RNA–Protein interactions for RNA: ENST00000569769.1

SPSB3-212, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-212ENST00000569769 PLEKHF1Q96S99 279 aa16.73■□□□□ 0.27
SPSB3-212ENST00000569769 CCDC87Q9NVE4 849 aa16.73■□□□□ 0.27
SPSB3-212ENST00000569769 PARP3Q9Y6F1 533 aa16.73■□□□□ 0.27
SPSB3-212ENST00000569769 USP42Q9H9J4 1324 aaKnown RBP16.72■□□□□ 0.27
SPSB3-212ENST00000569769 DPEP1P16444 411 aa16.72■□□□□ 0.27
SPSB3-212ENST00000569769 DDR1Q08345 913 aa16.72■□□□□ 0.27
SPSB3-212ENST00000569769 IL17REQ8NFR9 667 aa16.72■□□□□ 0.27
SPSB3-212ENST00000569769 BCS1LQ9Y276 419 aa16.72■□□□□ 0.27
SPSB3-212ENST00000569769 CEMIPQ8WUJ3 1361 aa16.7■□□□□ 0.26
SPSB3-212ENST00000569769 CYP19A1P11511 503 aaPredicted RBP16.7■□□□□ 0.26
SPSB3-212ENST00000569769 TGFB2P61812 414 aa16.7■□□□□ 0.26
SPSB3-212ENST00000569769 GPBP1L1Q9HC44 474 aaPredicted RBP16.7■□□□□ 0.26
SPSB3-212ENST00000569769 ZBTB1Q9Y2K1 713 aa16.7■□□□□ 0.26
SPSB3-212ENST00000569769 SOS1Q07889 1333 aaPredicted RBP16.7■□□□□ 0.26
SPSB3-212ENST00000569769 DLG5Q8TDM6 1919 aa16.69■□□□□ 0.26
SPSB3-212ENST00000569769 USPL1Q5W0Q7 1092 aa16.69■□□□□ 0.26
SPSB3-212ENST00000569769 SBF1O95248 1867 aa16.69■□□□□ 0.26
SPSB3-212ENST00000569769 MAPK8IP3Q9UPT6 1336 aa16.69■□□□□ 0.26
SPSB3-212ENST00000569769 COL15A1P39059 1388 aa16.68■□□□□ 0.26
SPSB3-212ENST00000569769 NEFMP07197 916 aa16.68■□□□□ 0.26
SPSB3-212ENST00000569769 TEFQ10587 303 aa16.68■□□□□ 0.26
SPSB3-212ENST00000569769 WDR43Q15061 677 aaKnown RBP eCLIP16.68■□□□□ 0.26
SPSB3-212ENST00000569769 CCDC184Q52MB2 194 aa16.68■□□□□ 0.26
SPSB3-212ENST00000569769 MCM10Q7L590 875 aa16.68■□□□□ 0.26
SPSB3-212ENST00000569769 ANP32CO43423 234 aa16.67■□□□□ 0.26
SPSB3-212ENST00000569769 ZPR1O75312 459 aa16.67■□□□□ 0.26
SPSB3-212ENST00000569769 KCNA3P22001 575 aa16.67■□□□□ 0.26
SPSB3-212ENST00000569769 DCTN1Q14203 1278 aa16.67■□□□□ 0.26
SPSB3-212ENST00000569769 NFE2L2Q16236 605 aa16.67■□□□□ 0.26
SPSB3-212ENST00000569769 NRXN2Q9P2S2 1712 aa16.67■□□□□ 0.26
SPSB3-212ENST00000569769 CCDC88AQ3V6T2 1871 aa16.67■□□□□ 0.26
SPSB3-212ENST00000569769 POLRMTO00411 1230 aaKnown RBP16.66■□□□□ 0.26
SPSB3-212ENST00000569769 CANXP27824 592 aaKnown RBP16.66■□□□□ 0.26
SPSB3-212ENST00000569769 ARHGAP27Q6ZUM4 889 aa16.66■□□□□ 0.26
SPSB3-212ENST00000569769 CCDC146Q8IYE0 955 aa16.66■□□□□ 0.26
SPSB3-212ENST00000569769 RTF1Q92541 710 aaKnown RBP16.66■□□□□ 0.26
SPSB3-212ENST00000569769 PNNQ9H307 717 aaKnown RBP16.66■□□□□ 0.26
SPSB3-212ENST00000569769 DLEC1Q9Y238 1755 aa16.66■□□□□ 0.26
SPSB3-212ENST00000569769 TM4SF1P30408 202 aa16.65■□□□□ 0.26
SPSB3-212ENST00000569769 CHRNA5P30532 468 aa16.65■□□□□ 0.26
SPSB3-212ENST00000569769 TTC5Q8N0Z6 440 aa16.65■□□□□ 0.26
SPSB3-212ENST00000569769 ADAMTS8Q9UP79 889 aa16.65■□□□□ 0.26
SPSB3-212ENST00000569769 ZNF496Q96IT1 587 aaPredicted RBP16.64■□□□□ 0.25
SPSB3-212ENST00000569769 BCL2L12Q9HB09 334 aa16.64■□□□□ 0.25
SPSB3-212ENST00000569769 NARFQ9UHQ1 456 aa16.64■□□□□ 0.25
SPSB3-212ENST00000569769 ANKRD31Q8N7Z5 1873 aa16.64■□□□□ 0.25
SPSB3-212ENST00000569769 CACNA1SQ13698 1873 aa16.63■□□□□ 0.25
SPSB3-212ENST00000569769 SCN7AQ01118 1682 aa16.63■□□□□ 0.25
SPSB3-212ENST00000569769 HTATSF1O43719 755 aaKnown RBP16.63■□□□□ 0.25
SPSB3-212ENST00000569769 NFIXQ14938 502 aa16.63■□□□□ 0.25
SPSB3-212ENST00000569769 VSIG10Q8N0Z9 540 aa16.63■□□□□ 0.25
SPSB3-212ENST00000569769 ZNF790Q6PG37 636 aa16.62■□□□□ 0.25
SPSB3-212ENST00000569769 THUMPD2Q9BTF0 503 aaKnown RBP16.62■□□□□ 0.25
SPSB3-212ENST00000569769 PIM2Q9P1W9 311 aa16.62■□□□□ 0.25
SPSB3-212ENST00000569769 HEG1Q9ULI3 1381 aa16.62■□□□□ 0.25
SPSB3-212ENST00000569769 BTBD11A6QL63 1104 aa16.61■□□□□ 0.25
SPSB3-212ENST00000569769 KCNQ3O43525 872 aa16.61■□□□□ 0.25
SPSB3-212ENST00000569769 RUNDC1Q96C34 613 aa16.61■□□□□ 0.25
SPSB3-212ENST00000569769 RRP7AQ9Y3A4 280 aaKnown RBP16.61■□□□□ 0.25
SPSB3-212ENST00000569769 ZNF330Q9Y3S2 320 aaPredicted RBP16.61■□□□□ 0.25
SPSB3-212ENST00000569769 BCORQ6W2J9 1755 aa16.6■□□□□ 0.25
SPSB3-212ENST00000569769 KIF3CO14782 793 aa16.6■□□□□ 0.25
SPSB3-212ENST00000569769 TMPOP42166 694 aaKnown RBP16.6■□□□□ 0.25
SPSB3-212ENST00000569769 RIPK4P57078 832 aa16.6■□□□□ 0.25
SPSB3-212ENST00000569769 DALRD3Q5D0E6 543 aaKnown RBP16.6■□□□□ 0.25
SPSB3-212ENST00000569769 BICDL1Q6ZP65 573 aa16.6■□□□□ 0.25
SPSB3-212ENST00000569769 CARMIL3Q8ND23 1372 aa16.6■□□□□ 0.25
SPSB3-212ENST00000569769 COL11A2P13942 1736 aaPredicted RBP16.59■□□□□ 0.25
SPSB3-212ENST00000569769 STARD3NLO95772 234 aa16.59■□□□□ 0.25
SPSB3-212ENST00000569769 EIF5P55010 431 aaKnown RBP16.59■□□□□ 0.25
SPSB3-212ENST00000569769 MRS2Q9HD23 443 aa16.59■□□□□ 0.25
SPSB3-212ENST00000569769 KDM3BQ7LBC6 1761 aa16.59■□□□□ 0.25
SPSB3-212ENST00000569769 SERPINB2P05120 415 aa16.58■□□□□ 0.24
SPSB3-212ENST00000569769 C9orf131Q5VYM1 1079 aa16.58■□□□□ 0.24
SPSB3-212ENST00000569769 A1BGP04217 495 aa16.57■□□□□ 0.24
SPSB3-212ENST00000569769 PIP4K2AP48426 406 aaPredicted RBP16.57■□□□□ 0.24
SPSB3-212ENST00000569769 NEUROD2Q15784 382 aa16.57■□□□□ 0.24
SPSB3-212ENST00000569769 FMNL2Q96PY5 1086 aa16.57■□□□□ 0.24
SPSB3-212ENST00000569769 MIS18AQ9NYP9 233 aa16.57■□□□□ 0.24
SPSB3-212ENST00000569769 TBC1D2BQ9UPU7 963 aa16.57■□□□□ 0.24
SPSB3-212ENST00000569769 PRAMEF22A3QJZ6 481 aa16.56■□□□□ 0.24
SPSB3-212ENST00000569769 TAF7Q15545 349 aaPredicted RBP16.56■□□□□ 0.24
SPSB3-212ENST00000569769 TBC1D9BQ66K14 1250 aa16.56■□□□□ 0.24
SPSB3-212ENST00000569769 CCDC24Q8N4L8 307 aa16.56■□□□□ 0.24
SPSB3-212ENST00000569769 PNISRQ8TF01 805 aaKnown RBP16.56■□□□□ 0.24
SPSB3-212ENST00000569769 NMRK2Q9NPI5 230 aa16.56■□□□□ 0.24
SPSB3-212ENST00000569769 RASSF7Q02833 373 aa16.55■□□□□ 0.24
SPSB3-212ENST00000569769 RNF181Q9P0P0 153 aa16.55■□□□□ 0.24
SPSB3-212ENST00000569769 TRIM35Q9UPQ4 493 aa16.55■□□□□ 0.24
SPSB3-212ENST00000569769 TIAM2Q8IVF5 1701 aa16.55■□□□□ 0.24
SPSB3-212ENST00000569769 A0A087WZG4 1122 aa16.54■□□□□ 0.24
SPSB3-212ENST00000569769 HSPA6P17066 643 aa16.54■□□□□ 0.24
SPSB3-212ENST00000569769 LMOD3Q0VAK6 560 aa16.54■□□□□ 0.24
SPSB3-212ENST00000569769 C2CD5Q86YS7 1000 aa16.54■□□□□ 0.24
SPSB3-212ENST00000569769 APAF1O14727 1248 aa16.53■□□□□ 0.24
SPSB3-212ENST00000569769 TEX13AQ9BXU3 409 aaPredicted RBP16.53■□□□□ 0.24
SPSB3-212ENST00000569769 USP16Q9Y5T5 823 aa16.53■□□□□ 0.24
SPSB3-212ENST00000569769 LAMB4A4D0S4 1761 aa16.53■□□□□ 0.24
SPSB3-212ENST00000569769 IL6STP40189 918 aaPredicted RBP16.52■□□□□ 0.24
SPSB3-212ENST00000569769 DICER1Q9UPY3 1922 aaKnown RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms