RNA–Protein interactions for RNA: ENST00000568535.1

BBS4-214, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-214ENST00000568535 SCN11AQ9UI33 1791 aa10.37□□□□□ -0.75
BBS4-214ENST00000568535 TNS2Q63HR2 1409 aa10.37□□□□□ -0.75
BBS4-214ENST00000568535 SLC4A10Q6U841 1118 aa10.37□□□□□ -0.75
BBS4-214ENST00000568535 G2E3Q7L622 706 aa10.37□□□□□ -0.75
BBS4-214ENST00000568535 DDX21Q9NR30 783 aaKnown RBP eCLIP10.37□□□□□ -0.75
BBS4-214ENST00000568535 YY1P25490 414 aa10.36□□□□□ -0.75
BBS4-214ENST00000568535 LRP6O75581 1613 aa10.36□□□□□ -0.75
BBS4-214ENST00000568535 BCL9LQ86UU0 1499 aa10.36□□□□□ -0.75
BBS4-214ENST00000568535 ERBB4Q15303 1308 aa10.35□□□□□ -0.75
BBS4-214ENST00000568535 KDM2BQ8NHM5 1336 aa10.35□□□□□ -0.75
BBS4-214ENST00000568535 HDAC1Q13547 482 aaPredicted RBP10.35□□□□□ -0.75
BBS4-214ENST00000568535 VSIG10Q8N0Z9 540 aa10.35□□□□□ -0.75
BBS4-214ENST00000568535 HDAC5Q9UQL6 1122 aa10.35□□□□□ -0.75
BBS4-214ENST00000568535 NRAPQ86VF7 1730 aa10.35□□□□□ -0.75
BBS4-214ENST00000568535 SIPA1L3O60292 1781 aaPredicted RBP10.34□□□□□ -0.75
BBS4-214ENST00000568535 A0A0G2JS52 829 aa10.34□□□□□ -0.75
BBS4-214ENST00000568535 GNAI3P08754 354 aa10.34□□□□□ -0.75
BBS4-214ENST00000568535 MYT1Q01538 1121 aa10.34□□□□□ -0.75
BBS4-214ENST00000568535 FAM98CQ17RN3 349 aaKnown RBP10.34□□□□□ -0.75
BBS4-214ENST00000568535 KSR2Q6VAB6 950 aa10.34□□□□□ -0.75
BBS4-214ENST00000568535 PIGBQ92521 554 aa10.34□□□□□ -0.75
BBS4-214ENST00000568535 SYTL4Q96C24 671 aaPredicted RBP10.34□□□□□ -0.75
BBS4-214ENST00000568535 SRCIN1Q9C0H9 1055 aa10.34□□□□□ -0.75
BBS4-214ENST00000568535 PHAXQ9H814 394 aaKnown RBP10.34□□□□□ -0.75
BBS4-214ENST00000568535 FOXD4L1Q9NU39 408 aa10.34□□□□□ -0.75
BBS4-214ENST00000568535 TRPC5Q9UL62 973 aaPredicted RBP10.34□□□□□ -0.75
BBS4-214ENST00000568535 PCDHB15Q9Y5E8 787 aa10.34□□□□□ -0.75
BBS4-214ENST00000568535 RGS12O14924 1447 aa10.33□□□□□ -0.76
BBS4-214ENST00000568535 PI4KAP2A4QPH2 592 aa10.33□□□□□ -0.76
BBS4-214ENST00000568535 F6X3S4 739 aa10.33□□□□□ -0.76
BBS4-214ENST00000568535 PTCD1O75127 700 aaKnown RBP10.33□□□□□ -0.76
BBS4-214ENST00000568535 STARD3NLO95772 234 aa10.33□□□□□ -0.76
BBS4-214ENST00000568535 IGHDP01880 384 aa10.33□□□□□ -0.76
BBS4-214ENST00000568535 RPAP2Q8IXW5 612 aaPredicted RBP10.33□□□□□ -0.76
BBS4-214ENST00000568535 PI4KAP1Q8N8J0 262 aa10.33□□□□□ -0.76
BBS4-214ENST00000568535 DNAAF4Q8WXU2 420 aa10.33□□□□□ -0.76
BBS4-214ENST00000568535 AFF2P51816 1311 aa10.33□□□□□ -0.76
BBS4-214ENST00000568535 PXDNLA1KZ92 1463 aa10.32□□□□□ -0.76
BBS4-214ENST00000568535 PRAMEF22A3QJZ6 481 aa10.32□□□□□ -0.76
BBS4-214ENST00000568535 GNAI2P04899 355 aa10.32□□□□□ -0.76
BBS4-214ENST00000568535 PRIM1P49642 420 aaKnown RBP10.32□□□□□ -0.76
BBS4-214ENST00000568535 NEXNQ0ZGT2 675 aa10.32□□□□□ -0.76
BBS4-214ENST00000568535 RIC3Q7Z5B4 369 aa10.32□□□□□ -0.76
BBS4-214ENST00000568535 MARCH10Q8NA82 808 aaPredicted RBP10.32□□□□□ -0.76
BBS4-214ENST00000568535 GCC1Q96CN9 775 aa10.32□□□□□ -0.76
BBS4-214ENST00000568535 GJD4Q96KN9 370 aaPredicted RBP10.32□□□□□ -0.76
BBS4-214ENST00000568535 ATG3Q9NT62 314 aa10.32□□□□□ -0.76
BBS4-214ENST00000568535 USP16Q9Y5T5 823 aa10.32□□□□□ -0.76
BBS4-214ENST00000568535 BCL9O00512 1426 aa10.32□□□□□ -0.76
BBS4-214ENST00000568535 HMMRO75330 724 aa10.31□□□□□ -0.76
BBS4-214ENST00000568535 ALDH1L1O75891 902 aa10.31□□□□□ -0.76
BBS4-214ENST00000568535 MYL6BP14649 208 aa10.31□□□□□ -0.76
BBS4-214ENST00000568535 PDIA6Q15084 440 aa10.31□□□□□ -0.76
BBS4-214ENST00000568535 SMARCC1Q92922 1105 aaPredicted RBP10.31□□□□□ -0.76
BBS4-214ENST00000568535 RBM42Q9BTD8 480 aaKnown RBP10.31□□□□□ -0.76
BBS4-214ENST00000568535 ASAP1Q9ULH1 1129 aa10.31□□□□□ -0.76
BBS4-214ENST00000568535 CACNA1FO60840 1977 aa10.31□□□□□ -0.76
BBS4-214ENST00000568535 VIRMAQ69YN4 1812 aaKnown RBP10.3□□□□□ -0.76
BBS4-214ENST00000568535 SHANK3Q9BYB0 1731 aa10.3□□□□□ -0.76
BBS4-214ENST00000568535 ANXA1P04083 346 aa10.3□□□□□ -0.76
BBS4-214ENST00000568535 AIMP1Q12904 312 aaKnown RBP10.3□□□□□ -0.76
BBS4-214ENST00000568535 ANKRD13DQ6ZTN6 518 aa10.3□□□□□ -0.76
BBS4-214ENST00000568535 COPS6Q7L5N1 327 aa10.3□□□□□ -0.76
BBS4-214ENST00000568535 NPM2Q86SE8 214 aaKnown RBP10.3□□□□□ -0.76
BBS4-214ENST00000568535 ZBTB47Q9UFB7 747 aaPredicted RBP10.3□□□□□ -0.76
BBS4-214ENST00000568535 MAP3K2Q9Y2U5 619 aa10.3□□□□□ -0.76
BBS4-214ENST00000568535 ATP10DQ9P241 1426 aa10.3□□□□□ -0.76
BBS4-214ENST00000568535 ONECUT3O60422 494 aaPredicted RBP10.29□□□□□ -0.76
BBS4-214ENST00000568535 UBTFL1P0CB47 393 aaPredicted RBP10.29□□□□□ -0.76
BBS4-214ENST00000568535 PROSER3Q2NL68 480 aa10.29□□□□□ -0.76
BBS4-214ENST00000568535 BEND3Q5T5X7 828 aa10.29□□□□□ -0.76
BBS4-214ENST00000568535 ANKRD44Q8N8A2 993 aa10.29□□□□□ -0.76
BBS4-214ENST00000568535 LINS1Q8NG48 757 aa10.29□□□□□ -0.76
BBS4-214ENST00000568535 XAGE3Q8WTP9 111 aa10.29□□□□□ -0.76
BBS4-214ENST00000568535 MEIS3Q99687 375 aa10.29□□□□□ -0.76
BBS4-214ENST00000568535 QTRT2Q9H974 415 aaKnown RBP10.29□□□□□ -0.76
BBS4-214ENST00000568535 LRP5O75197 1615 aa10.29□□□□□ -0.76
BBS4-214ENST00000568535 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.28□□□□□ -0.76
BBS4-214ENST00000568535 RBM6P78332 1123 aaKnown RBP10.28□□□□□ -0.76
BBS4-214ENST00000568535 SMC5Q8IY18 1101 aa10.28□□□□□ -0.76
BBS4-214ENST00000568535 PLBD2Q8NHP8 589 aa10.28□□□□□ -0.76
BBS4-214ENST00000568535 ACSBG1Q96GR2 724 aa10.28□□□□□ -0.76
BBS4-214ENST00000568535 METTL22Q9BUU2 404 aaPredicted RBP10.28□□□□□ -0.76
BBS4-214ENST00000568535 C1orf115Q9H7X2 142 aa10.28□□□□□ -0.76
BBS4-214ENST00000568535 C9orf78Q9NZ63 289 aaPredicted RBP10.28□□□□□ -0.76
BBS4-214ENST00000568535 WNK3Q9BYP7 1800 aa10.28□□□□□ -0.76
BBS4-214ENST00000568535 KCPQ6ZWJ8 1503 aa10.28□□□□□ -0.76
BBS4-214ENST00000568535 ADCY9O60503 1353 aa10.27□□□□□ -0.76
BBS4-214ENST00000568535 IBTKQ9P2D0 1353 aaPredicted RBP10.27□□□□□ -0.76
BBS4-214ENST00000568535 ATRNO75882 1429 aa10.27□□□□□ -0.77
BBS4-214ENST00000568535 A1BGP04217 495 aa10.27□□□□□ -0.77
BBS4-214ENST00000568535 CEP85Q6P2H3 762 aa10.27□□□□□ -0.77
BBS4-214ENST00000568535 USP44Q9H0E7 712 aa10.27□□□□□ -0.77
BBS4-214ENST00000568535 RNF39Q9H2S5 420 aa10.27□□□□□ -0.77
BBS4-214ENST00000568535 U3KPZ7 1027 aaPredicted RBP10.27□□□□□ -0.77
BBS4-214ENST00000568535 PAPPAQ13219 1627 aa10.26□□□□□ -0.77
BBS4-214ENST00000568535 HMGB2P26583 209 aaKnown RBP10.26□□□□□ -0.77
BBS4-214ENST00000568535 ATP8B2P98198 1209 aa10.26□□□□□ -0.77
BBS4-214ENST00000568535 KIF6Q6ZMV9 814 aa10.26□□□□□ -0.77
BBS4-214ENST00000568535 LRP10Q7Z4F1 713 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms