RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 SKOR1P84550 965 aa10.82□□□□□ -0.68
SMG1-214ENST00000568038 RC3H1Q5TC82 1133 aaKnown RBP10.82□□□□□ -0.68
SMG1-214ENST00000568038 RIC3Q7Z5B4 369 aa10.82□□□□□ -0.68
SMG1-214ENST00000568038 SIRT1Q96EB6 747 aa10.82□□□□□ -0.68
SMG1-214ENST00000568038 TECPR2O15040 1411 aa10.82□□□□□ -0.68
SMG1-214ENST00000568038 XRN1Q8IZH2 1706 aaKnown RBP10.81□□□□□ -0.68
SMG1-214ENST00000568038 DLC1Q96QB1 1528 aa10.81□□□□□ -0.68
SMG1-214ENST00000568038 ARHGEF28Q8N1W1 1705 aaKnown RBP10.81□□□□□ -0.68
SMG1-214ENST00000568038 STRCP1A6NGW2 1772 aa10.8□□□□□ -0.68
SMG1-214ENST00000568038 CPS1P31327 1500 aa10.8□□□□□ -0.68
SMG1-214ENST00000568038 CCNYL3P0C7X3 344 aa10.8□□□□□ -0.68
SMG1-214ENST00000568038 C14orf37Q86TY3 774 aa10.8□□□□□ -0.68
SMG1-214ENST00000568038 SNIP1Q8TAD8 396 aaKnown RBP10.8□□□□□ -0.68
SMG1-214ENST00000568038 AAASQ9NRG9 546 aa10.8□□□□□ -0.68
SMG1-214ENST00000568038 PTCH1Q13635 1447 aa10.8□□□□□ -0.68
SMG1-214ENST00000568038 FAM135BQ49AJ0 1406 aa10.8□□□□□ -0.68
SMG1-214ENST00000568038 NWD1Q149M9 1564 aa10.8□□□□□ -0.68
SMG1-214ENST00000568038 KNDC1Q76NI1 1749 aa10.8□□□□□ -0.68
SMG1-214ENST00000568038 SPDYE5A6NIY4 337 aa10.79□□□□□ -0.68
SMG1-214ENST00000568038 POTECB2RU33 542 aa10.79□□□□□ -0.68
SMG1-214ENST00000568038 SPTLC1O15269 473 aa10.79□□□□□ -0.68
SMG1-214ENST00000568038 J3QL48 77 aa10.78□□□□□ -0.68
SMG1-214ENST00000568038 WNT7BP56706 349 aa10.78□□□□□ -0.68
SMG1-214ENST00000568038 CABLES1Q8TDN4 633 aa10.78□□□□□ -0.68
SMG1-214ENST00000568038 TESK2Q96S53 571 aa10.78□□□□□ -0.68
SMG1-214ENST00000568038 NKTRP30414 1462 aaKnown RBP10.78□□□□□ -0.68
SMG1-214ENST00000568038 TMEM94Q12767 1356 aa10.77□□□□□ -0.68
SMG1-214ENST00000568038 SMPD1P17405 629 aa10.77□□□□□ -0.69
SMG1-214ENST00000568038 PTPRNQ16849 979 aa10.77□□□□□ -0.69
SMG1-214ENST00000568038 TSC1Q92574 1164 aa10.77□□□□□ -0.69
SMG1-214ENST00000568038 ZBTB3Q9H5J0 574 aa10.77□□□□□ -0.69
SMG1-214ENST00000568038 QRICH2Q9H0J4 1663 aa10.76□□□□□ -0.69
SMG1-214ENST00000568038 LRRC7Q96NW7 1537 aa10.76□□□□□ -0.69
SMG1-214ENST00000568038 NUTM2BA6NNL0 878 aaPredicted RBP10.76□□□□□ -0.69
SMG1-214ENST00000568038 NUTM2EB1AL46 878 aaPredicted RBP10.76□□□□□ -0.69
SMG1-214ENST00000568038 AXIN1O15169 862 aa10.76□□□□□ -0.69
SMG1-214ENST00000568038 CTHP32929 405 aa10.76□□□□□ -0.69
SMG1-214ENST00000568038 GJA5P36382 358 aa10.76□□□□□ -0.69
SMG1-214ENST00000568038 TMF1P82094 1093 aa10.76□□□□□ -0.69
SMG1-214ENST00000568038 LINC01559Q495D7 138 aa10.76□□□□□ -0.69
SMG1-214ENST00000568038 NUTM2AQ8IVF1 878 aaPredicted RBP10.76□□□□□ -0.69
SMG1-214ENST00000568038 POLR3GLQ9BT43 218 aa10.76□□□□□ -0.69
SMG1-214ENST00000568038 EVA1BQ9NVM1 165 aa10.76□□□□□ -0.69
SMG1-214ENST00000568038 DACH1Q9UI36 760 aa10.76□□□□□ -0.69
SMG1-214ENST00000568038 EVC2Q86UK5 1308 aa10.76□□□□□ -0.69
SMG1-214ENST00000568038 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.75□□□□□ -0.69
SMG1-214ENST00000568038 C11orf95C9JLR9 678 aaPredicted RBP10.75□□□□□ -0.69
SMG1-214ENST00000568038 CFAP99D6REC4 459 aa10.75□□□□□ -0.69
SMG1-214ENST00000568038 KCNH2Q12809 1159 aa10.75□□□□□ -0.69
SMG1-214ENST00000568038 MYSM1Q5VVJ2 828 aa10.75□□□□□ -0.69
SMG1-214ENST00000568038 EHBP1Q8NDI1 1231 aa10.75□□□□□ -0.69
SMG1-214ENST00000568038 CDK19Q9BWU1 502 aa10.75□□□□□ -0.69
SMG1-214ENST00000568038 UNC93B1Q9H1C4 597 aa10.75□□□□□ -0.69
SMG1-214ENST00000568038 LIMD1Q9UGP4 676 aa10.75□□□□□ -0.69
SMG1-214ENST00000568038 DISP3Q9P2K9 1392 aa10.75□□□□□ -0.69
SMG1-214ENST00000568038 LTBP4Q8N2S1 1624 aa10.74□□□□□ -0.69
SMG1-214ENST00000568038 WASLO00401 505 aaPredicted RBP10.74□□□□□ -0.69
SMG1-214ENST00000568038 AVPP01185 164 aa10.74□□□□□ -0.69
SMG1-214ENST00000568038 SRPK2P78362 688 aaKnown RBP10.74□□□□□ -0.69
SMG1-214ENST00000568038 BAP1Q92560 729 aa10.74□□□□□ -0.69
SMG1-214ENST00000568038 C19orf44Q9H6X5 657 aa10.74□□□□□ -0.69
SMG1-214ENST00000568038 SBNO2Q9Y2G9 1366 aa10.74□□□□□ -0.69
SMG1-214ENST00000568038 ADGRL3Q9HAR2 1447 aa10.74□□□□□ -0.69
SMG1-214ENST00000568038 ALDH1A1P00352 501 aa10.73□□□□□ -0.69
SMG1-214ENST00000568038 DESI1Q6ICB0 168 aa10.73□□□□□ -0.69
SMG1-214ENST00000568038 NCOA3Q9Y6Q9 1424 aa10.73□□□□□ -0.69
SMG1-214ENST00000568038 ATF3P18847 181 aa10.72□□□□□ -0.69
SMG1-214ENST00000568038 SH3BP2P78314 561 aa10.72□□□□□ -0.69
SMG1-214ENST00000568038 POLR3EQ9NVU0 708 aa10.72□□□□□ -0.69
SMG1-214ENST00000568038 MSH6P52701 1360 aa10.72□□□□□ -0.69
SMG1-214ENST00000568038 TULP4Q9NRJ4 1543 aa10.72□□□□□ -0.69
SMG1-214ENST00000568038 NALCNQ8IZF0 1738 aa10.72□□□□□ -0.69
SMG1-214ENST00000568038 QPCTQ16769 361 aa10.71□□□□□ -0.69
SMG1-214ENST00000568038 KIF7Q2M1P5 1343 aa10.71□□□□□ -0.69
SMG1-214ENST00000568038 CDCA8Q53HL2 280 aa10.71□□□□□ -0.69
SMG1-214ENST00000568038 LYPD8Q6UX82 237 aa10.71□□□□□ -0.69
SMG1-214ENST00000568038 XIRP1Q702N8 1843 aaKnown RBP10.71□□□□□ -0.69
SMG1-214ENST00000568038 HPS1Q92902 700 aa10.71□□□□□ -0.69
SMG1-214ENST00000568038 WASHC2AQ641Q2 1341 aa10.7□□□□□ -0.7
SMG1-214ENST00000568038 CTC1Q2NKJ3 1217 aa10.7□□□□□ -0.7
SMG1-214ENST00000568038 PRPF38BQ5VTL8 546 aaKnown RBP10.7□□□□□ -0.7
SMG1-214ENST00000568038 ZNF775Q96BV0 537 aaPredicted RBP10.7□□□□□ -0.7
SMG1-214ENST00000568038 NUDT16Q96DE0 195 aaKnown RBP10.7□□□□□ -0.7
SMG1-214ENST00000568038 ADGRB2O60241 1585 aa10.69□□□□□ -0.7
SMG1-214ENST00000568038 CCDC7Q96M83 1385 aa10.69□□□□□ -0.7
SMG1-214ENST00000568038 PRR36Q9H6K5 1346 aa10.69□□□□□ -0.7
SMG1-214ENST00000568038 CRIPAKQ8N1N5 446 aa10.69□□□□□ -0.7
SMG1-214ENST00000568038 TMC1Q8TDI8 760 aa10.69□□□□□ -0.7
SMG1-214ENST00000568038 GPBP1L1Q9HC44 474 aaPredicted RBP10.69□□□□□ -0.7
SMG1-214ENST00000568038 RSPH6AQ9H0K4 717 aa10.68□□□□□ -0.7
SMG1-214ENST00000568038 MAP10Q9P2G4 905 aa10.68□□□□□ -0.7
SMG1-214ENST00000568038 GMPR2Q9P2T1 348 aaKnown RBP10.68□□□□□ -0.7
SMG1-214ENST00000568038 CDC42BPGQ6DT37 1551 aa10.68□□□□□ -0.7
SMG1-214ENST00000568038 ATAD2Q6PL18 1390 aa10.67□□□□□ -0.7
SMG1-214ENST00000568038 PER1O15534 1290 aaPredicted RBP10.67□□□□□ -0.7
SMG1-214ENST00000568038 CLK2P49760 499 aaKnown RBP10.67□□□□□ -0.7
SMG1-214ENST00000568038 ESCO1Q5FWF5 840 aa10.67□□□□□ -0.7
SMG1-214ENST00000568038 PUS7Q96PZ0 661 aaKnown RBP10.67□□□□□ -0.7
SMG1-214ENST00000568038 SLC12A5Q9H2X9 1139 aa10.67□□□□□ -0.7
SMG1-214ENST00000568038 CABP1Q9NZU7 370 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms