RNA–Protein interactions for RNA: ENST00000569706.5

RHOT2-223, Transcript of ras homolog family member T2, human

TSL 3

Gene RHOT2, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT2-223	ENST00000569706	CEMIP	Q8WUJ3	1361 aa		31.94	■■■□□ 2.7
RHOT2-223	ENST00000569706	U2SURP	O15042	1029 aa	Known RBP	31.94	■■■□□ 2.7
RHOT2-223	ENST00000569706	USPL1	Q5W0Q7	1092 aa		31.94	■■■□□ 2.7
RHOT2-223	ENST00000569706	GNAT3	A8MTJ3	354 aa		31.93	■■■□□ 2.7
RHOT2-223	ENST00000569706	ZPR1	O75312	459 aa		31.92	■■■□□ 2.7
RHOT2-223	ENST00000569706	BCL2L12	Q9HB09	334 aa		31.92	■■■□□ 2.7
RHOT2-223	ENST00000569706	AFDN	P55196	1824 aa	Known RBP	31.91	■■■□□ 2.7
RHOT2-223	ENST00000569706	FCHSD2	O94868	740 aa		31.9	■■■□□ 2.7
RHOT2-223	ENST00000569706	RSPH6A	Q9H0K4	717 aa		31.9	■■■□□ 2.7
RHOT2-223	ENST00000569706	PIM2	Q9P1W9	311 aa		31.9	■■■□□ 2.7
RHOT2-223	ENST00000569706	ZNF790	Q6PG37	636 aa		31.89	■■■□□ 2.7
RHOT2-223	ENST00000569706	EIF5	P55010	431 aa	Known RBP	31.88	■■■□□ 2.69
RHOT2-223	ENST00000569706	NFIX	Q14938	502 aa		31.88	■■■□□ 2.69
RHOT2-223	ENST00000569706	ZNF496	Q96IT1	587 aa	Predicted RBP	31.88	■■■□□ 2.69
RHOT2-223	ENST00000569706	HEG1	Q9ULI3	1381 aa		31.88	■■■□□ 2.69
RHOT2-223	ENST00000569706	KIF3C	O14782	793 aa		31.87	■■■□□ 2.69
RHOT2-223	ENST00000569706	TTC5	Q8N0Z6	440 aa		31.87	■■■□□ 2.69
RHOT2-223	ENST00000569706	PHACTR3	Q96KR7	559 aa		31.87	■■■□□ 2.69
RHOT2-223	ENST00000569706	TEF	Q10587	303 aa		31.86	■■■□□ 2.69
RHOT2-223	ENST00000569706	ZNF526	Q8TF50	670 aa	Predicted RBP	31.86	■■■□□ 2.69
RHOT2-223	ENST00000569706	CFAP53	Q96M91	514 aa		31.86	■■■□□ 2.69
RHOT2-223	ENST00000569706	STARD3NL	O95772	234 aa		31.85	■■■□□ 2.69
RHOT2-223	ENST00000569706	CNGB1	Q14028	1251 aa	Predicted RBP	31.85	■■■□□ 2.69
RHOT2-223	ENST00000569706	ARHGAP27	Q6ZUM4	889 aa		31.85	■■■□□ 2.69
RHOT2-223	ENST00000569706	PPP2R1A	P30153	589 aa		31.84	■■■□□ 2.69
RHOT2-223	ENST00000569706	PRKAR2B	P31323	418 aa		31.84	■■■□□ 2.69
RHOT2-223	ENST00000569706	TEX13A	Q9BXU3	409 aa	Predicted RBP	31.84	■■■□□ 2.69
RHOT2-223	ENST00000569706	CHRNA5	P30532	468 aa		31.83	■■■□□ 2.69
RHOT2-223	ENST00000569706	DALRD3	Q5D0E6	543 aa	Known RBP	31.83	■■■□□ 2.69
RHOT2-223	ENST00000569706	DLEC1	Q9Y238	1755 aa		31.82	■■■□□ 2.68
RHOT2-223	ENST00000569706	CANX	P27824	592 aa	Known RBP	31.81	■■■□□ 2.68
RHOT2-223	ENST00000569706	SCN7A	Q01118	1682 aa		31.8	■■■□□ 2.68
RHOT2-223	ENST00000569706	NUDC	Q9Y266	331 aa		31.8	■■■□□ 2.68
RHOT2-223	ENST00000569706		A0A087WZG4	1122 aa		31.79	■■■□□ 2.68
RHOT2-223	ENST00000569706	SERPINB2	P05120	415 aa		31.78	■■■□□ 2.68
RHOT2-223	ENST00000569706	FMNL2	Q96PY5	1086 aa		31.78	■■■□□ 2.68
RHOT2-223	ENST00000569706	SBF1	O95248	1867 aa		31.78	■■■□□ 2.68
RHOT2-223	ENST00000569706	IL6ST	P40189	918 aa	Predicted RBP	31.77	■■■□□ 2.68
RHOT2-223	ENST00000569706	HSPA6	P17066	643 aa		31.76	■■■□□ 2.67
RHOT2-223	ENST00000569706	C9orf131	Q5VYM1	1079 aa		31.75	■■■□□ 2.67
RHOT2-223	ENST00000569706	KCNQ3	O43525	872 aa		31.74	■■■□□ 2.67
RHOT2-223	ENST00000569706	CARMIL3	Q8ND23	1372 aa		31.73	■■■□□ 2.67
RHOT2-223	ENST00000569706	BTBD11	A6QL63	1104 aa		31.73	■■■□□ 2.67
RHOT2-223	ENST00000569706	U2AF1L5	P0DN76	240 aa	Predicted RBP	31.73	■■■□□ 2.67
RHOT2-223	ENST00000569706	U2AF1	Q01081	240 aa	Known RBP eCLIP	31.73	■■■□□ 2.67
RHOT2-223	ENST00000569706	HTATSF1	O43719	755 aa	Known RBP	31.71	■■■□□ 2.67
RHOT2-223	ENST00000569706	ANKRD31	Q8N7Z5	1873 aa		31.71	■■■□□ 2.67
RHOT2-223	ENST00000569706	A1BG	P04217	495 aa		31.7	■■■□□ 2.67
RHOT2-223	ENST00000569706	TBC1D9B	Q66K14	1250 aa		31.7	■■■□□ 2.67
RHOT2-223	ENST00000569706	BCOR	Q6W2J9	1755 aa		31.69	■■■□□ 2.66
RHOT2-223	ENST00000569706	TOMM70	O94826	608 aa		31.68	■■■□□ 2.66
RHOT2-223	ENST00000569706	NMRK2	Q9NPI5	230 aa		31.68	■■■□□ 2.66
RHOT2-223	ENST00000569706	CAMTA2	O94983	1202 aa		31.67	■■■□□ 2.66
RHOT2-223	ENST00000569706	TBC1D2B	Q9UPU7	963 aa		31.67	■■■□□ 2.66
RHOT2-223	ENST00000569706	USP16	Q9Y5T5	823 aa		31.67	■■■□□ 2.66
RHOT2-223	ENST00000569706	MCM10	Q7L590	875 aa		31.65	■■■□□ 2.66
RHOT2-223	ENST00000569706	TTLL6	Q8N841	843 aa		31.65	■■■□□ 2.66
RHOT2-223	ENST00000569706	RNF181	Q9P0P0	153 aa		31.65	■■■□□ 2.66
RHOT2-223	ENST00000569706	PDZRN3	Q9UPQ7	1066 aa		31.65	■■■□□ 2.66
RHOT2-223	ENST00000569706	ZC3H4	Q9UPT8	1303 aa	Known RBP	31.65	■■■□□ 2.66
RHOT2-223	ENST00000569706	BICDL1	Q6ZP65	573 aa		31.64	■■■□□ 2.66
RHOT2-223	ENST00000569706	C2CD5	Q86YS7	1000 aa		31.64	■■■□□ 2.66
RHOT2-223	ENST00000569706	RTF1	Q92541	710 aa	Known RBP	31.64	■■■□□ 2.66
RHOT2-223	ENST00000569706	BRIP1	Q9BX63	1249 aa		31.64	■■■□□ 2.66
RHOT2-223	ENST00000569706	PRR5L	Q6MZQ0	368 aa		31.63	■■■□□ 2.65
RHOT2-223	ENST00000569706		H0YIN7	160 aa		31.62	■■■□□ 2.65
RHOT2-223	ENST00000569706	SNRPA1	P09661	255 aa	Known RBP	31.62	■■■□□ 2.65
RHOT2-223	ENST00000569706	COL11A2	P13942	1736 aa	Predicted RBP	31.62	■■■□□ 2.65
RHOT2-223	ENST00000569706	PRAMEF22	A3QJZ6	481 aa		31.61	■■■□□ 2.65
RHOT2-223	ENST00000569706	PRELP	P51888	382 aa		31.61	■■■□□ 2.65
RHOT2-223	ENST00000569706	RGL2	O15211	777 aa		31.6	■■■□□ 2.65
RHOT2-223	ENST00000569706	DCTN1	Q14203	1278 aa		31.6	■■■□□ 2.65
RHOT2-223	ENST00000569706	KDM2B	Q8NHM5	1336 aa		31.59	■■■□□ 2.65
RHOT2-223	ENST00000569706	RASSF7	Q02833	373 aa		31.59	■■■□□ 2.65
RHOT2-223	ENST00000569706	DZIP3	Q86Y13	1208 aa	Known RBP	31.59	■■■□□ 2.65
RHOT2-223	ENST00000569706	TNRC6C	Q9HCJ0	1690 aa	Known RBP	31.59	■■■□□ 2.65
RHOT2-223	ENST00000569706	DLG5	Q8TDM6	1919 aa		31.59	■■■□□ 2.65
RHOT2-223	ENST00000569706	PDE6B	P35913	854 aa		31.58	■■■□□ 2.65
RHOT2-223	ENST00000569706	CLEC4G	Q6UXB4	293 aa		31.58	■■■□□ 2.65
RHOT2-223	ENST00000569706	RBM46	Q8TBY0	533 aa	Known RBP	31.58	■■■□□ 2.65
RHOT2-223	ENST00000569706	PLEKHF1	Q96S99	279 aa		31.58	■■■□□ 2.65
RHOT2-223	ENST00000569706	ZNF330	Q9Y3S2	320 aa	Predicted RBP	31.58	■■■□□ 2.65
RHOT2-223	ENST00000569706	NFKBIE	O00221	500 aa		31.57	■■■□□ 2.64
RHOT2-223	ENST00000569706	LMNB1	P20700	586 aa		31.57	■■■□□ 2.64
RHOT2-223	ENST00000569706	TAF7	Q15545	349 aa	Predicted RBP	31.57	■■■□□ 2.64
RHOT2-223	ENST00000569706	SETDB2	Q96T68	719 aa		31.57	■■■□□ 2.64
RHOT2-223	ENST00000569706	NBPF26	B4DH59	902 aa		31.55	■■■□□ 2.64
RHOT2-223	ENST00000569706	NBPF10	Q6P3W6	841 aa	Known RBP	31.55	■■■□□ 2.64
RHOT2-223	ENST00000569706	NBPF15	Q8N660	670 aa		31.55	■■■□□ 2.64
RHOT2-223	ENST00000569706	FER1L6	Q2WGJ9	1857 aa		31.55	■■■□□ 2.64
RHOT2-223	ENST00000569706	KDM3B	Q7LBC6	1761 aa		31.54	■■■□□ 2.64
RHOT2-223	ENST00000569706	APLP1	P51693	650 aa		31.54	■■■□□ 2.64
RHOT2-223	ENST00000569706	NPM2	Q86SE8	214 aa	Known RBP	31.54	■■■□□ 2.64
RHOT2-223	ENST00000569706	CCDC88A	Q3V6T2	1871 aa		31.54	■■■□□ 2.64
RHOT2-223	ENST00000569706	LAMB4	A4D0S4	1761 aa		31.53	■■■□□ 2.64
RHOT2-223	ENST00000569706	PIP4K2A	P48426	406 aa	Predicted RBP	31.53	■■■□□ 2.64
RHOT2-223	ENST00000569706	CNBD1	Q8NA66	436 aa		31.52	■■■□□ 2.64
RHOT2-223	ENST00000569706	ARFGEF2	Q9Y6D5	1785 aa		31.52	■■■□□ 2.64
RHOT2-223	ENST00000569706	TIAM2	Q8IVF5	1701 aa		31.5	■■■□□ 2.63
RHOT2-223	ENST00000569706	SRGN	P10124	158 aa		31.5	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms