RNA–Protein interactions for RNA: ENST00000568672.1

NAE1-219, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-219ENST00000568672 VSIG10Q8N0Z9 540 aa11.11□□□□□ -0.63
NAE1-219ENST00000568672 LRCH3Q96II8 777 aa11.11□□□□□ -0.63
NAE1-219ENST00000568672 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.11□□□□□ -0.63
NAE1-219ENST00000568672 RBM27Q9P2N5 1060 aaKnown RBP11.11□□□□□ -0.63
NAE1-219ENST00000568672 TRPC5Q9UL62 973 aaPredicted RBP11.11□□□□□ -0.63
NAE1-219ENST00000568672 EMILIN1Q9Y6C2 1016 aa11.11□□□□□ -0.63
NAE1-219ENST00000568672 AATKQ6ZMQ8 1374 aa11.11□□□□□ -0.63
NAE1-219ENST00000568672 LMO7Q8WWI1 1683 aa11.11□□□□□ -0.63
NAE1-219ENST00000568672 COL14A1Q05707 1796 aaKnown RBP11.11□□□□□ -0.63
NAE1-219ENST00000568672 KIF20BQ96Q89 1820 aa11.1□□□□□ -0.63
NAE1-219ENST00000568672 TESPA1A2RU30 521 aaPredicted RBP11.1□□□□□ -0.63
NAE1-219ENST00000568672 RXRBP28702 533 aa11.1□□□□□ -0.63
NAE1-219ENST00000568672 EVA1CP58658 441 aa11.1□□□□□ -0.63
NAE1-219ENST00000568672 VPS72Q15906 364 aa11.1□□□□□ -0.63
NAE1-219ENST00000568672 LTV1Q96GA3 475 aaPredicted RBP11.1□□□□□ -0.63
NAE1-219ENST00000568672 GJD4Q96KN9 370 aaPredicted RBP11.1□□□□□ -0.63
NAE1-219ENST00000568672 WBP1LQ9NX94 342 aa11.1□□□□□ -0.63
NAE1-219ENST00000568672 CCDC9Q9Y3X0 531 aaKnown RBP11.1□□□□□ -0.63
NAE1-219ENST00000568672 NRAPQ86VF7 1730 aa11.09□□□□□ -0.63
NAE1-219ENST00000568672 RBM26Q5T8P6 1007 aaKnown RBP11.09□□□□□ -0.63
NAE1-219ENST00000568672 SAMD7Q7Z3H4 446 aa11.09□□□□□ -0.63
NAE1-219ENST00000568672 MORC1Q86VD1 984 aa11.09□□□□□ -0.63
NAE1-219ENST00000568672 USP35Q9P2H5 1018 aa11.09□□□□□ -0.63
NAE1-219ENST00000568672 POLKQ9UBT6 870 aa11.09□□□□□ -0.63
NAE1-219ENST00000568672 HPS5Q9UPZ3 1129 aa11.09□□□□□ -0.63
NAE1-219ENST00000568672 GLI3P10071 1580 aa11.08□□□□□ -0.64
NAE1-219ENST00000568672 COL5A2P05997 1499 aaPredicted RBP11.08□□□□□ -0.64
NAE1-219ENST00000568672 PPM1GO15355 546 aaPredicted RBP11.08□□□□□ -0.64
NAE1-219ENST00000568672 HOXC9P31274 260 aa11.08□□□□□ -0.64
NAE1-219ENST00000568672 AMPHP49418 695 aa11.08□□□□□ -0.64
NAE1-219ENST00000568672 RBM6P78332 1123 aaKnown RBP11.08□□□□□ -0.64
NAE1-219ENST00000568672 PTGDRQ13258 359 aa11.08□□□□□ -0.64
NAE1-219ENST00000568672 HSP90AB2PQ58FF8 381 aa11.08□□□□□ -0.64
NAE1-219ENST00000568672 TTC13Q8NBP0 860 aa11.08□□□□□ -0.64
NAE1-219ENST00000568672 IP6K1Q92551 441 aa11.08□□□□□ -0.64
NAE1-219ENST00000568672 PEAK1Q9H792 1746 aa11.08□□□□□ -0.64
NAE1-219ENST00000568672 SPATA31A5Q5VU36 1347 aa11.08□□□□□ -0.64
NAE1-219ENST00000568672 SPATA31A7Q8IWB4 1347 aa11.08□□□□□ -0.64
NAE1-219ENST00000568672 ANKRD24Q8TF21 1146 aa11.07□□□□□ -0.64
NAE1-219ENST00000568672 RGPD5Q99666 1765 aa11.07□□□□□ -0.64
NAE1-219ENST00000568672 SPATA31A1Q5TZJ5 1347 aa11.07□□□□□ -0.64
NAE1-219ENST00000568672 RNF40O75150 1001 aa11.06□□□□□ -0.64
NAE1-219ENST00000568672 CSB-PGBD3P0DP91 1061 aa11.06□□□□□ -0.64
NAE1-219ENST00000568672 RGS12O14924 1447 aa11.06□□□□□ -0.64
NAE1-219ENST00000568672 NWD2Q9ULI1 1742 aa11.06□□□□□ -0.64
NAE1-219ENST00000568672 TOM1L2Q6ZVM7 507 aa11.05□□□□□ -0.64
NAE1-219ENST00000568672 LTN1O94822 1766 aa11.05□□□□□ -0.64
NAE1-219ENST00000568672 WDR17Q8IZU2 1322 aa11.05□□□□□ -0.64
NAE1-219ENST00000568672 NSD2O96028 1365 aa11.04□□□□□ -0.64
NAE1-219ENST00000568672 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.04□□□□□ -0.64
NAE1-219ENST00000568672 FAM161AQ3B820 660 aa11.04□□□□□ -0.64
NAE1-219ENST00000568672 SEPT12Q8IYM1 358 aa11.04□□□□□ -0.64
NAE1-219ENST00000568672 USHBP1Q8N6Y0 703 aa11.04□□□□□ -0.64
NAE1-219ENST00000568672 NLRP2Q9NX02 1062 aa11.04□□□□□ -0.64
NAE1-219ENST00000568672 TSR3Q9UJK0 312 aaKnown RBP11.04□□□□□ -0.64
NAE1-219ENST00000568672 ANKRD26Q9UPS8 1709 aa11.04□□□□□ -0.64
NAE1-219ENST00000568672 MTHFSP49914 203 aa11.03□□□□□ -0.64
NAE1-219ENST00000568672 FAM182BQ5T319 152 aa11.03□□□□□ -0.64
NAE1-219ENST00000568672 NBPF6Q5VWK0 638 aa11.03□□□□□ -0.64
NAE1-219ENST00000568672 TCP11L2Q8N4U5 519 aa11.03□□□□□ -0.64
NAE1-219ENST00000568672 NBPF4Q96M43 638 aa11.03□□□□□ -0.64
NAE1-219ENST00000568672 CRB1P82279 1406 aa11.02□□□□□ -0.64
NAE1-219ENST00000568672 FCHSD2O94868 740 aa11.02□□□□□ -0.65
NAE1-219ENST00000568672 SMYD5Q6GMV2 418 aa11.02□□□□□ -0.65
NAE1-219ENST00000568672 CARD10Q9BWT7 1032 aa11.02□□□□□ -0.65
NAE1-219ENST00000568672 INSRP06213 1382 aa11.02□□□□□ -0.65
NAE1-219ENST00000568672 NPC1L1Q9UHC9 1359 aa11.02□□□□□ -0.65
NAE1-219ENST00000568672 A0A0G2JS52 829 aa11.01□□□□□ -0.65
NAE1-219ENST00000568672 PPP2R1AP30153 589 aa11.01□□□□□ -0.65
NAE1-219ENST00000568672 PPP4CP60510 307 aa11.01□□□□□ -0.65
NAE1-219ENST00000568672 MYT1Q01538 1121 aa11.01□□□□□ -0.65
NAE1-219ENST00000568672 EIF4A2Q14240 407 aaKnown RBP11.01□□□□□ -0.65
NAE1-219ENST00000568672 FLT4P35916 1363 aa11.01□□□□□ -0.65
NAE1-219ENST00000568672 BLMP54132 1417 aaPredicted RBP11.01□□□□□ -0.65
NAE1-219ENST00000568672 MAP2P11137 1827 aaKnown RBP11□□□□□ -0.65
NAE1-219ENST00000568672 SWT1Q5T5J6 900 aaKnown RBP11□□□□□ -0.65
NAE1-219ENST00000568672 BARGINQ6ZT62 677 aa11□□□□□ -0.65
NAE1-219ENST00000568672 EYA1Q99502 592 aa11□□□□□ -0.65
NAE1-219ENST00000568672 RTL1A6NKG5 1358 aa11□□□□□ -0.65
NAE1-219ENST00000568672 RGPD2P0DJD1 1756 aa11□□□□□ -0.65
NAE1-219ENST00000568672 SMG6Q86US8 1419 aaKnown RBP10.99□□□□□ -0.65
NAE1-219ENST00000568672 CDK12Q9NYV4 1490 aaPredicted RBP10.99□□□□□ -0.65
NAE1-219ENST00000568672 ABCC6O95255 1503 aa10.99□□□□□ -0.65
NAE1-219ENST00000568672 IL13P35225 146 aa10.98□□□□□ -0.65
NAE1-219ENST00000568672 AEBP1Q8IUX7 1158 aa10.98□□□□□ -0.65
NAE1-219ENST00000568672 ADGRG1Q9Y653 693 aa10.98□□□□□ -0.65
NAE1-219ENST00000568672 DISP2A7MBM2 1401 aa10.98□□□□□ -0.65
NAE1-219ENST00000568672 THSD7AQ9UPZ6 1657 aa10.98□□□□□ -0.65
NAE1-219ENST00000568672 NYAP1Q6ZVC0 841 aa10.97□□□□□ -0.65
NAE1-219ENST00000568672 THRAP3Q9Y2W1 955 aaKnown RBP10.97□□□□□ -0.65
NAE1-219ENST00000568672 KIF24Q5T7B8 1368 aa10.97□□□□□ -0.65
NAE1-219ENST00000568672 PARD3Q8TEW0 1356 aa10.97□□□□□ -0.65
NAE1-219ENST00000568672 BRWD3Q6RI45 1802 aa10.96□□□□□ -0.65
NAE1-219ENST00000568672 FAM208AQ9UK61 1670 aaKnown RBP10.96□□□□□ -0.65
NAE1-219ENST00000568672 KRT27Q7Z3Y8 459 aa10.96□□□□□ -0.65
NAE1-219ENST00000568672 MARCH10Q8NA82 808 aaPredicted RBP10.96□□□□□ -0.65
NAE1-219ENST00000568672 MEGF6O75095 1541 aa10.95□□□□□ -0.66
NAE1-219ENST00000568672 COL3A1P02461 1466 aaPredicted RBP10.95□□□□□ -0.66
NAE1-219ENST00000568672 IL2RBP14784 551 aa10.95□□□□□ -0.66
NAE1-219ENST00000568672 FECHP22830 423 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms