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms