RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 PRAMEF22A3QJZ6 481 aa10.82□□□□□ -0.68
HDGFL3-206ENST00000568294 CCDC8Q9H0W5 538 aaPredicted RBP10.82□□□□□ -0.68
HDGFL3-206ENST00000568294 ATP7BP35670 1465 aa10.82□□□□□ -0.68
HDGFL3-206ENST00000568294 LARGE1O95461 756 aa10.82□□□□□ -0.68
HDGFL3-206ENST00000568294 AK2P54819 239 aa10.82□□□□□ -0.68
HDGFL3-206ENST00000568294 ATP8B2P98198 1209 aa10.82□□□□□ -0.68
HDGFL3-206ENST00000568294 TEFQ10587 303 aa10.82□□□□□ -0.68
HDGFL3-206ENST00000568294 CWF19L2Q2TBE0 894 aaKnown RBP10.82□□□□□ -0.68
HDGFL3-206ENST00000568294 RHPN1Q8TCX5 695 aa10.82□□□□□ -0.68
HDGFL3-206ENST00000568294 PPP1R9BQ96SB3 815 aa10.82□□□□□ -0.68
HDGFL3-206ENST00000568294 TMEM131LA2VDJ0 1609 aa10.81□□□□□ -0.68
HDGFL3-206ENST00000568294 CPSF1Q10570 1443 aaKnown RBP10.81□□□□□ -0.68
HDGFL3-206ENST00000568294 CEBPZQ03701 1054 aaKnown RBP10.81□□□□□ -0.68
HDGFL3-206ENST00000568294 EID1Q9Y6B2 187 aa10.81□□□□□ -0.68
HDGFL3-206ENST00000568294 ARHGAP31Q2M1Z3 1444 aa10.81□□□□□ -0.68
HDGFL3-206ENST00000568294 KNDC1Q76NI1 1749 aa10.81□□□□□ -0.68
HDGFL3-206ENST00000568294 RRP9O43818 475 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-206ENST00000568294 MBD3O95983 291 aa10.8□□□□□ -0.68
HDGFL3-206ENST00000568294 NEO1Q92859 1461 aa10.8□□□□□ -0.68
HDGFL3-206ENST00000568294 BRD1O95696 1058 aa10.8□□□□□ -0.68
HDGFL3-206ENST00000568294 IFIT2P09913 472 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-206ENST00000568294 MYL6BP14649 208 aa10.8□□□□□ -0.68
HDGFL3-206ENST00000568294 DNM1Q05193 864 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-206ENST00000568294 SYAP1Q96A49 352 aaPredicted RBP10.8□□□□□ -0.68
HDGFL3-206ENST00000568294 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.8□□□□□ -0.68
HDGFL3-206ENST00000568294 ADCK5Q3MIX3 580 aa10.79□□□□□ -0.68
HDGFL3-206ENST00000568294 AACSQ86V21 672 aa10.79□□□□□ -0.68
HDGFL3-206ENST00000568294 EDC3Q96F86 508 aaKnown RBP10.79□□□□□ -0.68
HDGFL3-206ENST00000568294 BOLA2Q9H3K6 86 aa10.79□□□□□ -0.68
HDGFL3-206ENST00000568294 AATKQ6ZMQ8 1374 aa10.79□□□□□ -0.68
HDGFL3-206ENST00000568294 OFD1O75665 1012 aa10.79□□□□□ -0.68
HDGFL3-206ENST00000568294 COL9A3Q14050 684 aaPredicted RBP10.79□□□□□ -0.68
HDGFL3-206ENST00000568294 TPM2P07951 284 aa10.79□□□□□ -0.68
HDGFL3-206ENST00000568294 PTH1RQ03431 593 aa10.79□□□□□ -0.68
HDGFL3-206ENST00000568294 ZNF530Q6P9A1 599 aaPredicted RBP10.79□□□□□ -0.68
HDGFL3-206ENST00000568294 CKAP2LQ8IYA6 745 aa10.79□□□□□ -0.68
HDGFL3-206ENST00000568294 CNTROBQ8N137 903 aa10.79□□□□□ -0.68
HDGFL3-206ENST00000568294 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.79□□□□□ -0.68
HDGFL3-206ENST00000568294 TFIP11Q9UBB9 837 aaKnown RBP10.79□□□□□ -0.68
HDGFL3-206ENST00000568294 ZKSCAN5Q9Y2L8 839 aa10.79□□□□□ -0.68
HDGFL3-206ENST00000568294 SNX14Q9Y5W7 946 aa10.79□□□□□ -0.68
HDGFL3-206ENST00000568294 GJB2P29033 226 aa10.78□□□□□ -0.68
HDGFL3-206ENST00000568294 PROSER3Q2NL68 480 aa10.78□□□□□ -0.68
HDGFL3-206ENST00000568294 CCDC39Q9UFE4 941 aa10.78□□□□□ -0.68
HDGFL3-206ENST00000568294 PREX1Q8TCU6 1659 aa10.78□□□□□ -0.68
HDGFL3-206ENST00000568294 WDR33Q9C0J8 1336 aaKnown RBP10.78□□□□□ -0.68
HDGFL3-206ENST00000568294 ADCY5O95622 1261 aa10.78□□□□□ -0.68
HDGFL3-206ENST00000568294 SYT1P21579 422 aa10.78□□□□□ -0.68
HDGFL3-206ENST00000568294 HOXC9P31274 260 aa10.78□□□□□ -0.68
HDGFL3-206ENST00000568294 DRC7Q8IY82 874 aa10.78□□□□□ -0.68
HDGFL3-206ENST00000568294 CRB1P82279 1406 aa10.78□□□□□ -0.68
HDGFL3-206ENST00000568294 BTBD11A6QL63 1104 aa10.77□□□□□ -0.68
HDGFL3-206ENST00000568294 HOMEZQ8IX15 550 aa10.77□□□□□ -0.68
HDGFL3-206ENST00000568294 PKNOX2Q96KN3 472 aa10.77□□□□□ -0.68
HDGFL3-206ENST00000568294 FAM227BQ96M60 508 aa10.77□□□□□ -0.68
HDGFL3-206ENST00000568294 LRRC2Q9BYS8 371 aa10.77□□□□□ -0.68
HDGFL3-206ENST00000568294 KIF20BQ96Q89 1820 aa10.77□□□□□ -0.68
HDGFL3-206ENST00000568294 STX6O43752 255 aa10.77□□□□□ -0.69
HDGFL3-206ENST00000568294 CHGBP05060 677 aa10.77□□□□□ -0.69
HDGFL3-206ENST00000568294 FGD1P98174 961 aa10.77□□□□□ -0.69
HDGFL3-206ENST00000568294 KIAA2012Q0VF49 1180 aa10.77□□□□□ -0.69
HDGFL3-206ENST00000568294 NOL7Q9UMY1 257 aaKnown RBP10.77□□□□□ -0.69
HDGFL3-206ENST00000568294 RIMS1Q86UR5 1692 aaKnown RBP10.77□□□□□ -0.69
HDGFL3-206ENST00000568294 TNRQ92752 1358 aa10.77□□□□□ -0.69
HDGFL3-206ENST00000568294 SLC39A6Q13433 755 aa10.77□□□□□ -0.69
HDGFL3-206ENST00000568294 ESCO1Q5FWF5 840 aa10.77□□□□□ -0.69
HDGFL3-206ENST00000568294 RUFY3Q7L099 469 aa10.77□□□□□ -0.69
HDGFL3-206ENST00000568294 CLASRPQ8N2M8 674 aaKnown RBP10.77□□□□□ -0.69
HDGFL3-206ENST00000568294 DNAAF4Q8WXU2 420 aa10.77□□□□□ -0.69
HDGFL3-206ENST00000568294 PDRG1Q9NUG6 133 aa10.77□□□□□ -0.69
HDGFL3-206ENST00000568294 MAP3K2Q9Y2U5 619 aa10.77□□□□□ -0.69
HDGFL3-206ENST00000568294 FLT4P35916 1363 aa10.76□□□□□ -0.69
HDGFL3-206ENST00000568294 IBTKQ9P2D0 1353 aaPredicted RBP10.76□□□□□ -0.69
HDGFL3-206ENST00000568294 GOLGA6L4A6NEF3 574 aa10.76□□□□□ -0.69
HDGFL3-206ENST00000568294 KDM4AO75164 1064 aa10.76□□□□□ -0.69
HDGFL3-206ENST00000568294 KCNA6P17658 529 aa10.76□□□□□ -0.69
HDGFL3-206ENST00000568294 DDX11Q96FC9 970 aa10.76□□□□□ -0.69
HDGFL3-206ENST00000568294 KIAA0232Q92628 1395 aa10.76□□□□□ -0.69
HDGFL3-206ENST00000568294 HSP90B1P14625 803 aaKnown RBP10.76□□□□□ -0.69
HDGFL3-206ENST00000568294 FSD1Q9BTV5 496 aa10.76□□□□□ -0.69
HDGFL3-206ENST00000568294 ZNF330Q9Y3S2 320 aaPredicted RBP10.76□□□□□ -0.69
HDGFL3-206ENST00000568294 USP6P35125 1406 aa10.76□□□□□ -0.69
HDGFL3-206ENST00000568294 MCM2P49736 904 aa10.76□□□□□ -0.69
HDGFL3-206ENST00000568294 NBPF6Q5VWK0 638 aa10.76□□□□□ -0.69
HDGFL3-206ENST00000568294 KIF1BPQ96EK5 621 aa10.76□□□□□ -0.69
HDGFL3-206ENST00000568294 NBPF4Q96M43 638 aa10.76□□□□□ -0.69
HDGFL3-206ENST00000568294 PSME1Q06323 249 aa10.75□□□□□ -0.69
HDGFL3-206ENST00000568294 TLR7Q9NYK1 1049 aaKnown RBP10.75□□□□□ -0.69
HDGFL3-206ENST00000568294 A0A087WWV3 80 aa10.75□□□□□ -0.69
HDGFL3-206ENST00000568294 RAB11FIP3O75154 756 aa10.75□□□□□ -0.69
HDGFL3-206ENST00000568294 ZSCAN22P10073 491 aaPredicted RBP10.75□□□□□ -0.69
HDGFL3-206ENST00000568294 DNAJC2Q99543 621 aaKnown RBP10.75□□□□□ -0.69
HDGFL3-206ENST00000568294 SETD1BQ9UPS6 1966 aaKnown RBP10.75□□□□□ -0.69
HDGFL3-206ENST00000568294 SGSM2O43147 1006 aa10.74□□□□□ -0.69
HDGFL3-206ENST00000568294 HSPA4P34932 840 aa10.74□□□□□ -0.69
HDGFL3-206ENST00000568294 OSBPL3Q9H4L5 887 aa10.74□□□□□ -0.69
HDGFL3-206ENST00000568294 TAF6LQ9Y6J9 622 aa10.74□□□□□ -0.69
HDGFL3-206ENST00000568294 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.74□□□□□ -0.69
HDGFL3-206ENST00000568294 CEP170BQ9Y4F5 1589 aaPredicted RBP10.74□□□□□ -0.69
HDGFL3-206ENST00000568294 PHF14O94880 888 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms