RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 WRNQ14191 1432 aaPredicted RBP eCLIP8.35□□□□□ -1.07
CAPN3-217ENST00000567817 TOP2BQ02880 1626 aa8.34□□□□□ -1.07
CAPN3-217ENST00000567817 PALM3A6NDB9 673 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-217ENST00000567817 PSME1Q06323 249 aa8.34□□□□□ -1.07
CAPN3-217ENST00000567817 GNASQ5JWF2 1037 aa8.34□□□□□ -1.07
CAPN3-217ENST00000567817 NANOS1Q8WY41 292 aaKnown RBP8.34□□□□□ -1.07
CAPN3-217ENST00000567817 ZNF777Q9ULD5 760 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-217ENST00000567817 DYRK1BQ9Y463 629 aa8.34□□□□□ -1.07
CAPN3-217ENST00000567817 GLI2P10070 1586 aa8.33□□□□□ -1.08
CAPN3-217ENST00000567817 TMEM214Q6NUQ4 689 aaKnown RBP8.33□□□□□ -1.08
CAPN3-217ENST00000567817 PPARGC1BQ86YN6 1023 aaKnown RBP8.33□□□□□ -1.08
CAPN3-217ENST00000567817 SLC4A9Q96Q91 983 aa8.33□□□□□ -1.08
CAPN3-217ENST00000567817 MKRN1Q9UHC7 482 aaKnown RBP8.33□□□□□ -1.08
CAPN3-217ENST00000567817 LMTK3Q96Q04 1460 aa8.32□□□□□ -1.08
CAPN3-217ENST00000567817 BACH1O14867 736 aa8.32□□□□□ -1.08
CAPN3-217ENST00000567817 GMPRP36959 345 aa8.32□□□□□ -1.08
CAPN3-217ENST00000567817 SMTNP53814 917 aa8.32□□□□□ -1.08
CAPN3-217ENST00000567817 RHBDD1Q8TEB9 315 aa8.32□□□□□ -1.08
CAPN3-217ENST00000567817 TEX14Q8IWB6 1497 aa8.32□□□□□ -1.08
CAPN3-217ENST00000567817 RUSC2Q8N2Y8 1516 aa8.31□□□□□ -1.08
CAPN3-217ENST00000567817 CLDN10P78369 228 aa8.31□□□□□ -1.08
CAPN3-217ENST00000567817 MTFR1Q15390 333 aa8.31□□□□□ -1.08
CAPN3-217ENST00000567817 LARGE2Q8N3Y3 721 aa8.31□□□□□ -1.08
CAPN3-217ENST00000567817 OGFOD1Q8N543 542 aa8.31□□□□□ -1.08
CAPN3-217ENST00000567817 GMCL1Q96IK5 515 aa8.31□□□□□ -1.08
CAPN3-217ENST00000567817 TIMMDC1Q9NPL8 285 aa8.31□□□□□ -1.08
CAPN3-217ENST00000567817 DNAAF2Q9NVR5 837 aaKnown RBP8.31□□□□□ -1.08
CAPN3-217ENST00000567817 TSPOAP1O95153 1857 aa8.31□□□□□ -1.08
CAPN3-217ENST00000567817 PLB1Q6P1J6 1458 aa8.31□□□□□ -1.08
CAPN3-217ENST00000567817 C4orf17Q53FE4 359 aa8.3□□□□□ -1.08
CAPN3-217ENST00000567817 SIX5Q8N196 739 aa8.3□□□□□ -1.08
CAPN3-217ENST00000567817 ZNF358Q9NW07 568 aa8.3□□□□□ -1.08
CAPN3-217ENST00000567817 SERTAD1Q9UHV2 236 aa8.3□□□□□ -1.08
CAPN3-217ENST00000567817 KIAA1024Q9UPX6 916 aa8.3□□□□□ -1.08
CAPN3-217ENST00000567817 A0A1B0GTH6 734 aa8.29□□□□□ -1.08
CAPN3-217ENST00000567817 CDC14CA4D256 554 aa8.29□□□□□ -1.08
CAPN3-217ENST00000567817 A6NJY4 79 aa8.29□□□□□ -1.08
CAPN3-217ENST00000567817 ZBTB7BO15156 539 aaPredicted RBP8.29□□□□□ -1.08
CAPN3-217ENST00000567817 CCDC102BQ68D86 513 aa8.29□□□□□ -1.08
CAPN3-217ENST00000567817 SV2AQ7L0J3 742 aa8.29□□□□□ -1.08
CAPN3-217ENST00000567817 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.29□□□□□ -1.08
CAPN3-217ENST00000567817 TPCN2Q8NHX9 752 aa8.29□□□□□ -1.08
CAPN3-217ENST00000567817 H7C1W4 665 aa8.28□□□□□ -1.08
CAPN3-217ENST00000567817 CDK2AP1O14519 115 aa8.28□□□□□ -1.08
CAPN3-217ENST00000567817 INSM1Q01101 510 aaPredicted RBP8.28□□□□□ -1.08
CAPN3-217ENST00000567817 TRIM22Q8IYM9 498 aa8.28□□□□□ -1.08
CAPN3-217ENST00000567817 GAS2L1Q99501 681 aaPredicted RBP8.28□□□□□ -1.08
CAPN3-217ENST00000567817 NIFKQ9BYG3 293 aaKnown RBP8.28□□□□□ -1.08
CAPN3-217ENST00000567817 M0R2N6 131 aa8.27□□□□□ -1.09
CAPN3-217ENST00000567817 F11P03951 625 aa8.27□□□□□ -1.09
CAPN3-217ENST00000567817 RASA1P20936 1047 aa8.27□□□□□ -1.09
CAPN3-217ENST00000567817 LMOD1P29536 600 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-217ENST00000567817 PHKA2P46019 1235 aa8.27□□□□□ -1.09
CAPN3-217ENST00000567817 CFAP70Q5T0N1 1121 aa8.27□□□□□ -1.09
CAPN3-217ENST00000567817 VWA5B2Q8N398 1253 aa8.27□□□□□ -1.09
CAPN3-217ENST00000567817 CUEDC1Q9NWM3 386 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-217ENST00000567817 IQSEC3Q9UPP2 1182 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-217ENST00000567817 ABCC2Q92887 1545 aa8.27□□□□□ -1.09
CAPN3-217ENST00000567817 PPRC1Q5VV67 1664 aaKnown RBP8.27□□□□□ -1.09
CAPN3-217ENST00000567817 PLA2G4AP47712 749 aa8.26□□□□□ -1.09
CAPN3-217ENST00000567817 EPHA4P54764 986 aa8.26□□□□□ -1.09
CAPN3-217ENST00000567817 KANK4Q5T7N3 995 aaPredicted RBP8.26□□□□□ -1.09
CAPN3-217ENST00000567817 RIPOR1Q6ZS17 1223 aa8.26□□□□□ -1.09
CAPN3-217ENST00000567817 ZNF295-AS1Q8N0V1 137 aa8.26□□□□□ -1.09
CAPN3-217ENST00000567817 GPR161Q8N6U8 529 aaKnown RBP8.26□□□□□ -1.09
CAPN3-217ENST00000567817 ZNF837Q96EG3 531 aaPredicted RBP8.26□□□□□ -1.09
CAPN3-217ENST00000567817 ZNF594Q96JF6 807 aaPredicted RBP8.26□□□□□ -1.09
CAPN3-217ENST00000567817 RBM19Q9Y4C8 960 aaKnown RBP8.26□□□□□ -1.09
CAPN3-217ENST00000567817 KIAA0586Q9BVV6 1533 aa8.25□□□□□ -1.09
CAPN3-217ENST00000567817 FAM196BA6NMK8 535 aa8.25□□□□□ -1.09
CAPN3-217ENST00000567817 DKK1O94907 266 aa8.25□□□□□ -1.09
CAPN3-217ENST00000567817 LARP1Q6PKG0 1096 aaKnown RBP8.25□□□□□ -1.09
CAPN3-217ENST00000567817 VRTNQ9H8Y1 702 aa8.25□□□□□ -1.09
CAPN3-217ENST00000567817 SCHIP1Q9P0W5 487 aaPredicted RBP8.25□□□□□ -1.09
CAPN3-217ENST00000567817 ASXL2Q76L83 1435 aa8.25□□□□□ -1.09
CAPN3-217ENST00000567817 FOXK2Q01167 660 aa8.24□□□□□ -1.09
CAPN3-217ENST00000567817 PTK7Q13308 1070 aa8.24□□□□□ -1.09
CAPN3-217ENST00000567817 LBRQ14739 615 aaKnown RBP8.24□□□□□ -1.09
CAPN3-217ENST00000567817 C14orf37Q86TY3 774 aa8.24□□□□□ -1.09
CAPN3-217ENST00000567817 C1orf216Q8TAB5 229 aa8.24□□□□□ -1.09
CAPN3-217ENST00000567817 GPAMQ9HCL2 828 aa8.24□□□□□ -1.09
CAPN3-217ENST00000567817 USP3Q9Y6I4 520 aa8.24□□□□□ -1.09
CAPN3-217ENST00000567817 UHRF1BP1LA0JNW5 1464 aa8.24□□□□□ -1.09
CAPN3-217ENST00000567817 MAP3K4Q9Y6R4 1608 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 BIVM-ERCC5R4GMW8 1640 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 USP17L15C9J2P7 530 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 USP17L10C9JJH3 530 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 USP17L13C9JLJ4 530 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 USP17L12C9JPN9 530 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 USP17L11C9JVI0 530 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 USP17L21D6R901 530 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 USP17L18D6R9N7 530 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 USP17L22D6RA61 530 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 USP17L17D6RBQ6 530 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 USP17L19D6RCP7 530 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 USP17L20D6RJB6 530 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 MSX1P28360 303 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 USP17L24Q0WX57 530 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 DBN1Q16643 649 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 CRTC2Q53ET0 693 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms