RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 LBX1P52954 281 aa12.76□□□□□ -0.37
TCF4-243ENST00000569357 ABHD8Q96I13 439 aa12.76□□□□□ -0.37
TCF4-243ENST00000569357 SRP68Q9UHB9 627 aaKnown RBP12.76□□□□□ -0.37
TCF4-243ENST00000569357 ZC3H4Q9UPT8 1303 aaKnown RBP12.76□□□□□ -0.37
TCF4-243ENST00000569357 INSRP06213 1382 aa12.76□□□□□ -0.37
TCF4-243ENST00000569357 MAP2P11137 1827 aaKnown RBP12.76□□□□□ -0.37
TCF4-243ENST00000569357 PPM1GO15355 546 aaPredicted RBP12.75□□□□□ -0.37
TCF4-243ENST00000569357 DDR1Q08345 913 aa12.75□□□□□ -0.37
TCF4-243ENST00000569357 FKBP8Q14318 412 aa12.75□□□□□ -0.37
TCF4-243ENST00000569357 DPY19L2Q6NUT2 758 aa12.75□□□□□ -0.37
TCF4-243ENST00000569357 ZNF579Q8NAF0 562 aaKnown RBP12.75□□□□□ -0.37
TCF4-243ENST00000569357 SLC4A9Q96Q91 983 aa12.75□□□□□ -0.37
TCF4-243ENST00000569357 ARFGEF1Q9Y6D6 1849 aa12.75□□□□□ -0.37
TCF4-243ENST00000569357 BRCA1P38398 1863 aaKnown RBP12.74□□□□□ -0.37
TCF4-243ENST00000569357 PCNTO95613 3336 aa12.74□□□□□ -0.37
TCF4-243ENST00000569357 FLT4P35916 1363 aa12.74□□□□□ -0.37
TCF4-243ENST00000569357 MLLT1Q03111 559 aaPredicted RBP12.74□□□□□ -0.37
TCF4-243ENST00000569357 RC3H1Q5TC82 1133 aaKnown RBP12.74□□□□□ -0.37
TCF4-243ENST00000569357 IFNL2Q8IZJ0 200 aa12.74□□□□□ -0.37
TCF4-243ENST00000569357 CNTNAP4Q9C0A0 1308 aa12.73□□□□□ -0.37
TCF4-243ENST00000569357 CCDC85CA6NKD9 419 aa12.73□□□□□ -0.37
TCF4-243ENST00000569357 POTECB2RU33 542 aa12.73□□□□□ -0.37
TCF4-243ENST00000569357 FYB1O15117 783 aa12.73□□□□□ -0.37
TCF4-243ENST00000569357 PHKG2P15735 406 aa12.73□□□□□ -0.37
TCF4-243ENST00000569357 OTUD5Q96G74 571 aa12.73□□□□□ -0.37
TCF4-243ENST00000569357 GALR2O43603 387 aaPredicted RBP12.72□□□□□ -0.37
TCF4-243ENST00000569357 KDRP35968 1356 aa12.71□□□□□ -0.37
TCF4-243ENST00000569357 CNTNAP1P78357 1384 aa12.71□□□□□ -0.37
TCF4-243ENST00000569357 POTEB2H3BUK9 544 aa12.71□□□□□ -0.37
TCF4-243ENST00000569357 POTEJP0CG39 1038 aa12.71□□□□□ -0.37
TCF4-243ENST00000569357 VEGFBP49765 207 aa12.71□□□□□ -0.37
TCF4-243ENST00000569357 PUS7Q96PZ0 661 aaKnown RBP12.71□□□□□ -0.37
TCF4-243ENST00000569357 EMILIN1Q9Y6C2 1016 aa12.71□□□□□ -0.37
TCF4-243ENST00000569357 SBF1O95248 1867 aa12.7□□□□□ -0.38
TCF4-243ENST00000569357 USP42Q9H9J4 1324 aaKnown RBP12.7□□□□□ -0.38
TCF4-243ENST00000569357 POLRMTO00411 1230 aaKnown RBP12.7□□□□□ -0.38
TCF4-243ENST00000569357 PTCD1O75127 700 aaKnown RBP12.7□□□□□ -0.38
TCF4-243ENST00000569357 TTLL6Q8N841 843 aa12.7□□□□□ -0.38
TCF4-243ENST00000569357 CFAP44Q96MT7 982 aa12.7□□□□□ -0.38
TCF4-243ENST00000569357 KDM6AO15550 1401 aaPredicted RBP12.7□□□□□ -0.38
TCF4-243ENST00000569357 CRKLP46109 303 aaKnown RBP12.69□□□□□ -0.38
TCF4-243ENST00000569357 ERFEQ4G0M1 354 aa12.69□□□□□ -0.38
TCF4-243ENST00000569357 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.69□□□□□ -0.38
TCF4-243ENST00000569357 NFKBIEO00221 500 aa12.68□□□□□ -0.38
TCF4-243ENST00000569357 ZPR1O75312 459 aa12.68□□□□□ -0.38
TCF4-243ENST00000569357 CABP4P57796 275 aa12.68□□□□□ -0.38
TCF4-243ENST00000569357 C2CD5Q86YS7 1000 aa12.68□□□□□ -0.38
TCF4-243ENST00000569357 EYA1Q99502 592 aa12.68□□□□□ -0.38
TCF4-243ENST00000569357 WBP1LQ9NX94 342 aa12.68□□□□□ -0.38
TCF4-243ENST00000569357 ERVV-2B6SEH9 535 aa12.67□□□□□ -0.38
TCF4-243ENST00000569357 HSPA8P11142 646 aaKnown RBP12.67□□□□□ -0.38
TCF4-243ENST00000569357 TM4SF1P30408 202 aa12.67□□□□□ -0.38
TCF4-243ENST00000569357 TMEM88BA6NKF7 163 aa12.66□□□□□ -0.38
TCF4-243ENST00000569357 H0YIN7 160 aa12.66□□□□□ -0.38
TCF4-243ENST00000569357 DDNO94850 711 aaPredicted RBP12.66□□□□□ -0.38
TCF4-243ENST00000569357 USPL1Q5W0Q7 1092 aa12.66□□□□□ -0.38
TCF4-243ENST00000569357 KIF24Q5T7B8 1368 aa12.66□□□□□ -0.38
TCF4-243ENST00000569357 ST20-MTHFSA0A0A6YYL1 179 aa12.64□□□□□ -0.39
TCF4-243ENST00000569357 C21orf2O43822 256 aa12.64□□□□□ -0.39
TCF4-243ENST00000569357 SERPINB2P05120 415 aa12.64□□□□□ -0.39
TCF4-243ENST00000569357 NFIXQ14938 502 aa12.64□□□□□ -0.39
TCF4-243ENST00000569357 EAPPQ56P03 285 aaPredicted RBP12.64□□□□□ -0.39
TCF4-243ENST00000569357 ZNF622Q969S3 477 aaKnown RBP eCLIP12.64□□□□□ -0.392e-6■■■□□ 17.7
TCF4-243ENST00000569357 TIAM2Q8IVF5 1701 aa12.64□□□□□ -0.39
TCF4-243ENST00000569357 TONSLQ96HA7 1378 aa12.64□□□□□ -0.39
TCF4-243ENST00000569357 PASKQ96RG2 1323 aa12.63□□□□□ -0.39
TCF4-243ENST00000569357 HSP90AB1P08238 724 aaKnown RBP12.63□□□□□ -0.39
TCF4-243ENST00000569357 MAP2K1Q02750 393 aaPredicted RBP12.63□□□□□ -0.39
TCF4-243ENST00000569357 DEFB115Q30KQ5 88 aa12.63□□□□□ -0.39
TCF4-243ENST00000569357 LDHDQ86WU2 507 aa12.63□□□□□ -0.39
TCF4-243ENST00000569357 TESK2Q96S53 571 aa12.63□□□□□ -0.39
TCF4-243ENST00000569357 IQCA1LA6NCM1 817 aa12.62□□□□□ -0.39
TCF4-243ENST00000569357 RGS19P49795 217 aa12.62□□□□□ -0.39
TCF4-243ENST00000569357 GRM1Q13255 1194 aa12.62□□□□□ -0.39
TCF4-243ENST00000569357 INTS5Q6P9B9 1019 aaKnown RBP12.62□□□□□ -0.39
TCF4-243ENST00000569357 BICDL1Q6ZP65 573 aa12.62□□□□□ -0.39
TCF4-243ENST00000569357 PAXIP1Q6ZW49 1069 aaPredicted RBP12.62□□□□□ -0.39
TCF4-243ENST00000569357 BEGAINQ9BUH8 593 aa12.62□□□□□ -0.39
TCF4-243ENST00000569357 NCAPD2Q15021 1401 aa12.62□□□□□ -0.39
TCF4-243ENST00000569357 WASHC2AQ641Q2 1341 aa12.62□□□□□ -0.39
TCF4-243ENST00000569357 MTHFSP49914 203 aa12.61□□□□□ -0.39
TCF4-243ENST00000569357 ZNF530Q6P9A1 599 aaPredicted RBP12.61□□□□□ -0.39
TCF4-243ENST00000569357 NFATC2IPQ8NCF5 419 aa12.61□□□□□ -0.39
TCF4-243ENST00000569357 TAOK3Q9H2K8 898 aa12.61□□□□□ -0.39
TCF4-243ENST00000569357 ABT1Q9ULW3 272 aaKnown RBP12.61□□□□□ -0.39
TCF4-243ENST00000569357 COL5A3P25940 1745 aaPredicted RBP12.61□□□□□ -0.39
TCF4-243ENST00000569357 MYH14Q7Z406 1995 aaKnown RBP12.61□□□□□ -0.39
TCF4-243ENST00000569357 WDR33Q9C0J8 1336 aaKnown RBP12.61□□□□□ -0.39
TCF4-243ENST00000569357 POTEMA6NI47 508 aa12.6□□□□□ -0.39
TCF4-243ENST00000569357 ITGBL1O95965 494 aaPredicted RBP12.6□□□□□ -0.39
TCF4-243ENST00000569357 PLEKHO1Q53GL0 409 aaPredicted RBP12.6□□□□□ -0.39
TCF4-243ENST00000569357 DNAJC10Q8IXB1 793 aa12.6□□□□□ -0.39
TCF4-243ENST00000569357 TAF1DQ9H5J8 278 aaPredicted RBP12.6□□□□□ -0.39
TCF4-243ENST00000569357 CCDC88AQ3V6T2 1871 aa12.59□□□□□ -0.39
TCF4-243ENST00000569357 SLC24A1O60721 1099 aa12.59□□□□□ -0.39
TCF4-243ENST00000569357 CCDC24Q8N4L8 307 aa12.59□□□□□ -0.39
TCF4-243ENST00000569357 NARFQ9UHQ1 456 aa12.59□□□□□ -0.39
TCF4-243ENST00000569357 TSKSQ9UJT2 592 aa12.59□□□□□ -0.39
TCF4-243ENST00000569357 CARMIL3Q8ND23 1372 aa12.58□□□□□ -0.4
TCF4-243ENST00000569357 RASSF10A6NK89 507 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms