RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 CEP85Q6P2H3 762 aa6.72□□□□□ -1.33
SF3B3-213ENST00000569687 BARGINQ6ZT62 677 aa6.72□□□□□ -1.33
SF3B3-213ENST00000569687 FBXO22Q8NEZ5 403 aa6.72□□□□□ -1.33
SF3B3-213ENST00000569687 LNPKQ9C0E8 428 aa6.72□□□□□ -1.33
SF3B3-213ENST00000569687 USP35Q9P2H5 1018 aa6.72□□□□□ -1.33
SF3B3-213ENST00000569687 SOS2Q07890 1332 aaPredicted RBP6.72□□□□□ -1.33
SF3B3-213ENST00000569687 SPATA31A3Q5VYP0 1347 aa6.72□□□□□ -1.33
SF3B3-213ENST00000569687 HMMRO75330 724 aa6.71□□□□□ -1.34
SF3B3-213ENST00000569687 GNAI2P04899 355 aa6.71□□□□□ -1.34
SF3B3-213ENST00000569687 FLIIQ13045 1269 aa6.71□□□□□ -1.34
SF3B3-213ENST00000569687 BECN1Q14457 450 aa6.71□□□□□ -1.34
SF3B3-213ENST00000569687 ZNF530Q6P9A1 599 aaPredicted RBP6.71□□□□□ -1.34
SF3B3-213ENST00000569687 USHBP1Q8N6Y0 703 aa6.71□□□□□ -1.34
SF3B3-213ENST00000569687 LRRC37A3O60309 1634 aa6.71□□□□□ -1.34
SF3B3-213ENST00000569687 CRYBG1Q9Y4K1 1723 aa6.7□□□□□ -1.34
SF3B3-213ENST00000569687 ATP10DQ9P241 1426 aa6.7□□□□□ -1.34
SF3B3-213ENST00000569687 AHDC1Q5TGY3 1603 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-213ENST00000569687 RBM25P49756 843 aaKnown RBP6.7□□□□□ -1.34
SF3B3-213ENST00000569687 ATP8B2P98198 1209 aa6.7□□□□□ -1.34
SF3B3-213ENST00000569687 PLEKHM2Q8IWE5 1019 aa6.7□□□□□ -1.34
SF3B3-213ENST00000569687 EFCAB3Q8N7B9 438 aa6.7□□□□□ -1.34
SF3B3-213ENST00000569687 LRRC59Q96AG4 307 aaKnown RBP6.7□□□□□ -1.34
SF3B3-213ENST00000569687 MEIS3Q99687 375 aa6.7□□□□□ -1.34
SF3B3-213ENST00000569687 C22orf23Q9BZE7 217 aa6.7□□□□□ -1.34
SF3B3-213ENST00000569687 OSBPL3Q9H4L5 887 aa6.7□□□□□ -1.34
SF3B3-213ENST00000569687 C1orf115Q9H7X2 142 aa6.7□□□□□ -1.34
SF3B3-213ENST00000569687 PODXL2Q9NZ53 605 aa6.7□□□□□ -1.34
SF3B3-213ENST00000569687 ROBO1Q9Y6N7 1651 aa6.7□□□□□ -1.34
SF3B3-213ENST00000569687 ERBB3P21860 1342 aa6.7□□□□□ -1.34
SF3B3-213ENST00000569687 CPDO75976 1380 aa6.69□□□□□ -1.34
SF3B3-213ENST00000569687 IBTKQ9P2D0 1353 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-213ENST00000569687 LTN1O94822 1766 aa6.69□□□□□ -1.34
SF3B3-213ENST00000569687 BTBD11A6QL63 1104 aa6.69□□□□□ -1.34
SF3B3-213ENST00000569687 F6X3S4 739 aa6.69□□□□□ -1.34
SF3B3-213ENST00000569687 PITPNM1O00562 1244 aa6.69□□□□□ -1.34
SF3B3-213ENST00000569687 GIGYF1O75420 1035 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-213ENST00000569687 TEFQ10587 303 aa6.69□□□□□ -1.34
SF3B3-213ENST00000569687 FKBP5Q13451 457 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-213ENST00000569687 C1orf141Q5JVX7 400 aa6.69□□□□□ -1.34
SF3B3-213ENST00000569687 HDGFL1Q5TGJ6 251 aa6.69□□□□□ -1.34
SF3B3-213ENST00000569687 MPRIPQ6WCQ1 1025 aa6.69□□□□□ -1.34
SF3B3-213ENST00000569687 POTEDQ86YR6 584 aa6.69□□□□□ -1.34
SF3B3-213ENST00000569687 ZNF579Q8NAF0 562 aaKnown RBP6.69□□□□□ -1.34
SF3B3-213ENST00000569687 LARP6Q9BRS8 491 aaKnown RBP6.69□□□□□ -1.34
SF3B3-213ENST00000569687 USP44Q9H0E7 712 aa6.69□□□□□ -1.34
SF3B3-213ENST00000569687 GPBP1L1Q9HC44 474 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-213ENST00000569687 SPG7Q9UQ90 795 aa6.69□□□□□ -1.34
SF3B3-213ENST00000569687 ABCC6O95255 1503 aa6.69□□□□□ -1.34
SF3B3-213ENST00000569687 KCNQ3O43525 872 aa6.68□□□□□ -1.34
SF3B3-213ENST00000569687 ZC3H6P61129 1189 aaKnown RBP6.68□□□□□ -1.34
SF3B3-213ENST00000569687 CACNB1Q02641 598 aaPredicted RBP6.68□□□□□ -1.34
SF3B3-213ENST00000569687 SLC4A10Q6U841 1118 aa6.68□□□□□ -1.34
SF3B3-213ENST00000569687 IL27Q8NEV9 243 aa6.68□□□□□ -1.34
SF3B3-213ENST00000569687 SNX21Q969T3 373 aa6.68□□□□□ -1.34
SF3B3-213ENST00000569687 AK7Q96M32 723 aa6.68□□□□□ -1.34
SF3B3-213ENST00000569687 DBF4Q9UBU7 674 aaPredicted RBP6.68□□□□□ -1.34
SF3B3-213ENST00000569687 HDAC5Q9UQL6 1122 aa6.68□□□□□ -1.34
SF3B3-213ENST00000569687 CAMTA1Q9Y6Y1 1673 aa6.68□□□□□ -1.34
SF3B3-213ENST00000569687 CACNA1FO60840 1977 aa6.68□□□□□ -1.34
SF3B3-213ENST00000569687 ABCA3Q99758 1704 aa6.67□□□□□ -1.34
SF3B3-213ENST00000569687 PXDNLA1KZ92 1463 aa6.67□□□□□ -1.34
SF3B3-213ENST00000569687 TOM1O60784 492 aa6.67□□□□□ -1.34
SF3B3-213ENST00000569687 CDC45O75419 566 aa6.67□□□□□ -1.34
SF3B3-213ENST00000569687 ALDH1L1O75891 902 aa6.67□□□□□ -1.34
SF3B3-213ENST00000569687 HSP90AB1P08238 724 aaKnown RBP6.67□□□□□ -1.34
SF3B3-213ENST00000569687 TATP17735 454 aaPredicted RBP6.67□□□□□ -1.34
SF3B3-213ENST00000569687 BEND3Q5T5X7 828 aa6.67□□□□□ -1.34
SF3B3-213ENST00000569687 TTC22Q5TAA0 569 aa6.67□□□□□ -1.34
SF3B3-213ENST00000569687 CHADLQ6NUI6 762 aa6.67□□□□□ -1.34
SF3B3-213ENST00000569687 IFNL2Q8IZJ0 200 aa6.67□□□□□ -1.34
SF3B3-213ENST00000569687 SSH3Q8TE77 659 aa6.67□□□□□ -1.34
SF3B3-213ENST00000569687 RAPGEF4Q8WZA2 1011 aa6.67□□□□□ -1.34
SF3B3-213ENST00000569687 SRCIN1Q9C0H9 1055 aa6.67□□□□□ -1.34
SF3B3-213ENST00000569687 ZMYND15Q9H091 742 aa6.67□□□□□ -1.34
SF3B3-213ENST00000569687 HYPKQ9NX55 129 aa6.67□□□□□ -1.34
SF3B3-213ENST00000569687 STAP2Q9UGK3 403 aa6.67□□□□□ -1.34
SF3B3-213ENST00000569687 LMO7Q8WWI1 1683 aa6.67□□□□□ -1.34
SF3B3-213ENST00000569687 VIRMAQ69YN4 1812 aaKnown RBP6.66□□□□□ -1.34
SF3B3-213ENST00000569687 ADAMTS7Q9UKP4 1686 aa6.66□□□□□ -1.34
SF3B3-213ENST00000569687 ZBTB7CA1YPR0 619 aa6.66□□□□□ -1.34
SF3B3-213ENST00000569687 RAB11FIP3O75154 756 aa6.66□□□□□ -1.34
SF3B3-213ENST00000569687 PHKG2P15735 406 aa6.66□□□□□ -1.34
SF3B3-213ENST00000569687 SLC4A3P48751 1232 aa6.66□□□□□ -1.34
SF3B3-213ENST00000569687 KSR2Q6VAB6 950 aa6.66□□□□□ -1.34
SF3B3-213ENST00000569687 TBC1D9Q6ZT07 1266 aa6.66□□□□□ -1.34
SF3B3-213ENST00000569687 C16orf71Q8IYS4 520 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-213ENST00000569687 CABLES1Q8TDN4 633 aa6.66□□□□□ -1.34
SF3B3-213ENST00000569687 DNAAF4Q8WXU2 420 aa6.66□□□□□ -1.34
SF3B3-213ENST00000569687 DCAF5Q96JK2 942 aa6.66□□□□□ -1.34
SF3B3-213ENST00000569687 TBC1D2Q9BYX2 928 aa6.66□□□□□ -1.34
SF3B3-213ENST00000569687 ANTXR1Q9H6X2 564 aa6.66□□□□□ -1.34
SF3B3-213ENST00000569687 PHAXQ9H814 394 aaKnown RBP6.66□□□□□ -1.34
SF3B3-213ENST00000569687 SLC52A2Q9HAB3 445 aa6.66□□□□□ -1.34
SF3B3-213ENST00000569687 NLRP2Q9NX02 1062 aa6.66□□□□□ -1.34
SF3B3-213ENST00000569687 COL18A1P39060 1754 aa6.66□□□□□ -1.34
SF3B3-213ENST00000569687 COL16A1Q07092 1604 aaPredicted RBP6.65□□□□□ -1.34
SF3B3-213ENST00000569687 COL22A1Q8NFW1 1626 aaPredicted RBP6.65□□□□□ -1.34
SF3B3-213ENST00000569687 PI4KAP2A4QPH2 592 aa6.65□□□□□ -1.34
SF3B3-213ENST00000569687 UBTFL1P0CB47 393 aaPredicted RBP6.65□□□□□ -1.34
SF3B3-213ENST00000569687 GSPT1P15170 499 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms