RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 MRC1P22897 1456 aa25.31■■□□□ 1.64
GTF3C1-207ENST00000567806 GNAT3A8MTJ3 354 aa25.3■■□□□ 1.64
GTF3C1-207ENST00000567806 CHRNA5P30532 468 aa25.3■■□□□ 1.64
GTF3C1-207ENST00000567806 CANXP27824 592 aaKnown RBP25.29■■□□□ 1.64
GTF3C1-207ENST00000567806 NFIXQ14938 502 aa25.28■■□□□ 1.64
GTF3C1-207ENST00000567806 C9orf131Q5VYM1 1079 aa25.28■■□□□ 1.64
GTF3C1-207ENST00000567806 CFAP53Q96M91 514 aa25.28■■□□□ 1.64
GTF3C1-207ENST00000567806 COL15A1P39059 1388 aa25.28■■□□□ 1.64
GTF3C1-207ENST00000567806 IL17REQ8NFR9 667 aa25.27■■□□□ 1.64
GTF3C1-207ENST00000567806 TEX13AQ9BXU3 409 aaPredicted RBP25.27■■□□□ 1.64
GTF3C1-207ENST00000567806 KCPQ6ZWJ8 1503 aa25.27■■□□□ 1.64
GTF3C1-207ENST00000567806 A0A087WZG4 1122 aa25.26■■□□□ 1.63
GTF3C1-207ENST00000567806 SERPINB2P05120 415 aa25.25■■□□□ 1.63
GTF3C1-207ENST00000567806 ZNF790Q6PG37 636 aa25.25■■□□□ 1.63
GTF3C1-207ENST00000567806 CEP350Q5VT06 3117 aa25.25■■□□□ 1.63
GTF3C1-207ENST00000567806 ZNF496Q96IT1 587 aaPredicted RBP25.24■■□□□ 1.63
GTF3C1-207ENST00000567806 COL3A1P02461 1466 aaPredicted RBP25.23■■□□□ 1.63
GTF3C1-207ENST00000567806 TOMM70O94826 608 aa25.23■■□□□ 1.63
GTF3C1-207ENST00000567806 BCL2L12Q9HB09 334 aa25.23■■□□□ 1.63
GTF3C1-207ENST00000567806 NUDCQ9Y266 331 aa25.23■■□□□ 1.63
GTF3C1-207ENST00000567806 EIF5P55010 431 aaKnown RBP25.22■■□□□ 1.63
GTF3C1-207ENST00000567806 RNF181Q9P0P0 153 aa25.22■■□□□ 1.63
GTF3C1-207ENST00000567806 ADAMTS7Q9UKP4 1686 aa25.22■■□□□ 1.63
GTF3C1-207ENST00000567806 BICDL1Q6ZP65 573 aa25.21■■□□□ 1.63
GTF3C1-207ENST00000567806 NPM2Q86SE8 214 aaKnown RBP25.21■■□□□ 1.63
GTF3C1-207ENST00000567806 NMRK2Q9NPI5 230 aa25.21■■□□□ 1.63
GTF3C1-207ENST00000567806 HEG1Q9ULI3 1381 aa25.2■■□□□ 1.63
GTF3C1-207ENST00000567806 BRCA1P38398 1863 aaKnown RBP25.2■■□□□ 1.62
GTF3C1-207ENST00000567806 PRKAR2BP31323 418 aa25.2■■□□□ 1.62
GTF3C1-207ENST00000567806 PHACTR3Q96KR7 559 aa25.2■■□□□ 1.62
GTF3C1-207ENST00000567806 FMNL2Q96PY5 1086 aa25.2■■□□□ 1.62
GTF3C1-207ENST00000567806 ZNF330Q9Y3S2 320 aaPredicted RBP25.2■■□□□ 1.62
GTF3C1-207ENST00000567806 C16orf71Q8IYS4 520 aaPredicted RBP25.19■■□□□ 1.62
GTF3C1-207ENST00000567806 VIRMAQ69YN4 1812 aaKnown RBP25.19■■□□□ 1.62
GTF3C1-207ENST00000567806 BTBD11A6QL63 1104 aa25.18■■□□□ 1.62
GTF3C1-207ENST00000567806 H0YIN7 160 aa25.18■■□□□ 1.62
GTF3C1-207ENST00000567806 C2CD5Q86YS7 1000 aa25.18■■□□□ 1.62
GTF3C1-207ENST00000567806 ARFGEF1Q9Y6D6 1849 aa25.18■■□□□ 1.62
GTF3C1-207ENST00000567806 KDM2BQ8NHM5 1336 aa25.17■■□□□ 1.62
GTF3C1-207ENST00000567806 TTLL6Q8N841 843 aa25.17■■□□□ 1.62
GTF3C1-207ENST00000567806 RSPH6AQ9H0K4 717 aa25.17■■□□□ 1.62
GTF3C1-207ENST00000567806 U2AF1L5P0DN76 240 aaPredicted RBP25.16■■□□□ 1.62
GTF3C1-207ENST00000567806 IL6STP40189 918 aaPredicted RBP25.16■■□□□ 1.62
GTF3C1-207ENST00000567806 APLP1P51693 650 aa25.16■■□□□ 1.62
GTF3C1-207ENST00000567806 U2AF1Q01081 240 aaKnown RBP eCLIP25.16■■□□□ 1.62
GTF3C1-207ENST00000567806 TBC1D2BQ9UPU7 963 aa25.16■■□□□ 1.62
GTF3C1-207ENST00000567806 RTF1Q92541 710 aaKnown RBP25.15■■□□□ 1.62
GTF3C1-207ENST00000567806 UBR2Q8IWV8 1755 aa25.14■■□□□ 1.62
GTF3C1-207ENST00000567806 A1BGP04217 495 aa25.14■■□□□ 1.62
GTF3C1-207ENST00000567806 TBC1D9BQ66K14 1250 aa25.14■■□□□ 1.62
GTF3C1-207ENST00000567806 CEMIPQ8WUJ3 1361 aa25.14■■□□□ 1.61
GTF3C1-207ENST00000567806 KCNQ3O43525 872 aa25.13■■□□□ 1.61
GTF3C1-207ENST00000567806 PPP2R1AP30153 589 aa25.13■■□□□ 1.61
GTF3C1-207ENST00000567806 RBM46Q8TBY0 533 aaKnown RBP25.13■■□□□ 1.61
GTF3C1-207ENST00000567806 RRAGCQ9HB90 399 aa25.12■■□□□ 1.61
GTF3C1-207ENST00000567806 PDZRN3Q9UPQ7 1066 aa25.12■■□□□ 1.61
GTF3C1-207ENST00000567806 PDE6BP35913 854 aa25.11■■□□□ 1.61
GTF3C1-207ENST00000567806 RASSF7Q02833 373 aa25.11■■□□□ 1.61
GTF3C1-207ENST00000567806 ZNF622Q969S3 477 aaKnown RBP eCLIP25.11■■□□□ 1.61
GTF3C1-207ENST00000567806 SETDB2Q96T68 719 aa25.11■■□□□ 1.61
GTF3C1-207ENST00000567806 BRIP1Q9BX63 1249 aa25.11■■□□□ 1.61
GTF3C1-207ENST00000567806 AFDNP55196 1824 aaKnown RBP25.1■■□□□ 1.61
GTF3C1-207ENST00000567806 LMNB1P20700 586 aa25.1■■□□□ 1.61
GTF3C1-207ENST00000567806 NPHP1O15259 732 aa25.09■■□□□ 1.61
GTF3C1-207ENST00000567806 USP16Q9Y5T5 823 aa25.09■■□□□ 1.61
GTF3C1-207ENST00000567806 NRXN2Q9P2S2 1712 aa25.09■■□□□ 1.61
GTF3C1-207ENST00000567806 MCM10Q7L590 875 aa25.08■■□□□ 1.61
GTF3C1-207ENST00000567806 ZC3H4Q9UPT8 1303 aaKnown RBP25.08■■□□□ 1.6
GTF3C1-207ENST00000567806 CARMIL3Q8ND23 1372 aa25.07■■□□□ 1.6
GTF3C1-207ENST00000567806 CAMTA2O94983 1202 aa25.07■■□□□ 1.6
GTF3C1-207ENST00000567806 FSTL1Q12841 308 aa25.07■■□□□ 1.6
GTF3C1-207ENST00000567806 PRR5LQ6MZQ0 368 aa25.07■■□□□ 1.6
GTF3C1-207ENST00000567806 DZIP3Q86Y13 1208 aaKnown RBP25.07■■□□□ 1.6
GTF3C1-207ENST00000567806 CCDC24Q8N4L8 307 aa25.07■■□□□ 1.6
GTF3C1-207ENST00000567806 HTATSF1O43719 755 aaKnown RBP25.06■■□□□ 1.6
GTF3C1-207ENST00000567806 SNRPA1P09661 255 aaKnown RBP25.06■■□□□ 1.6
GTF3C1-207ENST00000567806 CNBD1Q8NA66 436 aa25.05■■□□□ 1.6
GTF3C1-207ENST00000567806 SIPA1L3O60292 1781 aaPredicted RBP25.05■■□□□ 1.6
GTF3C1-207ENST00000567806 NEFMP07197 916 aa25.04■■□□□ 1.6
GTF3C1-207ENST00000567806 ST5P78524 1137 aa25.04■■□□□ 1.6
GTF3C1-207ENST00000567806 GLTPD2A6NH11 291 aa25.03■■□□□ 1.6
GTF3C1-207ENST00000567806 PIP4K2AP48426 406 aaPredicted RBP25.03■■□□□ 1.6
GTF3C1-207ENST00000567806 DCTN1Q14203 1278 aa25.03■■□□□ 1.6
GTF3C1-207ENST00000567806 IFFO2Q5TF58 517 aa25.03■■□□□ 1.6
GTF3C1-207ENST00000567806 ZNF219Q9P2Y4 722 aaPredicted RBP25.03■■□□□ 1.6
GTF3C1-207ENST00000567806 SBF1O95248 1867 aa25.02■■□□□ 1.6
GTF3C1-207ENST00000567806 PRAMEF22A3QJZ6 481 aa25.02■■□□□ 1.6
GTF3C1-207ENST00000567806 C21orf2O43822 256 aa25.02■■□□□ 1.6
GTF3C1-207ENST00000567806 PRELPP51888 382 aa25.02■■□□□ 1.6
GTF3C1-207ENST00000567806 DNAJC5GQ8N7S2 189 aa25.02■■□□□ 1.6
GTF3C1-207ENST00000567806 NFKBIEO00221 500 aa25.01■■□□□ 1.59
GTF3C1-207ENST00000567806 VEGFAP15692 232 aaPredicted RBP25.01■■□□□ 1.59
GTF3C1-207ENST00000567806 TAF7Q15545 349 aaPredicted RBP25.01■■□□□ 1.59
GTF3C1-207ENST00000567806 CLEC4GQ6UXB4 293 aa25.01■■□□□ 1.59
GTF3C1-207ENST00000567806 CNKSR1Q969H4 720 aa25.01■■□□□ 1.59
GTF3C1-207ENST00000567806 ZNF652Q9Y2D9 606 aa25.01■■□□□ 1.59
GTF3C1-207ENST00000567806 DPY19L2Q6NUT2 758 aa24.99■■□□□ 1.59
GTF3C1-207ENST00000567806 SMC1BQ8NDV3 1235 aa24.99■■□□□ 1.59
GTF3C1-207ENST00000567806 DLEC1Q9Y238 1755 aa24.98■■□□□ 1.59
GTF3C1-207ENST00000567806 STYK1Q6J9G0 422 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms