RNA–Protein interactions for RNA: ENST00000569783.1

CDH11-218, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 539 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-218ENST00000569783 COL15A1P39059 1388 aa26.06■■□□□ 1.76
CDH11-218ENST00000569783 KCPQ6ZWJ8 1503 aa26.05■■□□□ 1.76
CDH11-218ENST00000569783 STARD3NLO95772 234 aa26.04■■□□□ 1.76
CDH11-218ENST00000569783 GNAT3A8MTJ3 354 aa26.03■■□□□ 1.76
CDH11-218ENST00000569783 CANXP27824 592 aaKnown RBP26.03■■□□□ 1.76
CDH11-218ENST00000569783 CHRNA5P30532 468 aa26.03■■□□□ 1.76
CDH11-218ENST00000569783 C9orf131Q5VYM1 1079 aa26.02■■□□□ 1.76
CDH11-218ENST00000569783 CFAP53Q96M91 514 aa26.02■■□□□ 1.76
CDH11-218ENST00000569783 ADAMTS7Q9UKP4 1686 aa26.02■■□□□ 1.76
CDH11-218ENST00000569783 COL3A1P02461 1466 aaPredicted RBP26.01■■□□□ 1.75
CDH11-218ENST00000569783 NFIXQ14938 502 aa26.01■■□□□ 1.75
CDH11-218ENST00000569783 BRCA1P38398 1863 aaKnown RBP26■■□□□ 1.75
CDH11-218ENST00000569783 TEX13AQ9BXU3 409 aaPredicted RBP26■■□□□ 1.75
CDH11-218ENST00000569783 VIRMAQ69YN4 1812 aaKnown RBP26■■□□□ 1.75
CDH11-218ENST00000569783 A0A087WZG4 1122 aa25.99■■□□□ 1.75
CDH11-218ENST00000569783 ZNF790Q6PG37 636 aa25.99■■□□□ 1.75
CDH11-218ENST00000569783 IL17REQ8NFR9 667 aa25.99■■□□□ 1.75
CDH11-218ENST00000569783 TOMM70O94826 608 aa25.98■■□□□ 1.75
CDH11-218ENST00000569783 SERPINB2P05120 415 aa25.98■■□□□ 1.75
CDH11-218ENST00000569783 ARFGEF1Q9Y6D6 1849 aa25.98■■□□□ 1.75
CDH11-218ENST00000569783 NPM2Q86SE8 214 aaKnown RBP25.97■■□□□ 1.75
CDH11-218ENST00000569783 ZNF496Q96IT1 587 aaPredicted RBP25.97■■□□□ 1.75
CDH11-218ENST00000569783 RNF181Q9P0P0 153 aa25.97■■□□□ 1.75
CDH11-218ENST00000569783 NUDCQ9Y266 331 aa25.97■■□□□ 1.75
CDH11-218ENST00000569783 BCL2L12Q9HB09 334 aa25.96■■□□□ 1.75
CDH11-218ENST00000569783 HEG1Q9ULI3 1381 aa25.95■■□□□ 1.75
CDH11-218ENST00000569783 EIF5P55010 431 aaKnown RBP25.95■■□□□ 1.74
CDH11-218ENST00000569783 C16orf71Q8IYS4 520 aaPredicted RBP25.95■■□□□ 1.74
CDH11-218ENST00000569783 FMNL2Q96PY5 1086 aa25.95■■□□□ 1.74
CDH11-218ENST00000569783 NMRK2Q9NPI5 230 aa25.95■■□□□ 1.74
CDH11-218ENST00000569783 ZNF330Q9Y3S2 320 aaPredicted RBP25.95■■□□□ 1.74
CDH11-218ENST00000569783 CEP350Q5VT06 3117 aa25.95■■□□□ 1.74
CDH11-218ENST00000569783 PRKAR2BP31323 418 aa25.94■■□□□ 1.74
CDH11-218ENST00000569783 BICDL1Q6ZP65 573 aa25.94■■□□□ 1.74
CDH11-218ENST00000569783 UBR2Q8IWV8 1755 aa25.94■■□□□ 1.74
CDH11-218ENST00000569783 KDM2BQ8NHM5 1336 aa25.93■■□□□ 1.74
CDH11-218ENST00000569783 BTBD11A6QL63 1104 aa25.91■■□□□ 1.74
CDH11-218ENST00000569783 H0YIN7 160 aa25.91■■□□□ 1.74
CDH11-218ENST00000569783 APLP1P51693 650 aa25.91■■□□□ 1.74
CDH11-218ENST00000569783 C2CD5Q86YS7 1000 aa25.91■■□□□ 1.74
CDH11-218ENST00000569783 TTLL6Q8N841 843 aa25.91■■□□□ 1.74
CDH11-218ENST00000569783 RSPH6AQ9H0K4 717 aa25.91■■□□□ 1.74
CDH11-218ENST00000569783 IL6STP40189 918 aaPredicted RBP25.9■■□□□ 1.74
CDH11-218ENST00000569783 PHACTR3Q96KR7 559 aa25.9■■□□□ 1.74
CDH11-218ENST00000569783 U2AF1L5P0DN76 240 aaPredicted RBP25.89■■□□□ 1.74
CDH11-218ENST00000569783 U2AF1Q01081 240 aaKnown RBP eCLIP25.89■■□□□ 1.74
CDH11-218ENST00000569783 RTF1Q92541 710 aaKnown RBP25.89■■□□□ 1.74
CDH11-218ENST00000569783 CEMIPQ8WUJ3 1361 aa25.89■■□□□ 1.74
CDH11-218ENST00000569783 AFDNP55196 1824 aaKnown RBP25.88■■□□□ 1.73
CDH11-218ENST00000569783 TBC1D9BQ66K14 1250 aa25.88■■□□□ 1.73
CDH11-218ENST00000569783 TBC1D2BQ9UPU7 963 aa25.88■■□□□ 1.73
CDH11-218ENST00000569783 NRXN2Q9P2S2 1712 aa25.88■■□□□ 1.73
CDH11-218ENST00000569783 RBM46Q8TBY0 533 aaKnown RBP25.87■■□□□ 1.73
CDH11-218ENST00000569783 PDZRN3Q9UPQ7 1066 aa25.87■■□□□ 1.73
CDH11-218ENST00000569783 NPHP1O15259 732 aa25.86■■□□□ 1.73
CDH11-218ENST00000569783 A1BGP04217 495 aa25.86■■□□□ 1.73
CDH11-218ENST00000569783 RASSF7Q02833 373 aa25.86■■□□□ 1.73
CDH11-218ENST00000569783 ZC3H4Q9UPT8 1303 aaKnown RBP25.86■■□□□ 1.73
CDH11-218ENST00000569783 LMNB1P20700 586 aa25.85■■□□□ 1.73
CDH11-218ENST00000569783 PPP2R1AP30153 589 aa25.85■■□□□ 1.73
CDH11-218ENST00000569783 PDE6BP35913 854 aa25.85■■□□□ 1.73
CDH11-218ENST00000569783 CARMIL3Q8ND23 1372 aa25.84■■□□□ 1.73
CDH11-218ENST00000569783 SETDB2Q96T68 719 aa25.84■■□□□ 1.73
CDH11-218ENST00000569783 RRAGCQ9HB90 399 aa25.84■■□□□ 1.73
CDH11-218ENST00000569783 SIPA1L3O60292 1781 aaPredicted RBP25.83■■□□□ 1.73
CDH11-218ENST00000569783 KCNQ3O43525 872 aa25.83■■□□□ 1.73
CDH11-218ENST00000569783 ZNF622Q969S3 477 aaKnown RBP eCLIP25.83■■□□□ 1.73
CDH11-218ENST00000569783 BRIP1Q9BX63 1249 aa25.83■■□□□ 1.73
CDH11-218ENST00000569783 FSTL1Q12841 308 aa25.81■■□□□ 1.72
CDH11-218ENST00000569783 PRR5LQ6MZQ0 368 aa25.81■■□□□ 1.72
CDH11-218ENST00000569783 MCM10Q7L590 875 aa25.81■■□□□ 1.72
CDH11-218ENST00000569783 DZIP3Q86Y13 1208 aaKnown RBP25.81■■□□□ 1.72
CDH11-218ENST00000569783 CNBD1Q8NA66 436 aa25.8■■□□□ 1.72
CDH11-218ENST00000569783 USP16Q9Y5T5 823 aa25.8■■□□□ 1.72
CDH11-218ENST00000569783 CAMTA2O94983 1202 aa25.79■■□□□ 1.72
CDH11-218ENST00000569783 NEFMP07197 916 aa25.79■■□□□ 1.72
CDH11-218ENST00000569783 SNRPA1P09661 255 aaKnown RBP25.79■■□□□ 1.72
CDH11-218ENST00000569783 ST5P78524 1137 aa25.79■■□□□ 1.72
CDH11-218ENST00000569783 SCN7AQ01118 1682 aa25.79■■□□□ 1.72
CDH11-218ENST00000569783 DLEC1Q9Y238 1755 aa25.79■■□□□ 1.72
CDH11-218ENST00000569783 HTATSF1O43719 755 aaKnown RBP25.78■■□□□ 1.72
CDH11-218ENST00000569783 IFFO2Q5TF58 517 aa25.78■■□□□ 1.72
CDH11-218ENST00000569783 CCDC24Q8N4L8 307 aa25.78■■□□□ 1.72
CDH11-218ENST00000569783 SBF1O95248 1867 aa25.78■■□□□ 1.72
CDH11-218ENST00000569783 ZNF652Q9Y2D9 606 aa25.77■■□□□ 1.72
CDH11-218ENST00000569783 GLTPD2A6NH11 291 aa25.76■■□□□ 1.71
CDH11-218ENST00000569783 TNRC6CQ9HCJ0 1690 aaKnown RBP25.75■■□□□ 1.71
CDH11-218ENST00000569783 NFKBIEO00221 500 aa25.75■■□□□ 1.71
CDH11-218ENST00000569783 C21orf2O43822 256 aa25.75■■□□□ 1.71
CDH11-218ENST00000569783 PIP4K2AP48426 406 aaPredicted RBP25.75■■□□□ 1.71
CDH11-218ENST00000569783 DCTN1Q14203 1278 aa25.75■■□□□ 1.71
CDH11-218ENST00000569783 SMC1BQ8NDV3 1235 aa25.75■■□□□ 1.71
CDH11-218ENST00000569783 ZNF219Q9P2Y4 722 aaPredicted RBP25.75■■□□□ 1.71
CDH11-218ENST00000569783 PRAMEF22A3QJZ6 481 aa25.74■■□□□ 1.71
CDH11-218ENST00000569783 VEGFAP15692 232 aaPredicted RBP25.74■■□□□ 1.71
CDH11-218ENST00000569783 PRELPP51888 382 aa25.74■■□□□ 1.71
CDH11-218ENST00000569783 CLEC4GQ6UXB4 293 aa25.74■■□□□ 1.71
CDH11-218ENST00000569783 CNKSR1Q969H4 720 aa25.74■■□□□ 1.71
CDH11-218ENST00000569783 DPY19L2Q6NUT2 758 aa25.73■■□□□ 1.71
CDH11-218ENST00000569783 DNAJC5GQ8N7S2 189 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms