RNA–Protein interactions for RNA: ENST00000569506.1

NEIL1-223, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-223ENST00000569506 BRPF1P55201 1214 aaPredicted RBP20.85■□□□□ 0.93
NEIL1-223ENST00000569506 RRP1P56182 461 aaKnown RBP20.85■□□□□ 0.93
NEIL1-223ENST00000569506 CCDC30Q5VVM6 783 aa20.85■□□□□ 0.93
NEIL1-223ENST00000569506 ASAP1Q9ULH1 1129 aa20.85■□□□□ 0.93
NEIL1-223ENST00000569506 ATF5Q9Y2D1 282 aaPredicted RBP20.85■□□□□ 0.93
NEIL1-223ENST00000569506 SLC15A2Q16348 729 aa20.84■□□□□ 0.93
NEIL1-223ENST00000569506 TXNRD1Q16881 649 aa20.84■□□□□ 0.93
NEIL1-223ENST00000569506 HDGFL1Q5TGJ6 251 aa20.84■□□□□ 0.93
NEIL1-223ENST00000569506 SMARCC1Q92922 1105 aaPredicted RBP20.84■□□□□ 0.93
NEIL1-223ENST00000569506 SYT17Q9BSW7 474 aa20.84■□□□□ 0.93
NEIL1-223ENST00000569506 FHDC1Q9C0D6 1143 aaPredicted RBP20.84■□□□□ 0.93
NEIL1-223ENST00000569506 UBR2Q8IWV8 1755 aa20.84■□□□□ 0.93
NEIL1-223ENST00000569506 KCPQ6ZWJ8 1503 aa20.83■□□□□ 0.93
NEIL1-223ENST00000569506 VSIG10Q8N0Z9 540 aa20.83■□□□□ 0.93
NEIL1-223ENST00000569506 MRPL50Q8N5N7 158 aaKnown RBP20.83■□□□□ 0.93
NEIL1-223ENST00000569506 BCL2L13Q9BXK5 485 aa20.83■□□□□ 0.93
NEIL1-223ENST00000569506 MTFR1LQ9H019 292 aa20.83■□□□□ 0.93
NEIL1-223ENST00000569506 STK31Q9BXU1 1019 aa20.82■□□□□ 0.92
NEIL1-223ENST00000569506 NHSQ6T4R5 1651 aa20.82■□□□□ 0.92
NEIL1-223ENST00000569506 KIF16BQ96L93 1317 aa20.81■□□□□ 0.92
NEIL1-223ENST00000569506 PTCD1O75127 700 aaKnown RBP20.81■□□□□ 0.92
NEIL1-223ENST00000569506 SGIP1Q9BQI5 828 aa20.81■□□□□ 0.92
NEIL1-223ENST00000569506 TEX13AQ9BXU3 409 aaPredicted RBP20.81■□□□□ 0.92
NEIL1-223ENST00000569506 IPO8O15397 1037 aaKnown RBP20.8■□□□□ 0.92
NEIL1-223ENST00000569506 NEFLP07196 543 aa20.8■□□□□ 0.92
NEIL1-223ENST00000569506 EIF2S2P20042 333 aaKnown RBP20.8■□□□□ 0.92
NEIL1-223ENST00000569506 TCERG1O14776 1098 aaKnown RBP20.79■□□□□ 0.92
NEIL1-223ENST00000569506 CANXP27824 592 aaKnown RBP20.79■□□□□ 0.92
NEIL1-223ENST00000569506 RBM42Q9BTD8 480 aaKnown RBP20.79■□□□□ 0.92
NEIL1-223ENST00000569506 PRAMEF22A3QJZ6 481 aa20.78■□□□□ 0.92
NEIL1-223ENST00000569506 SLC4A2P04920 1241 aa20.78■□□□□ 0.92
NEIL1-223ENST00000569506 FRAT1Q92837 279 aaPredicted RBP20.78■□□□□ 0.92
NEIL1-223ENST00000569506 PALLDQ8WX93 1383 aa20.77■□□□□ 0.92
NEIL1-223ENST00000569506 C1QTNF8P60827 252 aa20.77■□□□□ 0.92
NEIL1-223ENST00000569506 ZKSCAN2Q63HK3 967 aa20.77■□□□□ 0.92
NEIL1-223ENST00000569506 ARHGAP45Q92619 1136 aa20.77■□□□□ 0.92
NEIL1-223ENST00000569506 NECTIN2Q92692 538 aa20.77■□□□□ 0.92
NEIL1-223ENST00000569506 DBF4Q9UBU7 674 aaPredicted RBP20.77■□□□□ 0.92
NEIL1-223ENST00000569506 NOB1Q9ULX3 412 aaKnown RBP20.77■□□□□ 0.92
NEIL1-223ENST00000569506 USP16Q9Y5T5 823 aa20.77■□□□□ 0.92
NEIL1-223ENST00000569506 CACNA1FO60840 1977 aa20.76■□□□□ 0.91
NEIL1-223ENST00000569506 PLIN1O60240 522 aa20.76■□□□□ 0.91
NEIL1-223ENST00000569506 C5P01031 1676 aa20.76■□□□□ 0.91
NEIL1-223ENST00000569506 ERBB4Q15303 1308 aa20.76■□□□□ 0.91
NEIL1-223ENST00000569506 MS4A1P11836 297 aa20.75■□□□□ 0.91
NEIL1-223ENST00000569506 LAMB4A4D0S4 1761 aa20.74■□□□□ 0.91
NEIL1-223ENST00000569506 BTAF1O14981 1849 aa20.74■□□□□ 0.91
NEIL1-223ENST00000569506 LOC102724428A0A0B4J2F2 783 aa20.74■□□□□ 0.91
NEIL1-223ENST00000569506 STARD3NLO95772 234 aa20.74■□□□□ 0.91
NEIL1-223ENST00000569506 SIK1P57059 783 aa20.74■□□□□ 0.91
NEIL1-223ENST00000569506 ARXQ96QS3 562 aa20.74■□□□□ 0.91
NEIL1-223ENST00000569506 DDX21Q9NR30 783 aaKnown RBP eCLIP20.74■□□□□ 0.91
NEIL1-223ENST00000569506 CHPF2Q9P2E5 772 aa20.74■□□□□ 0.91
NEIL1-223ENST00000569506 PTPRCP08575 1304 aa20.74■□□□□ 0.91
NEIL1-223ENST00000569506 GOLGB1Q14789 3259 aaKnown RBP20.73■□□□□ 0.91
NEIL1-223ENST00000569506 PDE3AQ14432 1141 aa20.73■□□□□ 0.91
NEIL1-223ENST00000569506 ATF7IPQ6VMQ6 1270 aa20.73■□□□□ 0.91
NEIL1-223ENST00000569506 DNAJC10Q8IXB1 793 aa20.73■□□□□ 0.91
NEIL1-223ENST00000569506 SLC4A9Q96Q91 983 aa20.73■□□□□ 0.91
NEIL1-223ENST00000569506 API5Q9BZZ5 524 aaKnown RBP20.73■□□□□ 0.91
NEIL1-223ENST00000569506 HYPKQ9NX55 129 aa20.73■□□□□ 0.91
NEIL1-223ENST00000569506 ATP6V1AP38606 617 aa20.71■□□□□ 0.91
NEIL1-223ENST00000569506 PDIA6Q15084 440 aa20.71■□□□□ 0.91
NEIL1-223ENST00000569506 ZNF831Q5JPB2 1677 aa20.7■□□□□ 0.91
NEIL1-223ENST00000569506 FLIIQ13045 1269 aa20.7■□□□□ 0.9
NEIL1-223ENST00000569506 QSER1Q2KHR3 1735 aa20.7■□□□□ 0.9
NEIL1-223ENST00000569506 CICQ96RK0 1608 aaPredicted RBP20.69■□□□□ 0.9
NEIL1-223ENST00000569506 CYP19A1P11511 503 aaPredicted RBP20.69■□□□□ 0.9
NEIL1-223ENST00000569506 TRIM27P14373 513 aa20.69■□□□□ 0.9
NEIL1-223ENST00000569506 G2E3Q7L622 706 aa20.69■□□□□ 0.9
NEIL1-223ENST00000569506 FTSJ3Q8IY81 847 aaKnown RBP20.69■□□□□ 0.9
NEIL1-223ENST00000569506 DZIP1LQ8IYY4 767 aaKnown RBP20.69■□□□□ 0.9
NEIL1-223ENST00000569506 CEP350Q5VT06 3117 aa20.69■□□□□ 0.9
NEIL1-223ENST00000569506 TJP1Q07157 1748 aa20.67■□□□□ 0.9
NEIL1-223ENST00000569506 COL24A1Q17RW2 1714 aa20.67■□□□□ 0.9
NEIL1-223ENST00000569506 A1BGP04217 495 aa20.67■□□□□ 0.9
NEIL1-223ENST00000569506 IRX6P78412 446 aaPredicted RBP20.67■□□□□ 0.9
NEIL1-223ENST00000569506 FKBP8Q14318 412 aa20.67■□□□□ 0.9
NEIL1-223ENST00000569506 PROSER3Q2NL68 480 aa20.67■□□□□ 0.9
NEIL1-223ENST00000569506 C20orf194Q5TEA3 1177 aa20.67■□□□□ 0.9
NEIL1-223ENST00000569506 PHAXQ9H814 394 aaKnown RBP20.67■□□□□ 0.9
NEIL1-223ENST00000569506 ANXA1P04083 346 aa20.66■□□□□ 0.9
NEIL1-223ENST00000569506 MYL6BP14649 208 aa20.66■□□□□ 0.9
NEIL1-223ENST00000569506 FKBP5Q13451 457 aaPredicted RBP20.66■□□□□ 0.9
NEIL1-223ENST00000569506 ITPK1Q13572 414 aa20.66■□□□□ 0.9
NEIL1-223ENST00000569506 ERICH6BQ5W0A0 696 aa20.66■□□□□ 0.9
NEIL1-223ENST00000569506 CCNL1Q9UK58 526 aaPredicted RBP20.66■□□□□ 0.9
NEIL1-223ENST00000569506 NBPF26B4DH59 902 aa20.65■□□□□ 0.9
NEIL1-223ENST00000569506 HMGB2P26583 209 aaKnown RBP20.65■□□□□ 0.9
NEIL1-223ENST00000569506 GPR162Q16538 588 aa20.65■□□□□ 0.9
NEIL1-223ENST00000569506 ZNF827Q17R98 1081 aa20.65■□□□□ 0.9
NEIL1-223ENST00000569506 NBPF10Q6P3W6 841 aaKnown RBP20.65■□□□□ 0.9
NEIL1-223ENST00000569506 LRP10Q7Z4F1 713 aa20.65■□□□□ 0.9
NEIL1-223ENST00000569506 NBPF15Q8N660 670 aa20.65■□□□□ 0.9
NEIL1-223ENST00000569506 CLUAP1Q96AJ1 413 aa20.65■□□□□ 0.9
NEIL1-223ENST00000569506 LY75O60449 1722 aa20.64■□□□□ 0.9
NEIL1-223ENST00000569506 ABCC4O15439 1325 aa20.64■□□□□ 0.89
NEIL1-223ENST00000569506 DDX58O95786 925 aaKnown RBP20.64■□□□□ 0.89
NEIL1-223ENST00000569506 SLC27A3Q5K4L6 730 aa20.64■□□□□ 0.89
NEIL1-223ENST00000569506 PANK1Q8TE04 598 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms