RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 CARNS1A5YM72 827 aa11.66□□□□□ -0.54
CCDC113-205ENST00000569374 RGS22Q8NE09 1264 aa11.66□□□□□ -0.54
CCDC113-205ENST00000569374 MKRN1Q9UHC7 482 aaKnown RBP11.66□□□□□ -0.54
CCDC113-205ENST00000569374 ANKRD50Q9ULJ7 1429 aa11.66□□□□□ -0.54
CCDC113-205ENST00000569374 SLIT1O75093 1534 aa11.65□□□□□ -0.54
CCDC113-205ENST00000569374 KDM5AP29375 1690 aaKnown RBP11.65□□□□□ -0.54
CCDC113-205ENST00000569374 ADH1BP00325 375 aa11.65□□□□□ -0.54
CCDC113-205ENST00000569374 NOS1P29475 1434 aa11.64□□□□□ -0.55
CCDC113-205ENST00000569374 ZPR1O75312 459 aa11.64□□□□□ -0.55
CCDC113-205ENST00000569374 THSD4Q6ZMP0 1018 aa11.64□□□□□ -0.55
CCDC113-205ENST00000569374 PLPP7Q8NBV4 271 aa11.64□□□□□ -0.55
CCDC113-205ENST00000569374 FAM174AQ8TBP5 190 aa11.64□□□□□ -0.55
CCDC113-205ENST00000569374 ADAM32Q8TC27 787 aa11.64□□□□□ -0.55
CCDC113-205ENST00000569374 TMEM131LA2VDJ0 1609 aa11.64□□□□□ -0.55
CCDC113-205ENST00000569374 IQSEC2Q5JU85 1478 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 SCAF11Q99590 1463 aaKnown RBP11.63□□□□□ -0.55
CCDC113-205ENST00000569374 USP17L15C9J2P7 530 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 USP17L10C9JJH3 530 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 USP17L13C9JLJ4 530 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 USP17L12C9JPN9 530 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 USP17L11C9JVI0 530 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 USP17L21D6R901 530 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 USP17L18D6R9N7 530 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 USP17L22D6RA61 530 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 USP17L17D6RBQ6 530 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 USP17L19D6RCP7 530 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 USP17L20D6RJB6 530 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 RASA1P20936 1047 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 USP17L24Q0WX57 530 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 NCOA4Q13772 614 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 EML3Q32P44 896 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 TMEM164Q5U3C3 297 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 TRIM50Q86XT4 487 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 DZIP3Q86Y13 1208 aaKnown RBP11.63□□□□□ -0.55
CCDC113-205ENST00000569374 DEPDC4Q8N2C3 294 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 CCDC24Q8N4L8 307 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 CCER1Q8TC90 406 aaPredicted RBP11.63□□□□□ -0.55
CCDC113-205ENST00000569374 UNC93B1Q9H1C4 597 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 ZMIZ1Q9ULJ6 1067 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 MTMR7Q9Y216 660 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 GNEQ9Y223 722 aaKnown RBP11.63□□□□□ -0.55
CCDC113-205ENST00000569374 SPHKAPQ2M3C7 1700 aa11.63□□□□□ -0.55
CCDC113-205ENST00000569374 LTKP29376 864 aa11.62□□□□□ -0.55
CCDC113-205ENST00000569374 ITGAEP38570 1179 aa11.62□□□□□ -0.55
CCDC113-205ENST00000569374 CCDC27Q2M243 656 aa11.62□□□□□ -0.55
CCDC113-205ENST00000569374 SND1Q7KZF4 910 aaKnown RBP eCLIP11.62□□□□□ -0.55
CCDC113-205ENST00000569374 FAM200AQ8TCP9 573 aa11.62□□□□□ -0.55
CCDC113-205ENST00000569374 PRDM9Q9NQV7 894 aa11.62□□□□□ -0.55
CCDC113-205ENST00000569374 PHTF2Q8N3S3 785 aa11.61□□□□□ -0.55
CCDC113-205ENST00000569374 STK32AQ8WU08 396 aa11.61□□□□□ -0.55
CCDC113-205ENST00000569374 CPS1P31327 1500 aa11.6□□□□□ -0.55
CCDC113-205ENST00000569374 LRRC7Q96NW7 1537 aa11.6□□□□□ -0.55
CCDC113-205ENST00000569374 ATP1A2P50993 1020 aa11.6□□□□□ -0.55
CCDC113-205ENST00000569374 OCSTAMPQ9BR26 566 aa11.6□□□□□ -0.55
CCDC113-205ENST00000569374 CDCA7Q9BWT1 371 aaPredicted RBP11.6□□□□□ -0.55
CCDC113-205ENST00000569374 PTK7Q13308 1070 aa11.59□□□□□ -0.55
CCDC113-205ENST00000569374 CRTC2Q53ET0 693 aaPredicted RBP11.59□□□□□ -0.55
CCDC113-205ENST00000569374 RNF20Q5VTR2 975 aa11.59□□□□□ -0.55
CCDC113-205ENST00000569374 SH3BP5LQ7L8J4 393 aa11.59□□□□□ -0.55
CCDC113-205ENST00000569374 SLC6A16Q9GZN6 736 aa11.59□□□□□ -0.55
CCDC113-205ENST00000569374 NOD1Q9Y239 953 aa11.59□□□□□ -0.55
CCDC113-205ENST00000569374 RRBP1Q9P2E9 1410 aaKnown RBP11.59□□□□□ -0.55
CCDC113-205ENST00000569374 KANK1Q14678 1352 aa11.58□□□□□ -0.56
CCDC113-205ENST00000569374 CLTCL1P53675 1640 aa11.58□□□□□ -0.56
CCDC113-205ENST00000569374 BPHLQ86WA6 291 aaPredicted RBP11.58□□□□□ -0.56
CCDC113-205ENST00000569374 MTRQ99707 1265 aa11.58□□□□□ -0.56
CCDC113-205ENST00000569374 RBM19Q9Y4C8 960 aaKnown RBP11.58□□□□□ -0.56
CCDC113-205ENST00000569374 NRXN3Q9Y4C0 1643 aa11.57□□□□□ -0.56
CCDC113-205ENST00000569374 TMEM2Q9UHN6 1383 aa11.57□□□□□ -0.56
CCDC113-205ENST00000569374 TLL1O43897 1013 aa11.57□□□□□ -0.56
CCDC113-205ENST00000569374 IDI1Q13907 227 aa11.57□□□□□ -0.56
CCDC113-205ENST00000569374 AGERQ15109 404 aa11.57□□□□□ -0.56
CCDC113-205ENST00000569374 ANKMY2Q8IV38 441 aa11.57□□□□□ -0.56
CCDC113-205ENST00000569374 KCTD12Q96CX2 325 aaKnown RBP11.57□□□□□ -0.56
CCDC113-205ENST00000569374 IL21Q9HBE4 155 aa11.57□□□□□ -0.56
CCDC113-205ENST00000569374 NWD1Q149M9 1564 aa11.57□□□□□ -0.56
CCDC113-205ENST00000569374 ROCK1Q13464 1354 aa11.56□□□□□ -0.56
CCDC113-205ENST00000569374 MAGEB6P1A0A0J9YX57 407 aa11.56□□□□□ -0.56
CCDC113-205ENST00000569374 ZFYVE9O95405 1425 aa11.56□□□□□ -0.56
CCDC113-205ENST00000569374 ARID4AP29374 1257 aaPredicted RBP11.56□□□□□ -0.56
CCDC113-205ENST00000569374 SWI5Q1ZZU3 235 aa11.56□□□□□ -0.56
CCDC113-205ENST00000569374 ANKLE2Q86XL3 938 aa11.56□□□□□ -0.56
CCDC113-205ENST00000569374 CCDC125Q86Z20 511 aa11.56□□□□□ -0.56
CCDC113-205ENST00000569374 THEMISQ8N1K5 641 aaPredicted RBP11.56□□□□□ -0.56
CCDC113-205ENST00000569374 DOLKQ9UPQ8 538 aa11.56□□□□□ -0.56
CCDC113-205ENST00000569374 RPRD2Q5VT52 1461 aaKnown RBP11.56□□□□□ -0.56
CCDC113-205ENST00000569374 CHD2O14647 1828 aaKnown RBP11.56□□□□□ -0.56
CCDC113-205ENST00000569374 UBAP1LF5GYI3 381 aa11.55□□□□□ -0.56
CCDC113-205ENST00000569374 OGFOD1Q8N543 542 aa11.55□□□□□ -0.56
CCDC113-205ENST00000569374 CLP1Q92989 425 aaKnown RBP11.55□□□□□ -0.56
CCDC113-205ENST00000569374 SIRT1Q96EB6 747 aa11.55□□□□□ -0.56
CCDC113-205ENST00000569374 CARD14Q9BXL6 1004 aa11.55□□□□□ -0.56
CCDC113-205ENST00000569374 LARGE2Q8N3Y3 721 aa11.54□□□□□ -0.56
CCDC113-205ENST00000569374 DNAAF2Q9NVR5 837 aaKnown RBP11.54□□□□□ -0.56
CCDC113-205ENST00000569374 NBPF20Q3BBV1 942 aa11.53□□□□□ -0.56
CCDC113-205ENST00000569374 PTCRAQ6ISU1 281 aaPredicted RBP11.53□□□□□ -0.56
CCDC113-205ENST00000569374 TRAF7Q6Q0C0 670 aa11.53□□□□□ -0.56
CCDC113-205ENST00000569374 SH3RF1Q7Z6J0 888 aa11.53□□□□□ -0.56
CCDC113-205ENST00000569374 SLC10A4Q96EP9 437 aa11.53□□□□□ -0.56
CCDC113-205ENST00000569374 CDV3Q9UKY7 258 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms