RNA–Protein interactions for RNA: ENST00000569566.2

MSLN-208, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-208ENST00000569566 IL17REQ8NFR9 667 aa24.81■■□□□ 1.56
MSLN-208ENST00000569566 CCDC88AQ3V6T2 1871 aa24.81■■□□□ 1.56
MSLN-208ENST00000569566 ARFGEF2Q9Y6D5 1785 aa24.8■■□□□ 1.56
MSLN-208ENST00000569566 PHACTR3Q96KR7 559 aa24.8■■□□□ 1.56
MSLN-208ENST00000569566 TIAM2Q8IVF5 1701 aa24.79■■□□□ 1.56
MSLN-208ENST00000569566 GNAT3A8MTJ3 354 aa24.79■■□□□ 1.56
MSLN-208ENST00000569566 HEG1Q9ULI3 1381 aa24.79■■□□□ 1.56
MSLN-208ENST00000569566 VSIG10Q8N0Z9 540 aa24.78■■□□□ 1.56
MSLN-208ENST00000569566 CFAP53Q96M91 514 aa24.78■■□□□ 1.56
MSLN-208ENST00000569566 PARP3Q9Y6F1 533 aa24.77■■□□□ 1.56
MSLN-208ENST00000569566 TGFB2P61812 414 aa24.76■■□□□ 1.55
MSLN-208ENST00000569566 ZNF496Q96IT1 587 aaPredicted RBP24.76■■□□□ 1.55
MSLN-208ENST00000569566 POLRMTO00411 1230 aaKnown RBP24.75■■□□□ 1.55
MSLN-208ENST00000569566 TEFQ10587 303 aa24.75■■□□□ 1.55
MSLN-208ENST00000569566 USPL1Q5W0Q7 1092 aa24.75■■□□□ 1.55
MSLN-208ENST00000569566 A0A0G2JLW4 131 aa24.74■■□□□ 1.55
MSLN-208ENST00000569566 DPEP1P16444 411 aa24.74■■□□□ 1.55
MSLN-208ENST00000569566 ZNF790Q6PG37 636 aa24.74■■□□□ 1.55
MSLN-208ENST00000569566 BCL2L12Q9HB09 334 aa24.74■■□□□ 1.55
MSLN-208ENST00000569566 CARMIL3Q8ND23 1372 aa24.73■■□□□ 1.55
MSLN-208ENST00000569566 GIGYF1O75420 1035 aaPredicted RBP24.73■■□□□ 1.55
MSLN-208ENST00000569566 C1QTNF8P60827 252 aa24.73■■□□□ 1.55
MSLN-208ENST00000569566 TTC5Q8N0Z6 440 aa24.73■■□□□ 1.55
MSLN-208ENST00000569566 KCNA3P22001 575 aa24.72■■□□□ 1.55
MSLN-208ENST00000569566 TM4SF1P30408 202 aa24.72■■□□□ 1.55
MSLN-208ENST00000569566 NARFQ9UHQ1 456 aa24.72■■□□□ 1.55
MSLN-208ENST00000569566 TNRC6CQ9HCJ0 1690 aaKnown RBP24.72■■□□□ 1.55
MSLN-208ENST00000569566 FER1L6Q2WGJ9 1857 aa24.7■■□□□ 1.55
MSLN-208ENST00000569566 U2AF1L5P0DN76 240 aaPredicted RBP24.7■■□□□ 1.54
MSLN-208ENST00000569566 U2AF1Q01081 240 aaKnown RBP eCLIP24.7■■□□□ 1.54
MSLN-208ENST00000569566 BCS1LQ9Y276 419 aa24.7■■□□□ 1.54
MSLN-208ENST00000569566 DICER1Q9UPY3 1922 aaKnown RBP24.7■■□□□ 1.54
MSLN-208ENST00000569566 NFIXQ14938 502 aa24.69■■□□□ 1.54
MSLN-208ENST00000569566 NUDCQ9Y266 331 aa24.69■■□□□ 1.54
MSLN-208ENST00000569566 KCNQ3O43525 872 aa24.68■■□□□ 1.54
MSLN-208ENST00000569566 ZPR1O75312 459 aa24.68■■□□□ 1.54
MSLN-208ENST00000569566 EIF5P55010 431 aaKnown RBP24.68■■□□□ 1.54
MSLN-208ENST00000569566 NUP98P52948 1817 aa24.68■■□□□ 1.54
MSLN-208ENST00000569566 CANXP27824 592 aaKnown RBP24.67■■□□□ 1.54
MSLN-208ENST00000569566 CEP350Q5VT06 3117 aa24.66■■□□□ 1.54
MSLN-208ENST00000569566 FCHSD2O94868 740 aa24.66■■□□□ 1.54
MSLN-208ENST00000569566 CHRNA5P30532 468 aa24.65■■□□□ 1.54
MSLN-208ENST00000569566 MCM10Q7L590 875 aa24.65■■□□□ 1.54
MSLN-208ENST00000569566 FMNL2Q96PY5 1086 aa24.65■■□□□ 1.54
MSLN-208ENST00000569566 STARD3NLO95772 234 aa24.64■■□□□ 1.54
MSLN-208ENST00000569566 ZNF526Q8TF50 670 aaPredicted RBP24.63■■□□□ 1.53
MSLN-208ENST00000569566 SENP3-EIF4A1A0A087X0R7 540 aa24.62■■□□□ 1.53
MSLN-208ENST00000569566 BTBD11A6QL63 1104 aa24.62■■□□□ 1.53
MSLN-208ENST00000569566 DCTN1Q14203 1278 aa24.62■■□□□ 1.53
MSLN-208ENST00000569566 GPBP1L1Q9HC44 474 aaPredicted RBP24.62■■□□□ 1.53
MSLN-208ENST00000569566 SLX4Q8IY92 1834 aa24.61■■□□□ 1.53
MSLN-208ENST00000569566 PRAMEF22A3QJZ6 481 aa24.61■■□□□ 1.53
MSLN-208ENST00000569566 IL6STP40189 918 aaPredicted RBP24.6■■□□□ 1.53
MSLN-208ENST00000569566 TEX13AQ9BXU3 409 aaPredicted RBP24.6■■□□□ 1.53
MSLN-208ENST00000569566 PIM2Q9P1W9 311 aa24.6■■□□□ 1.53
MSLN-208ENST00000569566 ANKRD36CQ5JPF3 1778 aa24.59■■□□□ 1.53
MSLN-208ENST00000569566 A1BGP04217 495 aa24.59■■□□□ 1.53
MSLN-208ENST00000569566 SERPINB2P05120 415 aa24.58■■□□□ 1.53
MSLN-208ENST00000569566 TBC1D9BQ66K14 1250 aa24.58■■□□□ 1.53
MSLN-208ENST00000569566 PLEKHF1Q96S99 279 aa24.58■■□□□ 1.53
MSLN-208ENST00000569566 A0A087WZG4 1122 aa24.57■■□□□ 1.52
MSLN-208ENST00000569566 DALRD3Q5D0E6 543 aaKnown RBP24.57■■□□□ 1.52
MSLN-208ENST00000569566 RTF1Q92541 710 aaKnown RBP24.57■■□□□ 1.52
MSLN-208ENST00000569566 ZNF330Q9Y3S2 320 aaPredicted RBP24.57■■□□□ 1.52
MSLN-208ENST00000569566 HTATSF1O43719 755 aaKnown RBP24.56■■□□□ 1.52
MSLN-208ENST00000569566 CAMTA2O94983 1202 aa24.56■■□□□ 1.52
MSLN-208ENST00000569566 PIP4K2AP48426 406 aaPredicted RBP24.56■■□□□ 1.52
MSLN-208ENST00000569566 ARHGAP27Q6ZUM4 889 aa24.56■■□□□ 1.52
MSLN-208ENST00000569566 TBC1D2BQ9UPU7 963 aa24.56■■□□□ 1.52
MSLN-208ENST00000569566 USP16Q9Y5T5 823 aa24.56■■□□□ 1.52
MSLN-208ENST00000569566 WDR90Q96KV7 1748 aa24.55■■□□□ 1.52
MSLN-208ENST00000569566 KIF3CO14782 793 aa24.55■■□□□ 1.52
MSLN-208ENST00000569566 BICDL1Q6ZP65 573 aa24.54■■□□□ 1.52
MSLN-208ENST00000569566 PRR5LQ6MZQ0 368 aa24.52■■□□□ 1.52
MSLN-208ENST00000569566 C9orf131Q5VYM1 1079 aa24.51■■□□□ 1.51
MSLN-208ENST00000569566 DZIP3Q86Y13 1208 aaKnown RBP24.51■■□□□ 1.51
MSLN-208ENST00000569566 NBPF26B4DH59 902 aa24.5■■□□□ 1.51
MSLN-208ENST00000569566 SNRPA1P09661 255 aaKnown RBP24.5■■□□□ 1.51
MSLN-208ENST00000569566 RASSF7Q02833 373 aa24.5■■□□□ 1.51
MSLN-208ENST00000569566 NBPF10Q6P3W6 841 aaKnown RBP24.5■■□□□ 1.51
MSLN-208ENST00000569566 NBPF15Q8N660 670 aa24.5■■□□□ 1.51
MSLN-208ENST00000569566 LAMB2P55268 1798 aa24.49■■□□□ 1.51
MSLN-208ENST00000569566 NFE2L2Q16236 605 aa24.49■■□□□ 1.51
MSLN-208ENST00000569566 THUMPD2Q9BTF0 503 aaKnown RBP24.49■■□□□ 1.51
MSLN-208ENST00000569566 PRELPP51888 382 aa24.48■■□□□ 1.51
MSLN-208ENST00000569566 C2CD5Q86YS7 1000 aa24.48■■□□□ 1.51
MSLN-208ENST00000569566 TAF7Q15545 349 aaPredicted RBP24.47■■□□□ 1.51
MSLN-208ENST00000569566 CCDC24Q8N4L8 307 aa24.47■■□□□ 1.51
MSLN-208ENST00000569566 NMRK2Q9NPI5 230 aa24.47■■□□□ 1.51
MSLN-208ENST00000569566 MIS18AQ9NYP9 233 aa24.47■■□□□ 1.51
MSLN-208ENST00000569566 RNF181Q9P0P0 153 aa24.47■■□□□ 1.51
MSLN-208ENST00000569566 CNBD1Q8NA66 436 aa24.45■■□□□ 1.5
MSLN-208ENST00000569566 MAPK8IP3Q9UPT6 1336 aa24.44■■□□□ 1.5
MSLN-208ENST00000569566 NFKBIEO00221 500 aa24.44■■□□□ 1.5
MSLN-208ENST00000569566 RALBP1Q15311 655 aa24.44■■□□□ 1.5
MSLN-208ENST00000569566 TTLL6Q8N841 843 aa24.44■■□□□ 1.5
MSLN-208ENST00000569566 BRIP1Q9BX63 1249 aa24.44■■□□□ 1.5
MSLN-208ENST00000569566 MYBBP1AQ9BQG0 1328 aaKnown RBP24.43■■□□□ 1.5
MSLN-208ENST00000569566 NEFMP07197 916 aa24.43■■□□□ 1.5
MSLN-208ENST00000569566 H0YIN7 160 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms