RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 PARP3Q9Y6F1 533 aa14.86□□□□□ -0.03
CDH3-206ENST00000567674 KCPQ6ZWJ8 1503 aa14.86□□□□□ -0.03
CDH3-206ENST00000567674 HEG1Q9ULI3 1381 aa14.85□□□□□ -0.03
CDH3-206ENST00000567674 ZPR1O75312 459 aa14.85□□□□□ -0.03
CDH3-206ENST00000567674 TOMM70O94826 608 aa14.85□□□□□ -0.03
CDH3-206ENST00000567674 MMP10P09238 476 aa14.85□□□□□ -0.03
CDH3-206ENST00000567674 MSL1Q68DK7 614 aa14.85□□□□□ -0.03
CDH3-206ENST00000567674 DNAJC10Q8IXB1 793 aa14.85□□□□□ -0.03
CDH3-206ENST00000567674 TNS4Q8IZW8 715 aa14.85□□□□□ -0.03
CDH3-206ENST00000567674 NARFQ9UHQ1 456 aa14.85□□□□□ -0.03
CDH3-206ENST00000567674 SOS1Q07889 1333 aaPredicted RBP14.85□□□□□ -0.03
CDH3-206ENST00000567674 UBR2Q8IWV8 1755 aa14.85□□□□□ -0.03
CDH3-206ENST00000567674 BTBD11A6QL63 1104 aa14.84□□□□□ -0.03
CDH3-206ENST00000567674 SLC39A6Q13433 755 aa14.84□□□□□ -0.03
CDH3-206ENST00000567674 PLEKHF1Q96S99 279 aa14.84□□□□□ -0.03
CDH3-206ENST00000567674 BABAM1Q9NWV8 329 aa14.84□□□□□ -0.03
CDH3-206ENST00000567674 MYH14Q7Z406 1995 aaKnown RBP14.84□□□□□ -0.03
CDH3-206ENST00000567674 TJP1Q07157 1748 aa14.83□□□□□ -0.03
CDH3-206ENST00000567674 TM4SF1P30408 202 aa14.83□□□□□ -0.04
CDH3-206ENST00000567674 IL6STP40189 918 aaPredicted RBP14.83□□□□□ -0.04
CDH3-206ENST00000567674 EIF5P55010 431 aaKnown RBP14.83□□□□□ -0.04
CDH3-206ENST00000567674 TAF7Q15545 349 aaPredicted RBP14.83□□□□□ -0.04
CDH3-206ENST00000567674 JMYQ8N9B5 988 aa14.83□□□□□ -0.04
CDH3-206ENST00000567674 PDZRN3Q9UPQ7 1066 aa14.83□□□□□ -0.04
CDH3-206ENST00000567674 MYBBP1AQ9BQG0 1328 aaKnown RBP14.83□□□□□ -0.04
CDH3-206ENST00000567674 VIRMAQ69YN4 1812 aaKnown RBP14.82□□□□□ -0.04
CDH3-206ENST00000567674 CNGB1Q14028 1251 aaPredicted RBP14.82□□□□□ -0.04
CDH3-206ENST00000567674 ZNF496Q96IT1 587 aaPredicted RBP14.82□□□□□ -0.04
CDH3-206ENST00000567674 SIPA1L3O60292 1781 aaPredicted RBP14.82□□□□□ -0.04
CDH3-206ENST00000567674 SNRPA1P09661 255 aaKnown RBP14.81□□□□□ -0.04
CDH3-206ENST00000567674 NPM2Q86SE8 214 aaKnown RBP14.81□□□□□ -0.04
CDH3-206ENST00000567674 C10orf71Q711Q0 1435 aa14.81□□□□□ -0.04
CDH3-206ENST00000567674 KIF13BQ9NQT8 1826 aa14.8□□□□□ -0.04
CDH3-206ENST00000567674 LMOD3Q0VAK6 560 aa14.8□□□□□ -0.04
CDH3-206ENST00000567674 DDX10Q13206 875 aaKnown RBP14.8□□□□□ -0.04
CDH3-206ENST00000567674 NFE2L2Q16236 605 aa14.8□□□□□ -0.04
CDH3-206ENST00000567674 KLRG1Q96E93 195 aa14.8□□□□□ -0.04
CDH3-206ENST00000567674 MAPK8IP3Q9UPT6 1336 aa14.8□□□□□ -0.04
CDH3-206ENST00000567674 COL15A1P39059 1388 aa14.8□□□□□ -0.04
CDH3-206ENST00000567674 SLC34A2O95436 690 aa14.79□□□□□ -0.04
CDH3-206ENST00000567674 C4AP0C0L4 1744 aa14.79□□□□□ -0.04
CDH3-206ENST00000567674 CLEC4GQ6UXB4 293 aa14.79□□□□□ -0.04
CDH3-206ENST00000567674 ZBTB1Q9Y2K1 713 aa14.79□□□□□ -0.04
CDH3-206ENST00000567674 FKBP8Q14318 412 aa14.78□□□□□ -0.04
CDH3-206ENST00000567674 SMIM5Q71RC9 77 aa14.78□□□□□ -0.04
CDH3-206ENST00000567674 WDR90Q96KV7 1748 aa14.78□□□□□ -0.04
CDH3-206ENST00000567674 POLRMTO00411 1230 aaKnown RBP14.77□□□□□ -0.05
CDH3-206ENST00000567674 USPL1Q5W0Q7 1092 aa14.77□□□□□ -0.05
CDH3-206ENST00000567674 MCM10Q7L590 875 aa14.76□□□□□ -0.05
CDH3-206ENST00000567674 PRKRIP1Q9H875 184 aaPredicted RBP14.75□□□□□ -0.05
CDH3-206ENST00000567674 PIM2Q9P1W9 311 aa14.75□□□□□ -0.05
CDH3-206ENST00000567674 SRP68Q9UHB9 627 aaKnown RBP14.75□□□□□ -0.05
CDH3-206ENST00000567674 PXDNLA1KZ92 1463 aa14.75□□□□□ -0.05
CDH3-206ENST00000567674 ERBB4Q15303 1308 aa14.74□□□□□ -0.05
CDH3-206ENST00000567674 CANXP27824 592 aaKnown RBP14.74□□□□□ -0.05
CDH3-206ENST00000567674 RBM46Q8TBY0 533 aaKnown RBP14.74□□□□□ -0.05
CDH3-206ENST00000567674 BCL2L12Q9HB09 334 aa14.74□□□□□ -0.05
CDH3-206ENST00000567674 ZNF652Q9Y2D9 606 aa14.74□□□□□ -0.05
CDH3-206ENST00000567674 DDR1Q08345 913 aa14.73□□□□□ -0.05
CDH3-206ENST00000567674 NFIXQ14938 502 aa14.73□□□□□ -0.05
CDH3-206ENST00000567674 USP16Q9Y5T5 823 aa14.73□□□□□ -0.05
CDH3-206ENST00000567674 SERPINB2P05120 415 aa14.72□□□□□ -0.05
CDH3-206ENST00000567674 KCNA3P22001 575 aa14.72□□□□□ -0.05
CDH3-206ENST00000567674 FSTL1Q12841 308 aa14.72□□□□□ -0.05
CDH3-206ENST00000567674 WDR43Q15061 677 aaKnown RBP eCLIP14.72□□□□□ -0.05
CDH3-206ENST00000567674 RUNDC1Q96C34 613 aa14.72□□□□□ -0.05
CDH3-206ENST00000567674 NRXN2Q9P2S2 1712 aa14.72□□□□□ -0.05
CDH3-206ENST00000567674 CARMIL3Q8ND23 1372 aa14.72□□□□□ -0.05
CDH3-206ENST00000567674 A1BGP04217 495 aa14.71□□□□□ -0.05
CDH3-206ENST00000567674 TMPOP42166 694 aaKnown RBP14.71□□□□□ -0.05
CDH3-206ENST00000567674 RIPK4P57078 832 aa14.71□□□□□ -0.05
CDH3-206ENST00000567674 EIF4A1P60842 406 aaKnown RBP14.71□□□□□ -0.05
CDH3-206ENST00000567674 SETDB2Q96T68 719 aa14.71□□□□□ -0.05
CDH3-206ENST00000567674 BRIP1Q9BX63 1249 aa14.71□□□□□ -0.05
CDH3-206ENST00000567674 WWC3Q9ULE0 1092 aa14.71□□□□□ -0.05
CDH3-206ENST00000567674 A0A0G2JLW4 131 aa14.7□□□□□ -0.06
CDH3-206ENST00000567674 ERVV-1B6SEH8 477 aa14.7□□□□□ -0.06
CDH3-206ENST00000567674 KCNQ3O43525 872 aa14.7□□□□□ -0.06
CDH3-206ENST00000567674 CAMTA2O94983 1202 aa14.7□□□□□ -0.06
CDH3-206ENST00000567674 DPEP1P16444 411 aa14.7□□□□□ -0.06
CDH3-206ENST00000567674 PDE6BP35913 854 aa14.7□□□□□ -0.06
CDH3-206ENST00000567674 DCTN1Q14203 1278 aa14.7□□□□□ -0.06
CDH3-206ENST00000567674 NCBP3Q53F19 620 aaKnown RBP14.7□□□□□ -0.06
CDH3-206ENST00000567674 DALRD3Q5D0E6 543 aaKnown RBP14.7□□□□□ -0.06
CDH3-206ENST00000567674 DZIP3Q86Y13 1208 aaKnown RBP14.7□□□□□ -0.06
CDH3-206ENST00000567674 KIAA1551Q9HCM1 1747 aa14.69□□□□□ -0.06
CDH3-206ENST00000567674 HTRA3P83110 453 aa14.69□□□□□ -0.06
CDH3-206ENST00000567674 C16orf71Q8IYS4 520 aaPredicted RBP14.69□□□□□ -0.06
CDH3-206ENST00000567674 CHMP4AQ9BY43 222 aa14.69□□□□□ -0.06
CDH3-206ENST00000567674 NMRK2Q9NPI5 230 aa14.69□□□□□ -0.06
CDH3-206ENST00000567674 ZC3H4Q9UPT8 1303 aaKnown RBP14.68□□□□□ -0.06
CDH3-206ENST00000567674 PCNTO95613 3336 aa14.67□□□□□ -0.06
CDH3-206ENST00000567674 H0YIN7 160 aa14.67□□□□□ -0.06
CDH3-206ENST00000567674 HOXB7P09629 217 aa14.67□□□□□ -0.06
CDH3-206ENST00000567674 CALD1Q05682 793 aaKnown RBP14.67□□□□□ -0.06
CDH3-206ENST00000567674 PCDH10Q9P2E7 1040 aa14.67□□□□□ -0.06
CDH3-206ENST00000567674 TBC1D2BQ9UPU7 963 aa14.67□□□□□ -0.06
CDH3-206ENST00000567674 BCS1LQ9Y276 419 aa14.67□□□□□ -0.06
CDH3-206ENST00000567674 DLG5Q8TDM6 1919 aa14.66□□□□□ -0.06
CDH3-206ENST00000567674 BRCA1P38398 1863 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms