RNA–Protein interactions for RNA: ENST00000566882.5

CCNDBP1-210, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-210ENST00000566882 C5P01031 1676 aa12.6□□□□□ -0.39
CCNDBP1-210ENST00000566882 HOXB7P09629 217 aa12.6□□□□□ -0.39
CCNDBP1-210ENST00000566882 ZNF790Q6PG37 636 aa12.6□□□□□ -0.39
CCNDBP1-210ENST00000566882 MAP3K2Q9Y2U5 619 aa12.6□□□□□ -0.39
CCNDBP1-210ENST00000566882 BECN1Q14457 450 aa12.59□□□□□ -0.39
CCNDBP1-210ENST00000566882 PDIA6Q15084 440 aa12.59□□□□□ -0.39
CCNDBP1-210ENST00000566882 PPP1R42Q7Z4L9 355 aa12.59□□□□□ -0.39
CCNDBP1-210ENST00000566882 IL1RAPL2Q9NP60 686 aa12.59□□□□□ -0.39
CCNDBP1-210ENST00000566882 DBF4Q9UBU7 674 aaPredicted RBP12.59□□□□□ -0.39
CCNDBP1-210ENST00000566882 CDC45O75419 566 aa12.59□□□□□ -0.39
CCNDBP1-210ENST00000566882 CD2BP2O95400 341 aaKnown RBP12.59□□□□□ -0.39
CCNDBP1-210ENST00000566882 MYL6BP14649 208 aa12.59□□□□□ -0.39
CCNDBP1-210ENST00000566882 ZNF496Q96IT1 587 aaPredicted RBP12.59□□□□□ -0.39
CCNDBP1-210ENST00000566882 PRDM11Q9NQV5 511 aa12.59□□□□□ -0.39
CCNDBP1-210ENST00000566882 PXDNLA1KZ92 1463 aa12.58□□□□□ -0.4
CCNDBP1-210ENST00000566882 RBM25P49756 843 aaKnown RBP12.58□□□□□ -0.4
CCNDBP1-210ENST00000566882 ANTXR1Q9H6X2 564 aa12.58□□□□□ -0.4
CCNDBP1-210ENST00000566882 SPG7Q9UQ90 795 aa12.58□□□□□ -0.4
CCNDBP1-210ENST00000566882 PDE1AP54750 535 aa12.58□□□□□ -0.4
CCNDBP1-210ENST00000566882 OVOS2A0A0G2JMS6 1433 aa12.58□□□□□ -0.4
CCNDBP1-210ENST00000566882 IFNL2Q8IZJ0 200 aa12.57□□□□□ -0.4
CCNDBP1-210ENST00000566882 USP16Q9Y5T5 823 aa12.57□□□□□ -0.4
CCNDBP1-210ENST00000566882 SOS2Q07890 1332 aaPredicted RBP12.57□□□□□ -0.4
CCNDBP1-210ENST00000566882 LRRCC1Q9C099 1032 aa12.57□□□□□ -0.4
CCNDBP1-210ENST00000566882 USP35Q9P2H5 1018 aa12.57□□□□□ -0.4
CCNDBP1-210ENST00000566882 SALL3Q9BXA9 1300 aa12.57□□□□□ -0.4
CCNDBP1-210ENST00000566882 CPDO75976 1380 aa12.56□□□□□ -0.4
CCNDBP1-210ENST00000566882 IBTKQ9P2D0 1353 aaPredicted RBP12.56□□□□□ -0.4
CCNDBP1-210ENST00000566882 TOM1L2Q6ZVM7 507 aa12.56□□□□□ -0.4
CCNDBP1-210ENST00000566882 STRN4Q9NRL3 753 aa12.56□□□□□ -0.4
CCNDBP1-210ENST00000566882 SRGAP3O43295 1099 aa12.56□□□□□ -0.4
CCNDBP1-210ENST00000566882 NUTM1Q86Y26 1132 aa12.56□□□□□ -0.4
CCNDBP1-210ENST00000566882 IL27Q8NEV9 243 aa12.56□□□□□ -0.4
CCNDBP1-210ENST00000566882 SSH3Q8TE77 659 aa12.56□□□□□ -0.4
CCNDBP1-210ENST00000566882 JARID2Q92833 1246 aaPredicted RBP12.55□□□□□ -0.4
CCNDBP1-210ENST00000566882 SURF6O75683 361 aaKnown RBP12.55□□□□□ -0.4
CCNDBP1-210ENST00000566882 KSR2Q6VAB6 950 aa12.55□□□□□ -0.4
CCNDBP1-210ENST00000566882 UNC5CLQ8IV45 518 aa12.55□□□□□ -0.4
CCNDBP1-210ENST00000566882 LARP1Q6PKG0 1096 aaKnown RBP12.54□□□□□ -0.4
CCNDBP1-210ENST00000566882 PKD1L3Q7Z443 1732 aa12.54□□□□□ -0.4
CCNDBP1-210ENST00000566882 POLA2Q14181 598 aa12.54□□□□□ -0.4
CCNDBP1-210ENST00000566882 DDX21Q9NR30 783 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCNDBP1-210ENST00000566882 MAP4K4O95819 1239 aaPredicted RBP12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 MX1P20591 662 aa12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 XAGE3Q8WTP9 111 aa12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 DCAF5Q96JK2 942 aa12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 PA2G4Q9UQ80 394 aaKnown RBP12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 WDR17Q8IZU2 1322 aa12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 IGKV5-2P06315 115 aa12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 COPS6Q7L5N1 327 aa12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 DDX54Q8TDD1 881 aaKnown RBP12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 KAZALD1Q96I82 304 aa12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 FOXD4L1Q9NU39 408 aa12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 COL5A2P05997 1499 aaPredicted RBP12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 PDIA4P13667 645 aaKnown RBP12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 CABP4P57796 275 aa12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 OSBPL3Q9H4L5 887 aa12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 HYPKQ9NX55 129 aa12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 C9orf78Q9NZ63 289 aaPredicted RBP12.53□□□□□ -0.4
CCNDBP1-210ENST00000566882 TUBGCP6Q96RT7 1819 aa12.52□□□□□ -0.4
CCNDBP1-210ENST00000566882 ABCA3Q99758 1704 aa12.52□□□□□ -0.4
CCNDBP1-210ENST00000566882 USP26Q9BXU7 913 aa12.52□□□□□ -0.41
CCNDBP1-210ENST00000566882 GSE1Q14687 1217 aa12.52□□□□□ -0.41
CCNDBP1-210ENST00000566882 LRP10Q7Z4F1 713 aa12.52□□□□□ -0.41
CCNDBP1-210ENST00000566882 SUCLG2Q96I99 432 aa12.52□□□□□ -0.41
CCNDBP1-210ENST00000566882 TTC5Q8N0Z6 440 aa12.51□□□□□ -0.41
CCNDBP1-210ENST00000566882 ZCRB1Q8TBF4 217 aaKnown RBP12.51□□□□□ -0.41
CCNDBP1-210ENST00000566882 RHPN1Q8TCX5 695 aa12.51□□□□□ -0.41
CCNDBP1-210ENST00000566882 RILPL2Q969X0 211 aa12.51□□□□□ -0.41
CCNDBP1-210ENST00000566882 IL25Q9H293 177 aa12.51□□□□□ -0.41
CCNDBP1-210ENST00000566882 RIC3Q7Z5B4 369 aa12.51□□□□□ -0.41
CCNDBP1-210ENST00000566882 HSCBQ8IWL3 235 aa12.51□□□□□ -0.41
CCNDBP1-210ENST00000566882 TRIM6-TRIM34B2RNG4 842 aa12.5□□□□□ -0.41
CCNDBP1-210ENST00000566882 KLHDC4Q8TBB5 520 aa12.5□□□□□ -0.41
CCNDBP1-210ENST00000566882 GLI3P10071 1580 aa12.5□□□□□ -0.41
CCNDBP1-210ENST00000566882 MRC1P22897 1456 aa12.5□□□□□ -0.41
CCNDBP1-210ENST00000566882 MYD88Q99836 296 aa12.5□□□□□ -0.41
CCNDBP1-210ENST00000566882 BRPF3Q9ULD4 1205 aa12.5□□□□□ -0.41
CCNDBP1-210ENST00000566882 SNRPA1P09661 255 aaKnown RBP12.49□□□□□ -0.41
CCNDBP1-210ENST00000566882 EPHA10Q5JZY3 1008 aa12.49□□□□□ -0.41
CCNDBP1-210ENST00000566882 LINS1Q8NG48 757 aa12.49□□□□□ -0.41
CCNDBP1-210ENST00000566882 BICC1Q9H694 974 aaKnown RBP12.49□□□□□ -0.41
CCNDBP1-210ENST00000566882 ABCC6O95255 1503 aa12.49□□□□□ -0.41
CCNDBP1-210ENST00000566882 ATP5J2-PTCD1G3V325 749 aa12.49□□□□□ -0.41
CCNDBP1-210ENST00000566882 GRM8O00222 908 aa12.49□□□□□ -0.41
CCNDBP1-210ENST00000566882 PTCD1O75127 700 aaKnown RBP12.49□□□□□ -0.41
CCNDBP1-210ENST00000566882 ALDH1L1O75891 902 aa12.49□□□□□ -0.41
CCNDBP1-210ENST00000566882 EVA1CP58658 441 aa12.49□□□□□ -0.41
CCNDBP1-210ENST00000566882 FMNL2Q96PY5 1086 aa12.49□□□□□ -0.41
CCNDBP1-210ENST00000566882 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
CCNDBP1-210ENST00000566882 NBPF14Q5TI25 921 aa12.48□□□□□ -0.41
CCNDBP1-210ENST00000566882 NBPF10Q6P3W6 841 aaKnown RBP12.48□□□□□ -0.41
CCNDBP1-210ENST00000566882 NBPF15Q8N660 670 aa12.48□□□□□ -0.41
CCNDBP1-210ENST00000566882 SHANK3Q9BYB0 1731 aa12.48□□□□□ -0.41
CCNDBP1-210ENST00000566882 PDE4CQ08493 712 aa12.48□□□□□ -0.41
CCNDBP1-210ENST00000566882 SNX21Q969T3 373 aa12.48□□□□□ -0.41
CCNDBP1-210ENST00000566882 STAP2Q9UGK3 403 aa12.48□□□□□ -0.41
CCNDBP1-210ENST00000566882 NEURL1BA8MQ27 555 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms