RNA–Protein interactions for RNA: ENST00000569251.5

SCAMP2-211, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 867 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-211ENST00000569251 ZNF790Q6PG37 636 aa17.26■□□□□ 0.35
SCAMP2-211ENST00000569251 TTC5Q8N0Z6 440 aa17.26■□□□□ 0.35
SCAMP2-211ENST00000569251 COL15A1P39059 1388 aa17.26■□□□□ 0.35
SCAMP2-211ENST00000569251 SBF1O95248 1867 aa17.25■□□□□ 0.35
SCAMP2-211ENST00000569251 ATP10DQ9P241 1426 aa17.25■□□□□ 0.35
SCAMP2-211ENST00000569251 ZPR1O75312 459 aa17.25■□□□□ 0.35
SCAMP2-211ENST00000569251 DPEP1P16444 411 aa17.25■□□□□ 0.35
SCAMP2-211ENST00000569251 TM4SF1P30408 202 aa17.25■□□□□ 0.35
SCAMP2-211ENST00000569251 C1QTNF8P60827 252 aa17.25■□□□□ 0.35
SCAMP2-211ENST00000569251 USPL1Q5W0Q7 1092 aa17.25■□□□□ 0.35
SCAMP2-211ENST00000569251 ZNF496Q96IT1 587 aaPredicted RBP17.25■□□□□ 0.35
SCAMP2-211ENST00000569251 NARFQ9UHQ1 456 aa17.25■□□□□ 0.35
SCAMP2-211ENST00000569251 FCHSD2O94868 740 aa17.24■□□□□ 0.35
SCAMP2-211ENST00000569251 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
SCAMP2-211ENST00000569251 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.35
SCAMP2-211ENST00000569251 HEG1Q9ULI3 1381 aa17.24■□□□□ 0.35
SCAMP2-211ENST00000569251 DLEC1Q9Y238 1755 aa17.23■□□□□ 0.35
SCAMP2-211ENST00000569251 POLRMTO00411 1230 aaKnown RBP17.23■□□□□ 0.35
SCAMP2-211ENST00000569251 GIGYF1O75420 1035 aaPredicted RBP17.23■□□□□ 0.35
SCAMP2-211ENST00000569251 KCNA3P22001 575 aa17.23■□□□□ 0.35
SCAMP2-211ENST00000569251 STARD3NLO95772 234 aa17.22■□□□□ 0.35
SCAMP2-211ENST00000569251 EIF5P55010 431 aaKnown RBP17.22■□□□□ 0.35
SCAMP2-211ENST00000569251 BCL2L12Q9HB09 334 aa17.22■□□□□ 0.35
SCAMP2-211ENST00000569251 BCS1LQ9Y276 419 aa17.22■□□□□ 0.35
SCAMP2-211ENST00000569251 SCN7AQ01118 1682 aa17.22■□□□□ 0.35
SCAMP2-211ENST00000569251 CCDC88AQ3V6T2 1871 aa17.21■□□□□ 0.35
SCAMP2-211ENST00000569251 CANXP27824 592 aaKnown RBP17.21■□□□□ 0.35
SCAMP2-211ENST00000569251 TEX13AQ9BXU3 409 aaPredicted RBP17.21■□□□□ 0.35
SCAMP2-211ENST00000569251 ANKRD31Q8N7Z5 1873 aa17.2■□□□□ 0.34
SCAMP2-211ENST00000569251 BTBD11A6QL63 1104 aa17.2■□□□□ 0.34
SCAMP2-211ENST00000569251 NFIXQ14938 502 aa17.2■□□□□ 0.34
SCAMP2-211ENST00000569251 FMNL2Q96PY5 1086 aa17.2■□□□□ 0.34
SCAMP2-211ENST00000569251 BCORQ6W2J9 1755 aa17.2■□□□□ 0.34
SCAMP2-211ENST00000569251 KCNQ3O43525 872 aa17.19■□□□□ 0.34
SCAMP2-211ENST00000569251 PIM2Q9P1W9 311 aa17.19■□□□□ 0.34
SCAMP2-211ENST00000569251 MCM10Q7L590 875 aa17.18■□□□□ 0.34
SCAMP2-211ENST00000569251 A0A087WZG4 1122 aa17.17■□□□□ 0.34
SCAMP2-211ENST00000569251 HTATSF1O43719 755 aaKnown RBP17.17■□□□□ 0.34
SCAMP2-211ENST00000569251 IL6STP40189 918 aaPredicted RBP17.17■□□□□ 0.34
SCAMP2-211ENST00000569251 RTF1Q92541 710 aaKnown RBP17.17■□□□□ 0.34
SCAMP2-211ENST00000569251 GPBP1L1Q9HC44 474 aaPredicted RBP17.17■□□□□ 0.34
SCAMP2-211ENST00000569251 KDM3BQ7LBC6 1761 aa17.16■□□□□ 0.34
SCAMP2-211ENST00000569251 CHRNA5P30532 468 aa17.16■□□□□ 0.34
SCAMP2-211ENST00000569251 ARHGAP27Q6ZUM4 889 aa17.16■□□□□ 0.34
SCAMP2-211ENST00000569251 LAMB4A4D0S4 1761 aa17.15■□□□□ 0.34
SCAMP2-211ENST00000569251 A1BGP04217 495 aa17.15■□□□□ 0.34
SCAMP2-211ENST00000569251 SERPINB2P05120 415 aa17.15■□□□□ 0.34
SCAMP2-211ENST00000569251 DCTN1Q14203 1278 aa17.15■□□□□ 0.34
SCAMP2-211ENST00000569251 DALRD3Q5D0E6 543 aaKnown RBP17.15■□□□□ 0.34
SCAMP2-211ENST00000569251 ZNF526Q8TF50 670 aaPredicted RBP17.15■□□□□ 0.34
SCAMP2-211ENST00000569251 CACNA1SQ13698 1873 aa17.14■□□□□ 0.33
SCAMP2-211ENST00000569251 SENP3-EIF4A1A0A087X0R7 540 aa17.14■□□□□ 0.33
SCAMP2-211ENST00000569251 TBC1D2BQ9UPU7 963 aa17.14■□□□□ 0.33
SCAMP2-211ENST00000569251 USP16Q9Y5T5 823 aa17.14■□□□□ 0.33
SCAMP2-211ENST00000569251 PLEKHF1Q96S99 279 aa17.13■□□□□ 0.33
SCAMP2-211ENST00000569251 ZNF330Q9Y3S2 320 aaPredicted RBP17.13■□□□□ 0.33
SCAMP2-211ENST00000569251 COL11A2P13942 1736 aaPredicted RBP17.13■□□□□ 0.33
SCAMP2-211ENST00000569251 PRAMEF22A3QJZ6 481 aa17.12■□□□□ 0.33
SCAMP2-211ENST00000569251 TBC1D9BQ66K14 1250 aa17.12■□□□□ 0.33
SCAMP2-211ENST00000569251 CARMIL3Q8ND23 1372 aa17.12■□□□□ 0.33
SCAMP2-211ENST00000569251 SNRPA1P09661 255 aaKnown RBP17.11■□□□□ 0.33
SCAMP2-211ENST00000569251 TAF7Q15545 349 aaPredicted RBP17.11■□□□□ 0.33
SCAMP2-211ENST00000569251 BICDL1Q6ZP65 573 aa17.11■□□□□ 0.33
SCAMP2-211ENST00000569251 NUP98P52948 1817 aa17.11■□□□□ 0.33
SCAMP2-211ENST00000569251 DICER1Q9UPY3 1922 aaKnown RBP17.11■□□□□ 0.33
SCAMP2-211ENST00000569251 CAMTA2O94983 1202 aa17.1■□□□□ 0.33
SCAMP2-211ENST00000569251 FER1L6Q2WGJ9 1857 aa17.1■□□□□ 0.33
SCAMP2-211ENST00000569251 NEFMP07197 916 aa17.09■□□□□ 0.33
SCAMP2-211ENST00000569251 PIP4K2AP48426 406 aaPredicted RBP17.09■□□□□ 0.33
SCAMP2-211ENST00000569251 NPM2Q86SE8 214 aaKnown RBP17.09■□□□□ 0.33
SCAMP2-211ENST00000569251 ARFGEF2Q9Y6D5 1785 aa17.09■□□□□ 0.33
SCAMP2-211ENST00000569251 KIF3CO14782 793 aa17.08■□□□□ 0.32
SCAMP2-211ENST00000569251 RALBP1Q15311 655 aa17.08■□□□□ 0.32
SCAMP2-211ENST00000569251 NFE2L2Q16236 605 aa17.08■□□□□ 0.32
SCAMP2-211ENST00000569251 C9orf131Q5VYM1 1079 aa17.08■□□□□ 0.32
SCAMP2-211ENST00000569251 DZIP3Q86Y13 1208 aaKnown RBP17.08■□□□□ 0.32
SCAMP2-211ENST00000569251 C2CD5Q86YS7 1000 aa17.08■□□□□ 0.32
SCAMP2-211ENST00000569251 MIS18AQ9NYP9 233 aa17.08■□□□□ 0.32
SCAMP2-211ENST00000569251 SLX4Q8IY92 1834 aa17.07■□□□□ 0.32
SCAMP2-211ENST00000569251 NBPF26B4DH59 902 aa17.07■□□□□ 0.32
SCAMP2-211ENST00000569251 H0YIN7 160 aa17.07■□□□□ 0.32
SCAMP2-211ENST00000569251 PRR5LQ6MZQ0 368 aa17.07■□□□□ 0.32
SCAMP2-211ENST00000569251 NBPF10Q6P3W6 841 aaKnown RBP17.07■□□□□ 0.32
SCAMP2-211ENST00000569251 NBPF15Q8N660 670 aa17.07■□□□□ 0.32
SCAMP2-211ENST00000569251 PNNQ9H307 717 aaKnown RBP17.07■□□□□ 0.32
SCAMP2-211ENST00000569251 TTLL6Q8N841 843 aa17.06■□□□□ 0.32
SCAMP2-211ENST00000569251 SETDB2Q96T68 719 aa17.06■□□□□ 0.32
SCAMP2-211ENST00000569251 BRIP1Q9BX63 1249 aa17.06■□□□□ 0.32
SCAMP2-211ENST00000569251 PCNTO95613 3336 aa17.06■□□□□ 0.32
SCAMP2-211ENST00000569251 DDX10Q13206 875 aaKnown RBP17.05■□□□□ 0.32
SCAMP2-211ENST00000569251 CLEC4GQ6UXB4 293 aa17.05■□□□□ 0.32
SCAMP2-211ENST00000569251 PNISRQ8TF01 805 aaKnown RBP17.05■□□□□ 0.32
SCAMP2-211ENST00000569251 PDZRN3Q9UPQ7 1066 aa17.05■□□□□ 0.32
SCAMP2-211ENST00000569251 TIAM2Q8IVF5 1701 aa17.04■□□□□ 0.32
SCAMP2-211ENST00000569251 TNRC6CQ9HCJ0 1690 aaKnown RBP17.04■□□□□ 0.32
SCAMP2-211ENST00000569251 MAPK8IP3Q9UPT6 1336 aa17.04■□□□□ 0.32
SCAMP2-211ENST00000569251 PDE6BP35913 854 aa17.04■□□□□ 0.32
SCAMP2-211ENST00000569251 CCDC24Q8N4L8 307 aa17.04■□□□□ 0.32
SCAMP2-211ENST00000569251 THUMPD2Q9BTF0 503 aaKnown RBP17.04■□□□□ 0.32
SCAMP2-211ENST00000569251 RNF181Q9P0P0 153 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms