RNA–Protein interactions for RNA: ENST00000569889.1

RBFOX1-218, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-218ENST00000569889 TM4SF1P30408 202 aa16.55■□□□□ 0.24
RBFOX1-218ENST00000569889 GNAT3A8MTJ3 354 aa16.54■□□□□ 0.24
RBFOX1-218ENST00000569889 KIF3CO14782 793 aa16.54■□□□□ 0.24
RBFOX1-218ENST00000569889 NFIXQ14938 502 aa16.54■□□□□ 0.24
RBFOX1-218ENST00000569889 IL17REQ8NFR9 667 aa16.54■□□□□ 0.24
RBFOX1-218ENST00000569889 NARFQ9UHQ1 456 aa16.54■□□□□ 0.24
RBFOX1-218ENST00000569889 COL15A1P39059 1388 aa16.53■□□□□ 0.24
RBFOX1-218ENST00000569889 BRCA1P38398 1863 aaKnown RBP16.53■□□□□ 0.24
RBFOX1-218ENST00000569889 CCDC24Q8N4L8 307 aa16.53■□□□□ 0.24
RBFOX1-218ENST00000569889 GAS2L2Q8NHY3 880 aa16.53■□□□□ 0.24
RBFOX1-218ENST00000569889 CFAP53Q96M91 514 aa16.53■□□□□ 0.24
RBFOX1-218ENST00000569889 NMRK2Q9NPI5 230 aa16.53■□□□□ 0.24
RBFOX1-218ENST00000569889 AFDNP55196 1824 aaKnown RBP16.53■□□□□ 0.24
RBFOX1-218ENST00000569889 KCPQ6ZWJ8 1503 aa16.52■□□□□ 0.24
RBFOX1-218ENST00000569889 STARD3NLO95772 234 aa16.52■□□□□ 0.24
RBFOX1-218ENST00000569889 SERPINB2P05120 415 aa16.52■□□□□ 0.24
RBFOX1-218ENST00000569889 HSPA6P17066 643 aa16.52■□□□□ 0.24
RBFOX1-218ENST00000569889 PRKAR2BP31323 418 aa16.52■□□□□ 0.24
RBFOX1-218ENST00000569889 RNF181Q9P0P0 153 aa16.52■□□□□ 0.24
RBFOX1-218ENST00000569889 TBC1D2BQ9UPU7 963 aa16.52■□□□□ 0.24
RBFOX1-218ENST00000569889 KCNQ3O43525 872 aa16.51■□□□□ 0.23
RBFOX1-218ENST00000569889 ZNF496Q96IT1 587 aaPredicted RBP16.51■□□□□ 0.23
RBFOX1-218ENST00000569889 PHACTR3Q96KR7 559 aa16.51■□□□□ 0.23
RBFOX1-218ENST00000569889 BCL2L12Q9HB09 334 aa16.51■□□□□ 0.23
RBFOX1-218ENST00000569889 ZNF219Q9P2Y4 722 aaPredicted RBP16.51■□□□□ 0.23
RBFOX1-218ENST00000569889 ARFGEF1Q9Y6D6 1849 aa16.51■□□□□ 0.23
RBFOX1-218ENST00000569889 U2AF1L5P0DN76 240 aaPredicted RBP16.5■□□□□ 0.23
RBFOX1-218ENST00000569889 U2AF1Q01081 240 aaKnown RBP eCLIP16.5■□□□□ 0.23
RBFOX1-218ENST00000569889 NPM2Q86SE8 214 aaKnown RBP16.5■□□□□ 0.23
RBFOX1-218ENST00000569889 C2CD5Q86YS7 1000 aa16.5■□□□□ 0.23
RBFOX1-218ENST00000569889 C16orf71Q8IYS4 520 aaPredicted RBP16.5■□□□□ 0.23
RBFOX1-218ENST00000569889 ADAMTS7Q9UKP4 1686 aa16.5■□□□□ 0.23
RBFOX1-218ENST00000569889 MRC1P22897 1456 aa16.49■□□□□ 0.23
RBFOX1-218ENST00000569889 NPHP1O15259 732 aa16.49■□□□□ 0.23
RBFOX1-218ENST00000569889 A1BGP04217 495 aa16.49■□□□□ 0.23
RBFOX1-218ENST00000569889 PIP4K2AP48426 406 aaPredicted RBP16.49■□□□□ 0.23
RBFOX1-218ENST00000569889 RASSF7Q02833 373 aa16.49■□□□□ 0.23
RBFOX1-218ENST00000569889 ZNF790Q6PG37 636 aa16.49■□□□□ 0.23
RBFOX1-218ENST00000569889 VSIG10Q8N0Z9 540 aa16.49■□□□□ 0.23
RBFOX1-218ENST00000569889 NUDCQ9Y266 331 aa16.49■□□□□ 0.23
RBFOX1-218ENST00000569889 COL3A1P02461 1466 aaPredicted RBP16.48■□□□□ 0.23
RBFOX1-218ENST00000569889 CCDC88AQ3V6T2 1871 aa16.48■□□□□ 0.23
RBFOX1-218ENST00000569889 A0A087WZG4 1122 aa16.48■□□□□ 0.23
RBFOX1-218ENST00000569889 BTBD11A6QL63 1104 aa16.48■□□□□ 0.23
RBFOX1-218ENST00000569889 ZNF622Q969S3 477 aaKnown RBP eCLIP16.48■□□□□ 0.23
RBFOX1-218ENST00000569889 RRAGCQ9HB90 399 aa16.48■□□□□ 0.23
RBFOX1-218ENST00000569889 TBC1D9BQ66K14 1250 aa16.47■□□□□ 0.23
RBFOX1-218ENST00000569889 FMNL2Q96PY5 1086 aa16.47■□□□□ 0.23
RBFOX1-218ENST00000569889 SBF1O95248 1867 aa16.47■□□□□ 0.23
RBFOX1-218ENST00000569889 H0YIN7 160 aa16.46■□□□□ 0.23
RBFOX1-218ENST00000569889 PPP2R1AP30153 589 aa16.46■□□□□ 0.23
RBFOX1-218ENST00000569889 EIF5P55010 431 aaKnown RBP16.46■□□□□ 0.23
RBFOX1-218ENST00000569889 DCTN1Q14203 1278 aa16.46■□□□□ 0.23
RBFOX1-218ENST00000569889 MCM10Q7L590 875 aa16.46■□□□□ 0.23
RBFOX1-218ENST00000569889 RTF1Q92541 710 aaKnown RBP16.46■□□□□ 0.23
RBFOX1-218ENST00000569889 HEG1Q9ULI3 1381 aa16.46■□□□□ 0.23
RBFOX1-218ENST00000569889 UBR2Q8IWV8 1755 aa16.46■□□□□ 0.22
RBFOX1-218ENST00000569889 TOMM70O94826 608 aa16.45■□□□□ 0.22
RBFOX1-218ENST00000569889 TTLL6Q8N841 843 aa16.45■□□□□ 0.22
RBFOX1-218ENST00000569889 TEX13AQ9BXU3 409 aaPredicted RBP16.45■□□□□ 0.22
RBFOX1-218ENST00000569889 RSPH6AQ9H0K4 717 aa16.45■□□□□ 0.22
RBFOX1-218ENST00000569889 NPC1L1Q9UHC9 1359 aa16.45■□□□□ 0.22
RBFOX1-218ENST00000569889 CARMIL3Q8ND23 1372 aa16.44■□□□□ 0.22
RBFOX1-218ENST00000569889 PRAMEF22A3QJZ6 481 aa16.44■□□□□ 0.22
RBFOX1-218ENST00000569889 USP16Q9Y5T5 823 aa16.43■□□□□ 0.22
RBFOX1-218ENST00000569889 SIPA1L3O60292 1781 aaPredicted RBP16.43■□□□□ 0.22
RBFOX1-218ENST00000569889 KDM2BQ8NHM5 1336 aa16.43■□□□□ 0.22
RBFOX1-218ENST00000569889 FAM177BA6PVY3 158 aa16.42■□□□□ 0.22
RBFOX1-218ENST00000569889 HTRA3P83110 453 aa16.42■□□□□ 0.22
RBFOX1-218ENST00000569889 SETDB2Q96T68 719 aa16.42■□□□□ 0.22
RBFOX1-218ENST00000569889 MIS18AQ9NYP9 233 aa16.42■□□□□ 0.22
RBFOX1-218ENST00000569889 CACNA1SQ13698 1873 aa16.42■□□□□ 0.22
RBFOX1-218ENST00000569889 IL6STP40189 918 aaPredicted RBP16.41■□□□□ 0.22
RBFOX1-218ENST00000569889 APLP1P51693 650 aa16.41■□□□□ 0.22
RBFOX1-218ENST00000569889 DZIP3Q86Y13 1208 aaKnown RBP16.41■□□□□ 0.22
RBFOX1-218ENST00000569889 C21orf2O43822 256 aa16.4■□□□□ 0.22
RBFOX1-218ENST00000569889 PRR5LQ6MZQ0 368 aa16.4■□□□□ 0.22
RBFOX1-218ENST00000569889 NGEFQ8N5V2 710 aa16.4■□□□□ 0.22
RBFOX1-218ENST00000569889 NRXN2Q9P2S2 1712 aa16.39■□□□□ 0.21
RBFOX1-218ENST00000569889 LMNB1P20700 586 aa16.39■□□□□ 0.21
RBFOX1-218ENST00000569889 PDE6BP35913 854 aa16.39■□□□□ 0.21
RBFOX1-218ENST00000569889 PRELPP51888 382 aa16.39■□□□□ 0.21
RBFOX1-218ENST00000569889 ANKRD31Q8N7Z5 1873 aa16.39■□□□□ 0.21
RBFOX1-218ENST00000569889 CAMTA2O94983 1202 aa16.38■□□□□ 0.21
RBFOX1-218ENST00000569889 NEFMP07197 916 aa16.38■□□□□ 0.21
RBFOX1-218ENST00000569889 CNBD1Q8NA66 436 aa16.38■□□□□ 0.21
RBFOX1-218ENST00000569889 RBM46Q8TBY0 533 aaKnown RBP16.38■□□□□ 0.21
RBFOX1-218ENST00000569889 DLEC1Q9Y238 1755 aa16.38■□□□□ 0.21
RBFOX1-218ENST00000569889 SNRPA1P09661 255 aaKnown RBP16.37■□□□□ 0.21
RBFOX1-218ENST00000569889 ST5P78524 1137 aa16.37■□□□□ 0.21
RBFOX1-218ENST00000569889 BRIP1Q9BX63 1249 aa16.37■□□□□ 0.21
RBFOX1-218ENST00000569889 CEMIPQ8WUJ3 1361 aa16.37■□□□□ 0.21
RBFOX1-218ENST00000569889 SCN7AQ01118 1682 aa16.35■□□□□ 0.21
RBFOX1-218ENST00000569889 NFKBIEO00221 500 aa16.35■□□□□ 0.21
RBFOX1-218ENST00000569889 NBPF5PQ86XG9 351 aaPredicted RBP16.35■□□□□ 0.21
RBFOX1-218ENST00000569889 SLX4Q8IY92 1834 aa16.34■□□□□ 0.21
RBFOX1-218ENST00000569889 TAF7Q15545 349 aaPredicted RBP16.34■□□□□ 0.21
RBFOX1-218ENST00000569889 THUMPD2Q9BTF0 503 aaKnown RBP16.34■□□□□ 0.21
RBFOX1-218ENST00000569889 DLG5Q8TDM6 1919 aa16.34■□□□□ 0.21
RBFOX1-218ENST00000569889 COL11A2P13942 1736 aaPredicted RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms