RNA–Protein interactions for RNA: ENST00000568406.1

C1orf228-220, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 2

Gene C1orf228, Length 726 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-220ENST00000568406 KCPQ6ZWJ8 1503 aa20.46■□□□□ 0.87
C1orf228-220ENST00000568406 GNAT3A8MTJ3 354 aa20.45■□□□□ 0.86
C1orf228-220ENST00000568406 NFIXQ14938 502 aa20.45■□□□□ 0.86
C1orf228-220ENST00000568406 COL15A1P39059 1388 aa20.45■□□□□ 0.86
C1orf228-220ENST00000568406 STARD3NLO95772 234 aa20.44■□□□□ 0.86
C1orf228-220ENST00000568406 CANXP27824 592 aaKnown RBP20.44■□□□□ 0.86
C1orf228-220ENST00000568406 C9orf131Q5VYM1 1079 aa20.44■□□□□ 0.86
C1orf228-220ENST00000568406 IL17REQ8NFR9 667 aa20.44■□□□□ 0.86
C1orf228-220ENST00000568406 GAS2L2Q8NHY3 880 aa20.44■□□□□ 0.86
C1orf228-220ENST00000568406 COL3A1P02461 1466 aaPredicted RBP20.43■□□□□ 0.86
C1orf228-220ENST00000568406 TEFQ10587 303 aa20.43■□□□□ 0.86
C1orf228-220ENST00000568406 BCL2L12Q9HB09 334 aa20.43■□□□□ 0.86
C1orf228-220ENST00000568406 ADAMTS7Q9UKP4 1686 aa20.42■□□□□ 0.86
C1orf228-220ENST00000568406 ZNF496Q96IT1 587 aaPredicted RBP20.42■□□□□ 0.86
C1orf228-220ENST00000568406 SERPINB2P05120 415 aa20.41■□□□□ 0.86
C1orf228-220ENST00000568406 ZNF790Q6PG37 636 aa20.41■□□□□ 0.86
C1orf228-220ENST00000568406 A0A087WZG4 1122 aa20.4■□□□□ 0.86
C1orf228-220ENST00000568406 TOMM70O94826 608 aa20.4■□□□□ 0.86
C1orf228-220ENST00000568406 EIF5P55010 431 aaKnown RBP20.4■□□□□ 0.86
C1orf228-220ENST00000568406 CFAP53Q96M91 514 aa20.4■□□□□ 0.86
C1orf228-220ENST00000568406 TEX13AQ9BXU3 409 aaPredicted RBP20.4■□□□□ 0.86
C1orf228-220ENST00000568406 NMRK2Q9NPI5 230 aa20.4■□□□□ 0.86
C1orf228-220ENST00000568406 PHACTR3Q96KR7 559 aa20.39■□□□□ 0.85
C1orf228-220ENST00000568406 PRKAR2BP31323 418 aa20.38■□□□□ 0.85
C1orf228-220ENST00000568406 BICDL1Q6ZP65 573 aa20.38■□□□□ 0.85
C1orf228-220ENST00000568406 RNF181Q9P0P0 153 aa20.38■□□□□ 0.85
C1orf228-220ENST00000568406 BRCA1P38398 1863 aaKnown RBP20.37■□□□□ 0.85
C1orf228-220ENST00000568406 HEG1Q9ULI3 1381 aa20.37■□□□□ 0.85
C1orf228-220ENST00000568406 FMNL2Q96PY5 1086 aa20.36■□□□□ 0.85
C1orf228-220ENST00000568406 RSPH6AQ9H0K4 717 aa20.36■□□□□ 0.85
C1orf228-220ENST00000568406 NUDCQ9Y266 331 aa20.36■□□□□ 0.85
C1orf228-220ENST00000568406 C2CD5Q86YS7 1000 aa20.35■□□□□ 0.85
C1orf228-220ENST00000568406 TBC1D2BQ9UPU7 963 aa20.35■□□□□ 0.85
C1orf228-220ENST00000568406 ZNF330Q9Y3S2 320 aaPredicted RBP20.35■□□□□ 0.85
C1orf228-220ENST00000568406 CEMIPQ8WUJ3 1361 aa20.34■□□□□ 0.85
C1orf228-220ENST00000568406 KDM2BQ8NHM5 1336 aa20.34■□□□□ 0.85
C1orf228-220ENST00000568406 BTBD11A6QL63 1104 aa20.34■□□□□ 0.85
C1orf228-220ENST00000568406 H0YIN7 160 aa20.34■□□□□ 0.85
C1orf228-220ENST00000568406 TTLL6Q8N841 843 aa20.34■□□□□ 0.85
C1orf228-220ENST00000568406 ARFGEF1Q9Y6D6 1849 aa20.33■□□□□ 0.85
C1orf228-220ENST00000568406 KCNQ3O43525 872 aa20.33■□□□□ 0.85
C1orf228-220ENST00000568406 A1BGP04217 495 aa20.33■□□□□ 0.85
C1orf228-220ENST00000568406 U2AF1L5P0DN76 240 aaPredicted RBP20.33■□□□□ 0.85
C1orf228-220ENST00000568406 IL6STP40189 918 aaPredicted RBP20.33■□□□□ 0.85
C1orf228-220ENST00000568406 APLP1P51693 650 aa20.33■□□□□ 0.85
C1orf228-220ENST00000568406 U2AF1Q01081 240 aaKnown RBP eCLIP20.33■□□□□ 0.85
C1orf228-220ENST00000568406 TBC1D9BQ66K14 1250 aa20.33■□□□□ 0.85
C1orf228-220ENST00000568406 UBR2Q8IWV8 1755 aa20.33■□□□□ 0.84
C1orf228-220ENST00000568406 PPP2R1AP30153 589 aa20.32■□□□□ 0.84
C1orf228-220ENST00000568406 NPM2Q86SE8 214 aaKnown RBP20.32■□□□□ 0.84
C1orf228-220ENST00000568406 C16orf71Q8IYS4 520 aaPredicted RBP20.32■□□□□ 0.84
C1orf228-220ENST00000568406 RASSF7Q02833 373 aa20.31■□□□□ 0.84
C1orf228-220ENST00000568406 RBM46Q8TBY0 533 aaKnown RBP20.31■□□□□ 0.84
C1orf228-220ENST00000568406 RRAGCQ9HB90 399 aa20.31■□□□□ 0.84
C1orf228-220ENST00000568406 VIRMAQ69YN4 1812 aaKnown RBP20.31■□□□□ 0.84
C1orf228-220ENST00000568406 CARMIL3Q8ND23 1372 aa20.31■□□□□ 0.84
C1orf228-220ENST00000568406 RTF1Q92541 710 aaKnown RBP20.3■□□□□ 0.84
C1orf228-220ENST00000568406 LMNB1P20700 586 aa20.29■□□□□ 0.84
C1orf228-220ENST00000568406 BRIP1Q9BX63 1249 aa20.29■□□□□ 0.84
C1orf228-220ENST00000568406 NRXN2Q9P2S2 1712 aa20.29■□□□□ 0.84
C1orf228-220ENST00000568406 CAMTA2O94983 1202 aa20.28■□□□□ 0.84
C1orf228-220ENST00000568406 PDE6BP35913 854 aa20.28■□□□□ 0.84
C1orf228-220ENST00000568406 PRR5LQ6MZQ0 368 aa20.28■□□□□ 0.84
C1orf228-220ENST00000568406 MCM10Q7L590 875 aa20.28■□□□□ 0.84
C1orf228-220ENST00000568406 CCDC24Q8N4L8 307 aa20.28■□□□□ 0.84
C1orf228-220ENST00000568406 ZNF622Q969S3 477 aaKnown RBP eCLIP20.28■□□□□ 0.84
C1orf228-220ENST00000568406 SETDB2Q96T68 719 aa20.28■□□□□ 0.84
C1orf228-220ENST00000568406 USP16Q9Y5T5 823 aa20.28■□□□□ 0.84
C1orf228-220ENST00000568406 AFDNP55196 1824 aaKnown RBP20.27■□□□□ 0.84
C1orf228-220ENST00000568406 PRELPP51888 382 aa20.27■□□□□ 0.84
C1orf228-220ENST00000568406 PDZRN3Q9UPQ7 1066 aa20.27■□□□□ 0.84
C1orf228-220ENST00000568406 ZC3H4Q9UPT8 1303 aaKnown RBP20.27■□□□□ 0.83
C1orf228-220ENST00000568406 FSTL1Q12841 308 aa20.26■□□□□ 0.83
C1orf228-220ENST00000568406 DZIP3Q86Y13 1208 aaKnown RBP20.26■□□□□ 0.83
C1orf228-220ENST00000568406 DNAJC5GQ8N7S2 189 aa20.26■□□□□ 0.83
C1orf228-220ENST00000568406 PRAMEF22A3QJZ6 481 aa20.25■□□□□ 0.83
C1orf228-220ENST00000568406 HTATSF1O43719 755 aaKnown RBP20.25■□□□□ 0.83
C1orf228-220ENST00000568406 SNRPA1P09661 255 aaKnown RBP20.25■□□□□ 0.83
C1orf228-220ENST00000568406 PIP4K2AP48426 406 aaPredicted RBP20.25■□□□□ 0.83
C1orf228-220ENST00000568406 SIPA1L3O60292 1781 aaPredicted RBP20.24■□□□□ 0.83
C1orf228-220ENST00000568406 NFKBIEO00221 500 aa20.24■□□□□ 0.83
C1orf228-220ENST00000568406 NPHP1O15259 732 aa20.24■□□□□ 0.83
C1orf228-220ENST00000568406 DCTN1Q14203 1278 aa20.24■□□□□ 0.83
C1orf228-220ENST00000568406 IFFO2Q5TF58 517 aa20.24■□□□□ 0.83
C1orf228-220ENST00000568406 CNBD1Q8NA66 436 aa20.24■□□□□ 0.83
C1orf228-220ENST00000568406 GLTPD2A6NH11 291 aa20.23■□□□□ 0.83
C1orf228-220ENST00000568406 C21orf2O43822 256 aa20.23■□□□□ 0.83
C1orf228-220ENST00000568406 ZNF219Q9P2Y4 722 aaPredicted RBP20.23■□□□□ 0.83
C1orf228-220ENST00000568406 ST5P78524 1137 aa20.22■□□□□ 0.83
C1orf228-220ENST00000568406 TAF7Q15545 349 aaPredicted RBP20.21■□□□□ 0.83
C1orf228-220ENST00000568406 CLEC4GQ6UXB4 293 aa20.21■□□□□ 0.83
C1orf228-220ENST00000568406 SBF1O95248 1867 aa20.2■□□□□ 0.82
C1orf228-220ENST00000568406 VEGFAP15692 232 aaPredicted RBP20.2■□□□□ 0.82
C1orf228-220ENST00000568406 SMC1BQ8NDV3 1235 aa20.2■□□□□ 0.82
C1orf228-220ENST00000568406 SCN7AQ01118 1682 aa20.19■□□□□ 0.82
C1orf228-220ENST00000568406 DLEC1Q9Y238 1755 aa20.19■□□□□ 0.82
C1orf228-220ENST00000568406 NBPF26B4DH59 902 aa20.19■□□□□ 0.82
C1orf228-220ENST00000568406 SRGNP10124 158 aa20.19■□□□□ 0.82
C1orf228-220ENST00000568406 HTRA3P83110 453 aa20.19■□□□□ 0.82
C1orf228-220ENST00000568406 STYK1Q6J9G0 422 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms