RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 AACSQ86V21 672 aa12.84□□□□□ -0.35
PALB2-206ENST00000568219 PHF23Q9BUL5 403 aaPredicted RBP12.84□□□□□ -0.35
PALB2-206ENST00000568219 BOLA2Q9H3K6 86 aa12.84□□□□□ -0.35
PALB2-206ENST00000568219 PNMA6EA0A0J9YXQ4 647 aa12.84□□□□□ -0.35
PALB2-206ENST00000568219 ANXA1P04083 346 aa12.84□□□□□ -0.35
PALB2-206ENST00000568219 BMS1Q14692 1282 aaKnown RBP12.84□□□□□ -0.35
PALB2-206ENST00000568219 PPP1R42Q7Z4L9 355 aa12.84□□□□□ -0.35
PALB2-206ENST00000568219 ZSCAN31Q96LW9 406 aaPredicted RBP12.84□□□□□ -0.35
PALB2-206ENST00000568219 PTPRTO14522 1441 aa12.84□□□□□ -0.35
PALB2-206ENST00000568219 CCDC69A6NI79 296 aa12.84□□□□□ -0.35
PALB2-206ENST00000568219 CYP2E1P05181 493 aaPredicted RBP12.84□□□□□ -0.35
PALB2-206ENST00000568219 ANAPC15P60006 121 aa12.84□□□□□ -0.35
PALB2-206ENST00000568219 TEFQ10587 303 aa12.84□□□□□ -0.35
PALB2-206ENST00000568219 SYT10Q6XYQ8 523 aa12.84□□□□□ -0.35
PALB2-206ENST00000568219 TMC6Q7Z403 805 aa12.84□□□□□ -0.35
PALB2-206ENST00000568219 CEP57L1Q8IYX8 460 aa12.84□□□□□ -0.35
PALB2-206ENST00000568219 DNAI1Q9UI46 699 aa12.84□□□□□ -0.35
PALB2-206ENST00000568219 FLIIQ13045 1269 aa12.83□□□□□ -0.36
PALB2-206ENST00000568219 CLEC17AQ6ZS10 378 aa12.83□□□□□ -0.36
PALB2-206ENST00000568219 C10orf67Q8IYJ2 551 aa12.83□□□□□ -0.36
PALB2-206ENST00000568219 ZNF397Q8NF99 534 aaPredicted RBP12.83□□□□□ -0.36
PALB2-206ENST00000568219 DNAJC2Q99543 621 aaKnown RBP12.83□□□□□ -0.36
PALB2-206ENST00000568219 CCDC8Q9H0W5 538 aaPredicted RBP12.83□□□□□ -0.36
PALB2-206ENST00000568219 DISP1Q96F81 1524 aa12.83□□□□□ -0.36
PALB2-206ENST00000568219 ARHGAP29Q52LW3 1261 aa12.83□□□□□ -0.36
PALB2-206ENST00000568219 SYCP2Q9BX26 1530 aa12.83□□□□□ -0.36
PALB2-206ENST00000568219 MSH6P52701 1360 aa12.83□□□□□ -0.36
PALB2-206ENST00000568219 FOXO3O43524 673 aa12.83□□□□□ -0.36
PALB2-206ENST00000568219 CCDC34Q96HJ3 373 aa12.83□□□□□ -0.36
PALB2-206ENST00000568219 AK9Q5TCS8 1911 aa12.83□□□□□ -0.36
PALB2-206ENST00000568219 ANKRD36BQ8N2N9 1353 aa12.83□□□□□ -0.36
PALB2-206ENST00000568219 PES1O00541 588 aaKnown RBP12.82□□□□□ -0.36
PALB2-206ENST00000568219 SLU7O95391 586 aaKnown RBP12.82□□□□□ -0.36
PALB2-206ENST00000568219 LMAN1P49257 510 aa12.82□□□□□ -0.36
PALB2-206ENST00000568219 GRIN2AQ12879 1464 aa12.82□□□□□ -0.36
PALB2-206ENST00000568219 ZSCAN25Q6NSZ9 544 aa12.82□□□□□ -0.36
PALB2-206ENST00000568219 A0A1W2PP64 1363 aa12.82□□□□□ -0.36
PALB2-206ENST00000568219 KDM5DQ9BY66 1539 aa12.82□□□□□ -0.36
PALB2-206ENST00000568219 STK38Q15208 465 aa12.82□□□□□ -0.36
PALB2-206ENST00000568219 DDX19AQ9NUU7 478 aaKnown RBP12.82□□□□□ -0.36
PALB2-206ENST00000568219 CPLX1O14810 134 aa12.81□□□□□ -0.36
PALB2-206ENST00000568219 CCT2P78371 535 aaKnown RBP12.81□□□□□ -0.36
PALB2-206ENST00000568219 NCBP1Q09161 790 aaKnown RBP12.81□□□□□ -0.36
PALB2-206ENST00000568219 ERCC6LQ2NKX8 1250 aa12.81□□□□□ -0.36
PALB2-206ENST00000568219 SYNE3Q6ZMZ3 975 aa12.81□□□□□ -0.36
PALB2-206ENST00000568219 ATP2B1P20020 1258 aa12.81□□□□□ -0.36
PALB2-206ENST00000568219 TAF7Q15545 349 aaPredicted RBP12.81□□□□□ -0.36
PALB2-206ENST00000568219 CWC15Q9P013 229 aaKnown RBP12.81□□□□□ -0.36
PALB2-206ENST00000568219 SNX14Q9Y5W7 946 aa12.81□□□□□ -0.36
PALB2-206ENST00000568219 ARID5BQ14865 1188 aa12.81□□□□□ -0.36
PALB2-206ENST00000568219 CFAP100Q494V2 611 aa12.81□□□□□ -0.36
PALB2-206ENST00000568219 HSP90B2PQ58FF3 399 aa12.81□□□□□ -0.36
PALB2-206ENST00000568219 HSP90AB4PQ58FF6 505 aa12.81□□□□□ -0.36
PALB2-206ENST00000568219 KIF1BPQ96EK5 621 aa12.81□□□□□ -0.36
PALB2-206ENST00000568219 CFAP45Q9UL16 551 aa12.81□□□□□ -0.36
PALB2-206ENST00000568219 NCKAP5LQ9HCH0 1330 aa12.81□□□□□ -0.36
PALB2-206ENST00000568219 IDI1Q13907 227 aa12.8□□□□□ -0.36
PALB2-206ENST00000568219 LEKR1Q6ZMV7 388 aa12.8□□□□□ -0.36
PALB2-206ENST00000568219 RASEFQ8IZ41 740 aa12.8□□□□□ -0.36
PALB2-206ENST00000568219 AOPEPQ8N6M6 819 aa12.8□□□□□ -0.36
PALB2-206ENST00000568219 RHPN1Q8TCX5 695 aa12.8□□□□□ -0.36
PALB2-206ENST00000568219 SH2B1Q9NRF2 756 aaPredicted RBP12.8□□□□□ -0.36
PALB2-206ENST00000568219 ZNF330Q9Y3S2 320 aaPredicted RBP12.8□□□□□ -0.36
PALB2-206ENST00000568219 ZNF75DP51815 510 aa12.8□□□□□ -0.36
PALB2-206ENST00000568219 BRPF1P55201 1214 aaPredicted RBP12.8□□□□□ -0.36
PALB2-206ENST00000568219 CACTINQ8WUQ7 758 aaKnown RBP12.8□□□□□ -0.36
PALB2-206ENST00000568219 TOMM22Q9NS69 142 aa12.8□□□□□ -0.36
PALB2-206ENST00000568219 GABPB1Q06547 395 aaPredicted RBP12.8□□□□□ -0.36
PALB2-206ENST00000568219 CCAR1Q8IX12 1150 aaKnown RBP12.8□□□□□ -0.36
PALB2-206ENST00000568219 NEUROD6Q96NK8 337 aa12.8□□□□□ -0.36
PALB2-206ENST00000568219 ABCC4O15439 1325 aa12.8□□□□□ -0.36
PALB2-206ENST00000568219 CDC37L1Q7L3B6 337 aa12.79□□□□□ -0.36
PALB2-206ENST00000568219 AK7Q96M32 723 aa12.79□□□□□ -0.36
PALB2-206ENST00000568219 HSP90AB2PQ58FF8 381 aa12.79□□□□□ -0.36
PALB2-206ENST00000568219 TTC6Q86TZ1 520 aa12.79□□□□□ -0.36
PALB2-206ENST00000568219 FSIP1Q8NA03 581 aa12.79□□□□□ -0.36
PALB2-206ENST00000568219 ST7Q9NRC1 585 aa12.79□□□□□ -0.36
PALB2-206ENST00000568219 GLRX3O76003 335 aaKnown RBP12.79□□□□□ -0.36
PALB2-206ENST00000568219 NEK11Q8NG66 645 aa12.79□□□□□ -0.36
PALB2-206ENST00000568219 LARP1Q6PKG0 1096 aaKnown RBP12.79□□□□□ -0.36
PALB2-206ENST00000568219 PTPRCP08575 1304 aa12.78□□□□□ -0.36
PALB2-206ENST00000568219 LRRIQ1Q96JM4 1722 aa12.78□□□□□ -0.36
PALB2-206ENST00000568219 NCOA3Q9Y6Q9 1424 aa12.78□□□□□ -0.36
PALB2-206ENST00000568219 MCM6Q14566 821 aa12.78□□□□□ -0.36
PALB2-206ENST00000568219 RUFY3Q7L099 469 aa12.78□□□□□ -0.36
PALB2-206ENST00000568219 CCDC102AQ96A19 550 aa12.78□□□□□ -0.36
PALB2-206ENST00000568219 ERVK-7P63135 1459 aa12.78□□□□□ -0.36
PALB2-206ENST00000568219 RTEL1-TNFRSF6BF6WH68 1400 aa12.78□□□□□ -0.36
PALB2-206ENST00000568219 ANO10Q9NW15 660 aa12.78□□□□□ -0.36
PALB2-206ENST00000568219 TRAPPC8Q9Y2L5 1435 aa12.78□□□□□ -0.36
PALB2-206ENST00000568219 ATP8B2P98198 1209 aa12.78□□□□□ -0.36
PALB2-206ENST00000568219 RAB11FIP4Q86YS3 637 aa12.78□□□□□ -0.36
PALB2-206ENST00000568219 GPATCH11Q8N954 259 aa12.78□□□□□ -0.36
PALB2-206ENST00000568219 KCNF1Q9H3M0 494 aa12.78□□□□□ -0.36
PALB2-206ENST00000568219 RBM8AQ9Y5S9 174 aaKnown RBP12.78□□□□□ -0.36
PALB2-206ENST00000568219 LMOD1P29536 600 aaPredicted RBP12.77□□□□□ -0.36
PALB2-206ENST00000568219 CUL4AQ13619 759 aa12.77□□□□□ -0.36
PALB2-206ENST00000568219 PHACTR2O75167 634 aa12.77□□□□□ -0.37
PALB2-206ENST00000568219 NR1I2O75469 434 aa12.77□□□□□ -0.37
PALB2-206ENST00000568219 RAPGEF3O95398 923 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms