RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 ZBTB1Q9Y2K1 713 aa20.19■□□□□ 0.82
SCAMP2-209ENST00000567638 CEMIPQ8WUJ3 1361 aa20.19■□□□□ 0.82
SCAMP2-209ENST00000567638 ZPR1O75312 459 aa20.18■□□□□ 0.82
SCAMP2-209ENST00000567638 PHACTR3Q96KR7 559 aa20.18■□□□□ 0.82
SCAMP2-209ENST00000567638 SCN7AQ01118 1682 aa20.18■□□□□ 0.82
SCAMP2-209ENST00000567638 DPEP1P16444 411 aa20.17■□□□□ 0.82
SCAMP2-209ENST00000567638 USPL1Q5W0Q7 1092 aa20.17■□□□□ 0.82
SCAMP2-209ENST00000567638 DLEC1Q9Y238 1755 aa20.16■□□□□ 0.82
SCAMP2-209ENST00000567638 DLG5Q8TDM6 1919 aa20.16■□□□□ 0.82
SCAMP2-209ENST00000567638 ZNF790Q6PG37 636 aa20.16■□□□□ 0.82
SCAMP2-209ENST00000567638 NARFQ9UHQ1 456 aa20.16■□□□□ 0.82
SCAMP2-209ENST00000567638 BCS1LQ9Y276 419 aa20.16■□□□□ 0.82
SCAMP2-209ENST00000567638 HEG1Q9ULI3 1381 aa20.16■□□□□ 0.82
SCAMP2-209ENST00000567638 POLRMTO00411 1230 aaKnown RBP20.15■□□□□ 0.82
SCAMP2-209ENST00000567638 U2AF1L5P0DN76 240 aaPredicted RBP20.15■□□□□ 0.82
SCAMP2-209ENST00000567638 TM4SF1P30408 202 aa20.15■□□□□ 0.82
SCAMP2-209ENST00000567638 U2AF1Q01081 240 aaKnown RBP eCLIP20.15■□□□□ 0.82
SCAMP2-209ENST00000567638 ZNF496Q96IT1 587 aaPredicted RBP20.15■□□□□ 0.82
SCAMP2-209ENST00000567638 STARD3NLO95772 234 aa20.13■□□□□ 0.81
SCAMP2-209ENST00000567638 KCNA3P22001 575 aa20.13■□□□□ 0.81
SCAMP2-209ENST00000567638 CANXP27824 592 aaKnown RBP20.13■□□□□ 0.81
SCAMP2-209ENST00000567638 BCORQ6W2J9 1755 aa20.13■□□□□ 0.81
SCAMP2-209ENST00000567638 FCHSD2O94868 740 aa20.12■□□□□ 0.81
SCAMP2-209ENST00000567638 GPBP1L1Q9HC44 474 aaPredicted RBP20.12■□□□□ 0.81
SCAMP2-209ENST00000567638 SENP3-EIF4A1A0A087X0R7 540 aa20.11■□□□□ 0.81
SCAMP2-209ENST00000567638 EIF5P55010 431 aaKnown RBP20.11■□□□□ 0.81
SCAMP2-209ENST00000567638 NFIXQ14938 502 aa20.11■□□□□ 0.81
SCAMP2-209ENST00000567638 FMNL2Q96PY5 1086 aa20.11■□□□□ 0.81
SCAMP2-209ENST00000567638 TEX13AQ9BXU3 409 aaPredicted RBP20.11■□□□□ 0.81
SCAMP2-209ENST00000567638 BCL2L12Q9HB09 334 aa20.11■□□□□ 0.81
SCAMP2-209ENST00000567638 SBF1O95248 1867 aa20.1■□□□□ 0.81
SCAMP2-209ENST00000567638 ZNF526Q8TF50 670 aaPredicted RBP20.1■□□□□ 0.81
SCAMP2-209ENST00000567638 PIM2Q9P1W9 311 aa20.1■□□□□ 0.81
SCAMP2-209ENST00000567638 ANKRD31Q8N7Z5 1873 aa20.09■□□□□ 0.81
SCAMP2-209ENST00000567638 BTBD11A6QL63 1104 aa20.09■□□□□ 0.81
SCAMP2-209ENST00000567638 A0A087WZG4 1122 aa20.08■□□□□ 0.81
SCAMP2-209ENST00000567638 CHRNA5P30532 468 aa20.08■□□□□ 0.81
SCAMP2-209ENST00000567638 ARHGAP27Q6ZUM4 889 aa20.08■□□□□ 0.81
SCAMP2-209ENST00000567638 RTF1Q92541 710 aaKnown RBP20.08■□□□□ 0.81
SCAMP2-209ENST00000567638 LAMB4A4D0S4 1761 aa20.08■□□□□ 0.8
SCAMP2-209ENST00000567638 KCNQ3O43525 872 aa20.07■□□□□ 0.8
SCAMP2-209ENST00000567638 MCM10Q7L590 875 aa20.07■□□□□ 0.8
SCAMP2-209ENST00000567638 KDM3BQ7LBC6 1761 aa20.06■□□□□ 0.8
SCAMP2-209ENST00000567638 SERPINB2P05120 415 aa20.06■□□□□ 0.8
SCAMP2-209ENST00000567638 IL6STP40189 918 aaPredicted RBP20.06■□□□□ 0.8
SCAMP2-209ENST00000567638 DALRD3Q5D0E6 543 aaKnown RBP20.06■□□□□ 0.8
SCAMP2-209ENST00000567638 HTATSF1O43719 755 aaKnown RBP20.05■□□□□ 0.8
SCAMP2-209ENST00000567638 ZNF330Q9Y3S2 320 aaPredicted RBP20.05■□□□□ 0.8
SCAMP2-209ENST00000567638 A1BGP04217 495 aa20.04■□□□□ 0.8
SCAMP2-209ENST00000567638 CARMIL3Q8ND23 1372 aa20.04■□□□□ 0.8
SCAMP2-209ENST00000567638 COL11A2P13942 1736 aaPredicted RBP20.04■□□□□ 0.8
SCAMP2-209ENST00000567638 DCTN1Q14203 1278 aa20.03■□□□□ 0.8
SCAMP2-209ENST00000567638 CCDC88AQ3V6T2 1871 aa20.03■□□□□ 0.8
SCAMP2-209ENST00000567638 TBC1D9BQ66K14 1250 aa20.02■□□□□ 0.8
SCAMP2-209ENST00000567638 BICDL1Q6ZP65 573 aa20.02■□□□□ 0.8
SCAMP2-209ENST00000567638 TBC1D2BQ9UPU7 963 aa20.02■□□□□ 0.8
SCAMP2-209ENST00000567638 USP16Q9Y5T5 823 aa20.02■□□□□ 0.8
SCAMP2-209ENST00000567638 CACNA1SQ13698 1873 aa20.02■□□□□ 0.8
SCAMP2-209ENST00000567638 NEFMP07197 916 aa20.01■□□□□ 0.79
SCAMP2-209ENST00000567638 NPM2Q86SE8 214 aaKnown RBP20.01■□□□□ 0.79
SCAMP2-209ENST00000567638 PRAMEF22A3QJZ6 481 aa20■□□□□ 0.79
SCAMP2-209ENST00000567638 SNRPA1P09661 255 aaKnown RBP20■□□□□ 0.79
SCAMP2-209ENST00000567638 ARFGEF2Q9Y6D5 1785 aa19.99■□□□□ 0.79
SCAMP2-209ENST00000567638 KIF3CO14782 793 aa19.99■□□□□ 0.79
SCAMP2-209ENST00000567638 CAMTA2O94983 1202 aa19.99■□□□□ 0.79
SCAMP2-209ENST00000567638 C9orf131Q5VYM1 1079 aa19.99■□□□□ 0.79
SCAMP2-209ENST00000567638 TAF7Q15545 349 aaPredicted RBP19.98■□□□□ 0.79
SCAMP2-209ENST00000567638 DZIP3Q86Y13 1208 aaKnown RBP19.98■□□□□ 0.79
SCAMP2-209ENST00000567638 C2CD5Q86YS7 1000 aa19.98■□□□□ 0.79
SCAMP2-209ENST00000567638 PLEKHF1Q96S99 279 aa19.98■□□□□ 0.79
SCAMP2-209ENST00000567638 TIAM2Q8IVF5 1701 aa19.98■□□□□ 0.79
SCAMP2-209ENST00000567638 TNRC6CQ9HCJ0 1690 aaKnown RBP19.97■□□□□ 0.79
SCAMP2-209ENST00000567638 PIP4K2AP48426 406 aaPredicted RBP19.97■□□□□ 0.79
SCAMP2-209ENST00000567638 H0YIN7 160 aa19.96■□□□□ 0.79
SCAMP2-209ENST00000567638 PRR5LQ6MZQ0 368 aa19.96■□□□□ 0.79
SCAMP2-209ENST00000567638 TTLL6Q8N841 843 aa19.96■□□□□ 0.79
SCAMP2-209ENST00000567638 FER1L6Q2WGJ9 1857 aa19.96■□□□□ 0.79
SCAMP2-209ENST00000567638 NFE2L2Q16236 605 aa19.95■□□□□ 0.78
SCAMP2-209ENST00000567638 SETDB2Q96T68 719 aa19.95■□□□□ 0.78
SCAMP2-209ENST00000567638 BRIP1Q9BX63 1249 aa19.95■□□□□ 0.78
SCAMP2-209ENST00000567638 RNF181Q9P0P0 153 aa19.95■□□□□ 0.78
SCAMP2-209ENST00000567638 DICER1Q9UPY3 1922 aaKnown RBP19.94■□□□□ 0.78
SCAMP2-209ENST00000567638 PNNQ9H307 717 aaKnown RBP19.94■□□□□ 0.78
SCAMP2-209ENST00000567638 PDZRN3Q9UPQ7 1066 aa19.94■□□□□ 0.78
SCAMP2-209ENST00000567638 NUP98P52948 1817 aa19.94■□□□□ 0.78
SCAMP2-209ENST00000567638 MAPK8IP3Q9UPT6 1336 aa19.94■□□□□ 0.78
SCAMP2-209ENST00000567638 NBPF26B4DH59 902 aa19.93■□□□□ 0.78
SCAMP2-209ENST00000567638 PDE6BP35913 854 aa19.93■□□□□ 0.78
SCAMP2-209ENST00000567638 RASSF7Q02833 373 aa19.93■□□□□ 0.78
SCAMP2-209ENST00000567638 RALBP1Q15311 655 aa19.93■□□□□ 0.78
SCAMP2-209ENST00000567638 NBPF10Q6P3W6 841 aaKnown RBP19.93■□□□□ 0.78
SCAMP2-209ENST00000567638 NBPF15Q8N660 670 aa19.93■□□□□ 0.78
SCAMP2-209ENST00000567638 CNBD1Q8NA66 436 aa19.93■□□□□ 0.78
SCAMP2-209ENST00000567638 PNISRQ8TF01 805 aaKnown RBP19.93■□□□□ 0.78
SCAMP2-209ENST00000567638 NMRK2Q9NPI5 230 aa19.93■□□□□ 0.78
SCAMP2-209ENST00000567638 MIS18AQ9NYP9 233 aa19.93■□□□□ 0.78
SCAMP2-209ENST00000567638 SLX4Q8IY92 1834 aa19.92■□□□□ 0.78
SCAMP2-209ENST00000567638 HSPA6P17066 643 aa19.92■□□□□ 0.78
SCAMP2-209ENST00000567638 CLEC4GQ6UXB4 293 aa19.92■□□□□ 0.78
SCAMP2-209ENST00000567638 CCDC24Q8N4L8 307 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms