RNA–Protein interactions for RNA: ENST00000569395.5

SCAPER-222, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 558 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-222	ENST00000569395	CDCA8	Q53HL2	280 aa		7.46	□□□□□ -1.22
SCAPER-222	ENST00000569395	LCE3B	Q5TA77	95 aa		7.46	□□□□□ -1.22
SCAPER-222	ENST00000569395	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	7.46	□□□□□ -1.22
SCAPER-222	ENST00000569395	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	7.45	□□□□□ -1.22
SCAPER-222	ENST00000569395	SUPT5H	O00267	1087 aa	Known RBP	7.45	□□□□□ -1.22
SCAPER-222	ENST00000569395	CDK2AP1	O14519	115 aa		7.45	□□□□□ -1.22
SCAPER-222	ENST00000569395	EPHA4	P54764	986 aa		7.45	□□□□□ -1.22
SCAPER-222	ENST00000569395	SEC13	P55735	322 aa		7.45	□□□□□ -1.22
SCAPER-222	ENST00000569395	SRPK2	P78362	688 aa	Known RBP	7.45	□□□□□ -1.22
SCAPER-222	ENST00000569395	DPYD	Q12882	1025 aa		7.45	□□□□□ -1.22
SCAPER-222	ENST00000569395	C4orf17	Q53FE4	359 aa		7.45	□□□□□ -1.22
SCAPER-222	ENST00000569395	ANKMY2	Q8IV38	441 aa		7.45	□□□□□ -1.22
SCAPER-222	ENST00000569395	TIMMDC1	Q9NPL8	285 aa		7.45	□□□□□ -1.22
SCAPER-222	ENST00000569395	SCHIP1	Q9P0W5	487 aa	Predicted RBP	7.45	□□□□□ -1.22
SCAPER-222	ENST00000569395	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	7.45	□□□□□ -1.22
SCAPER-222	ENST00000569395	DYRK1B	Q9Y463	629 aa		7.45	□□□□□ -1.22
SCAPER-222	ENST00000569395	ERCC6	Q03468	1493 aa		7.44	□□□□□ -1.22
SCAPER-222	ENST00000569395	SFI1	A8K8P3	1242 aa		7.44	□□□□□ -1.22
SCAPER-222	ENST00000569395	ADAM23	O75077	832 aa		7.44	□□□□□ -1.22
SCAPER-222	ENST00000569395	PHKA2	P46019	1235 aa		7.44	□□□□□ -1.22
SCAPER-222	ENST00000569395	TNS4	Q8IZW8	715 aa		7.44	□□□□□ -1.22
SCAPER-222	ENST00000569395	PBXIP1	Q96AQ6	731 aa		7.44	□□□□□ -1.22
SCAPER-222	ENST00000569395	NIFK	Q9BYG3	293 aa	Known RBP	7.44	□□□□□ -1.22
SCAPER-222	ENST00000569395	USP3	Q9Y6I4	520 aa		7.44	□□□□□ -1.22
SCAPER-222	ENST00000569395	SCRIB	Q14160	1630 aa		7.44	□□□□□ -1.22
SCAPER-222	ENST00000569395	ITGA6	P23229	1130 aa		7.43	□□□□□ -1.22
SCAPER-222	ENST00000569395	FOXK2	Q01167	660 aa		7.43	□□□□□ -1.22
SCAPER-222	ENST00000569395	SLC9A9	Q8IVB4	645 aa		7.43	□□□□□ -1.22
SCAPER-222	ENST00000569395	ZNF295-AS1	Q8N0V1	137 aa		7.43	□□□□□ -1.22
SCAPER-222	ENST00000569395	TSEN2	Q8NCE0	465 aa	Known RBP	7.43	□□□□□ -1.22
SCAPER-222	ENST00000569395	ARX	Q96QS3	562 aa		7.43	□□□□□ -1.22
SCAPER-222	ENST00000569395		A0A1B0GTH6	734 aa		7.42	□□□□□ -1.22
SCAPER-222	ENST00000569395	PLA2G4A	P47712	749 aa		7.42	□□□□□ -1.22
SCAPER-222	ENST00000569395	ELOA	Q14241	798 aa	Known RBP	7.42	□□□□□ -1.22
SCAPER-222	ENST00000569395	CABP1	Q9NZU7	370 aa		7.42	□□□□□ -1.22
SCAPER-222	ENST00000569395	NOVA2	Q9UNW9	492 aa	Known RBP	7.42	□□□□□ -1.22
SCAPER-222	ENST00000569395	ATG7	O95352	703 aa		7.41	□□□□□ -1.22
SCAPER-222	ENST00000569395	VSIG8	P0DPA2	414 aa		7.41	□□□□□ -1.22
SCAPER-222	ENST00000569395	FAM200A	Q8TCP9	573 aa		7.41	□□□□□ -1.22
SCAPER-222	ENST00000569395	NANOS1	Q8WY41	292 aa	Known RBP	7.41	□□□□□ -1.22
SCAPER-222	ENST00000569395	GAS2L1	Q99501	681 aa	Predicted RBP	7.41	□□□□□ -1.22
SCAPER-222	ENST00000569395	F11	P03951	625 aa		7.4	□□□□□ -1.22
SCAPER-222	ENST00000569395	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	7.4	□□□□□ -1.22
SCAPER-222	ENST00000569395	ADAMTS8	Q9UP79	889 aa		7.4	□□□□□ -1.22
SCAPER-222	ENST00000569395	CDC14C	A4D256	554 aa		7.39	□□□□□ -1.23
SCAPER-222	ENST00000569395		H7C1W4	665 aa		7.39	□□□□□ -1.23
SCAPER-222	ENST00000569395	PSMA6	P60900	246 aa	Known RBP	7.39	□□□□□ -1.23
SCAPER-222	ENST00000569395	TEAD4	Q15561	434 aa		7.39	□□□□□ -1.23
SCAPER-222	ENST00000569395	NBPF1	Q3BBV0	1214 aa		7.39	□□□□□ -1.23
SCAPER-222	ENST00000569395	TBCEL	Q5QJ74	424 aa		7.39	□□□□□ -1.23
SCAPER-222	ENST00000569395	RIPOR1	Q6ZS17	1223 aa		7.39	□□□□□ -1.23
SCAPER-222	ENST00000569395	GMCL1	Q96IK5	515 aa		7.39	□□□□□ -1.23
SCAPER-222	ENST00000569395	HINFP	Q9BQA5	517 aa		7.39	□□□□□ -1.23
SCAPER-222	ENST00000569395	GPAM	Q9HCL2	828 aa		7.39	□□□□□ -1.23
SCAPER-222	ENST00000569395	ZMIZ1	Q9ULJ6	1067 aa		7.39	□□□□□ -1.23
SCAPER-222	ENST00000569395	PPP1R15A	O75807	674 aa	Predicted RBP	7.38	□□□□□ -1.23
SCAPER-222	ENST00000569395	MSX1	P28360	303 aa		7.38	□□□□□ -1.23
SCAPER-222	ENST00000569395	TRIM22	Q8IYM9	498 aa		7.38	□□□□□ -1.23
SCAPER-222	ENST00000569395	VWA5B2	Q8N398	1253 aa		7.38	□□□□□ -1.23
SCAPER-222	ENST00000569395	C1orf216	Q8TAB5	229 aa		7.38	□□□□□ -1.23
SCAPER-222	ENST00000569395	ZDHHC1	Q8WTX9	485 aa		7.38	□□□□□ -1.23
SCAPER-222	ENST00000569395	AIDA	Q96BJ3	306 aa		7.38	□□□□□ -1.23
SCAPER-222	ENST00000569395	CUEDC1	Q9NWM3	386 aa	Predicted RBP	7.38	□□□□□ -1.23
SCAPER-222	ENST00000569395	ZDHHC3	Q9NYG2	299 aa		7.38	□□□□□ -1.23
SCAPER-222	ENST00000569395	CHMP3	Q9Y3E7	222 aa		7.38	□□□□□ -1.23
SCAPER-222	ENST00000569395	NCAPD3	P42695	1498 aa		7.37	□□□□□ -1.23
SCAPER-222	ENST00000569395	SERTM1	A2A2V5	107 aa		7.37	□□□□□ -1.23
SCAPER-222	ENST00000569395	C21orf2	O43822	256 aa		7.37	□□□□□ -1.23
SCAPER-222	ENST00000569395	NOS2	P35228	1153 aa		7.37	□□□□□ -1.23
SCAPER-222	ENST00000569395	DBN1	Q16643	649 aa		7.37	□□□□□ -1.23
SCAPER-222	ENST00000569395	SV2A	Q7L0J3	742 aa		7.37	□□□□□ -1.23
SCAPER-222	ENST00000569395	GAS2L2	Q8NHY3	880 aa		7.37	□□□□□ -1.23
SCAPER-222	ENST00000569395	STK32A	Q8WU08	396 aa		7.37	□□□□□ -1.23
SCAPER-222	ENST00000569395	SCG3	Q8WXD2	468 aa	Known RBP	7.37	□□□□□ -1.23
SCAPER-222	ENST00000569395	L3MBTL2	Q969R5	705 aa		7.37	□□□□□ -1.23
SCAPER-222	ENST00000569395	ZNF837	Q96EG3	531 aa	Predicted RBP	7.37	□□□□□ -1.23
SCAPER-222	ENST00000569395	ZNF232	Q9UNY5	417 aa		7.37	□□□□□ -1.23
SCAPER-222	ENST00000569395	PARP3	Q9Y6F1	533 aa		7.37	□□□□□ -1.23
SCAPER-222	ENST00000569395	ZCCHC6	Q5VYS8	1495 aa	Known RBP	7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	ATAD2	Q6PL18	1390 aa		7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	ACIN1	Q9UKV3	1341 aa	Known RBP	7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	EML1	O00423	815 aa		7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	PPP1R12B	O60237	982 aa	Predicted RBP	7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	CSB-PGBD3	P0DP91	1061 aa		7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	TAT	P17735	454 aa	Predicted RBP	7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	ATP4A	P20648	1035 aa		7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	LBR	Q14739	615 aa	Known RBP	7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	SWI5	Q1ZZU3	235 aa		7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	POTEA	Q6S8J7	498 aa		7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	PGBD3	Q8N328	593 aa		7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	ARID3A	Q99856	593 aa		7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	KRTAP9-9	Q9BYP9	154 aa		7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	KRTAP9-4	Q9BYQ2	154 aa		7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	NUCKS1	Q9H1E3	243 aa	Known RBP	7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	CRISPLD1	Q9H336	500 aa		7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	RUBCNL	Q9H714	662 aa		7.36	□□□□□ -1.23
SCAPER-222	ENST00000569395	LGR5	O75473	907 aa		7.35	□□□□□ -1.23
SCAPER-222	ENST00000569395	IGFBP4	P22692	258 aa		7.35	□□□□□ -1.23
SCAPER-222	ENST00000569395	TXLNA	P40222	546 aa		7.35	□□□□□ -1.23
SCAPER-222	ENST00000569395	HIRA	P54198	1017 aa	Predicted RBP	7.35	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms