RNA–Protein interactions for RNA: ENST00000566784.5

PKD1-231, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 493 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-231	ENST00000566784	ZBTB1	Q9Y2K1	713 aa		18.36	■□□□□ 0.53
PKD1-231	ENST00000566784	KIAA1551	Q9HCM1	1747 aa		18.35	■□□□□ 0.53
PKD1-231	ENST00000566784	MAPK8IP3	Q9UPT6	1336 aa		18.35	■□□□□ 0.53
PKD1-231	ENST00000566784	DCTN1	Q14203	1278 aa		18.35	■□□□□ 0.53
PKD1-231	ENST00000566784	NFE2L2	Q16236	605 aa		18.35	■□□□□ 0.53
PKD1-231	ENST00000566784	SRP68	Q9UHB9	627 aa	Known RBP	18.35	■□□□□ 0.53
PKD1-231	ENST00000566784	KDM3B	Q7LBC6	1761 aa		18.35	■□□□□ 0.53
PKD1-231	ENST00000566784	KCNQ3	O43525	872 aa		18.34	■□□□□ 0.53
PKD1-231	ENST00000566784	ZPR1	O75312	459 aa		18.34	■□□□□ 0.53
PKD1-231	ENST00000566784	PRKRIP1	Q9H875	184 aa	Predicted RBP	18.34	■□□□□ 0.53
PKD1-231	ENST00000566784	C10orf71	Q711Q0	1435 aa		18.33	■□□□□ 0.53
PKD1-231	ENST00000566784	FKBP8	Q14318	412 aa		18.33	■□□□□ 0.52
PKD1-231	ENST00000566784	TAF7	Q15545	349 aa	Predicted RBP	18.33	■□□□□ 0.52
PKD1-231	ENST00000566784	PELP1	Q8IZL8	1130 aa	Known RBP	18.33	■□□□□ 0.52
PKD1-231	ENST00000566784	NARF	Q9UHQ1	456 aa		18.33	■□□□□ 0.52
PKD1-231	ENST00000566784	PARP3	Q9Y6F1	533 aa		18.33	■□□□□ 0.52
PKD1-231	ENST00000566784	N4BP2	Q86UW6	1770 aa	Predicted RBP	18.32	■□□□□ 0.52
PKD1-231	ENST00000566784	YBX3	P16989	372 aa	Known RBP eCLIP	18.32	■□□□□ 0.52
PKD1-231	ENST00000566784	SCN7A	Q01118	1682 aa		18.31	■□□□□ 0.52
PKD1-231	ENST00000566784	BRCA1	P38398	1863 aa	Known RBP	18.31	■□□□□ 0.52
PKD1-231	ENST00000566784	AFDN	P55196	1824 aa	Known RBP	18.31	■□□□□ 0.52
PKD1-231	ENST00000566784		A0A087WZG4	1122 aa		18.31	■□□□□ 0.52
PKD1-231	ENST00000566784	GRIN3B	O60391	1043 aa		18.31	■□□□□ 0.52
PKD1-231	ENST00000566784	CANX	P27824	592 aa	Known RBP	18.31	■□□□□ 0.52
PKD1-231	ENST00000566784	EIF5	P55010	431 aa	Known RBP	18.31	■□□□□ 0.52
PKD1-231	ENST00000566784	USPL1	Q5W0Q7	1092 aa		18.31	■□□□□ 0.52
PKD1-231	ENST00000566784	LAMB4	A4D0S4	1761 aa		18.31	■□□□□ 0.52
PKD1-231	ENST00000566784	NRXN2	Q9P2S2	1712 aa		18.3	■□□□□ 0.52
PKD1-231	ENST00000566784	TM4SF1	P30408	202 aa		18.3	■□□□□ 0.52
PKD1-231	ENST00000566784	PXDNL	A1KZ92	1463 aa		18.3	■□□□□ 0.52
PKD1-231	ENST00000566784	SNRPA1	P09661	255 aa	Known RBP	18.29	■□□□□ 0.52
PKD1-231	ENST00000566784	IL6ST	P40189	918 aa	Predicted RBP	18.29	■□□□□ 0.52
PKD1-231	ENST00000566784	TGFB2	P61812	414 aa		18.29	■□□□□ 0.52
PKD1-231	ENST00000566784	DDR1	Q08345	913 aa		18.29	■□□□□ 0.52
PKD1-231	ENST00000566784	PNISR	Q8TF01	805 aa	Known RBP	18.29	■□□□□ 0.52
PKD1-231	ENST00000566784	BCOR	Q6W2J9	1755 aa		18.29	■□□□□ 0.52
PKD1-231	ENST00000566784	POLRMT	O00411	1230 aa	Known RBP	18.27	■□□□□ 0.52
PKD1-231	ENST00000566784	A1BG	P04217	495 aa		18.27	■□□□□ 0.52
PKD1-231	ENST00000566784	WDR43	Q15061	677 aa	Known RBP eCLIP	18.27	■□□□□ 0.52
PKD1-231	ENST00000566784	BCL2L12	Q9HB09	334 aa		18.27	■□□□□ 0.52
PKD1-231	ENST00000566784	USP16	Q9Y5T5	823 aa		18.27	■□□□□ 0.52
PKD1-231	ENST00000566784	PRAMEF22	A3QJZ6	481 aa		18.25	■□□□□ 0.51
PKD1-231	ENST00000566784	TMPO	P42166	694 aa	Known RBP	18.25	■□□□□ 0.51
PKD1-231	ENST00000566784	RIPK4	P57078	832 aa		18.25	■□□□□ 0.51
PKD1-231	ENST00000566784	NFIX	Q14938	502 aa		18.25	■□□□□ 0.51
PKD1-231	ENST00000566784	THUMPD2	Q9BTF0	503 aa	Known RBP	18.25	■□□□□ 0.51
PKD1-231	ENST00000566784	MIS18A	Q9NYP9	233 aa		18.25	■□□□□ 0.51
PKD1-231	ENST00000566784	ARFGEF1	Q9Y6D6	1849 aa		18.25	■□□□□ 0.51
PKD1-231	ENST00000566784	LMOD3	Q0VAK6	560 aa		18.24	■□□□□ 0.51
PKD1-231	ENST00000566784	NPM2	Q86SE8	214 aa	Known RBP	18.24	■□□□□ 0.51
PKD1-231	ENST00000566784	RUNDC1	Q96C34	613 aa		18.24	■□□□□ 0.51
PKD1-231	ENST00000566784	ZNF316	A6NFI3	1004 aa	Predicted RBP	18.23	■□□□□ 0.51
PKD1-231	ENST00000566784	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.23	■□□□□ 0.51
PKD1-231	ENST00000566784		A0A0G2JLW4	131 aa		18.22	■□□□□ 0.51
PKD1-231	ENST00000566784	DPEP1	P16444	411 aa		18.22	■□□□□ 0.51
PKD1-231	ENST00000566784	EIF4A1	P60842	406 aa	Known RBP	18.22	■□□□□ 0.51
PKD1-231	ENST00000566784	CCDC146	Q8IYE0	955 aa		18.22	■□□□□ 0.51
PKD1-231	ENST00000566784	BABAM1	Q9NWV8	329 aa		18.22	■□□□□ 0.51
PKD1-231	ENST00000566784	ADAMTS8	Q9UP79	889 aa		18.22	■□□□□ 0.51
PKD1-231	ENST00000566784	TBC1D2B	Q9UPU7	963 aa		18.22	■□□□□ 0.51
PKD1-231	ENST00000566784	DLEC1	Q9Y238	1755 aa		18.22	■□□□□ 0.51
PKD1-231	ENST00000566784	GIGYF1	O75420	1035 aa	Predicted RBP	18.21	■□□□□ 0.51
PKD1-231	ENST00000566784	CAMTA2	O94983	1202 aa		18.21	■□□□□ 0.51
PKD1-231	ENST00000566784	ZNF784	Q8NCA9	323 aa	Predicted RBP	18.21	■□□□□ 0.51
PKD1-231	ENST00000566784	SERPINB2	P05120	415 aa		18.2	■□□□□ 0.5
PKD1-231	ENST00000566784	DZIP3	Q86Y13	1208 aa	Known RBP	18.2	■□□□□ 0.5
PKD1-231	ENST00000566784	WWC3	Q9ULE0	1092 aa		18.2	■□□□□ 0.5
PKD1-231	ENST00000566784	NBPF26	B4DH59	902 aa		18.19	■□□□□ 0.5
PKD1-231	ENST00000566784	KCNA3	P22001	575 aa		18.19	■□□□□ 0.5
PKD1-231	ENST00000566784	PIP4K2A	P48426	406 aa	Predicted RBP	18.19	■□□□□ 0.5
PKD1-231	ENST00000566784	TBC1D9B	Q66K14	1250 aa		18.19	■□□□□ 0.5
PKD1-231	ENST00000566784	NBPF10	Q6P3W6	841 aa	Known RBP	18.19	■□□□□ 0.5
PKD1-231	ENST00000566784	NBPF15	Q8N660	670 aa		18.19	■□□□□ 0.5
PKD1-231	ENST00000566784	ANKRD31	Q8N7Z5	1873 aa		18.19	■□□□□ 0.5
PKD1-231	ENST00000566784	CARMIL3	Q8ND23	1372 aa		18.18	■□□□□ 0.5
PKD1-231	ENST00000566784	RGL2	O15211	777 aa		18.18	■□□□□ 0.5
PKD1-231	ENST00000566784	CLEC4G	Q6UXB4	293 aa		18.18	■□□□□ 0.5
PKD1-231	ENST00000566784	TSPYL4	Q9UJ04	414 aa		18.18	■□□□□ 0.5
PKD1-231	ENST00000566784	RRP7A	Q9Y3A4	280 aa	Known RBP	18.18	■□□□□ 0.5
PKD1-231	ENST00000566784	NEUROD2	Q15784	382 aa		18.17	■□□□□ 0.5
PKD1-231	ENST00000566784	BICDL1	Q6ZP65	573 aa		18.17	■□□□□ 0.5
PKD1-231	ENST00000566784	PIM2	Q9P1W9	311 aa		18.17	■□□□□ 0.5
PKD1-231	ENST00000566784	TRIM35	Q9UPQ4	493 aa		18.17	■□□□□ 0.5
PKD1-231	ENST00000566784	BCS1L	Q9Y276	419 aa		18.17	■□□□□ 0.5
PKD1-231	ENST00000566784	NUP98	P52948	1817 aa		18.16	■□□□□ 0.5
PKD1-231	ENST00000566784	CHRNA5	P30532	468 aa		18.15	■□□□□ 0.5
PKD1-231	ENST00000566784	SETDB2	Q96T68	719 aa		18.15	■□□□□ 0.5
PKD1-231	ENST00000566784	ZNF652	Q9Y2D9	606 aa		18.15	■□□□□ 0.5
PKD1-231	ENST00000566784	ERBB4	Q15303	1308 aa		18.15	■□□□□ 0.5
PKD1-231	ENST00000566784	DALRD3	Q5D0E6	543 aa	Known RBP	18.14	■□□□□ 0.49
PKD1-231	ENST00000566784	CHL1	O00533	1208 aa		18.13	■□□□□ 0.49
PKD1-231	ENST00000566784	PRR5L	Q6MZQ0	368 aa		18.13	■□□□□ 0.49
PKD1-231	ENST00000566784	PDZRN3	Q9UPQ7	1066 aa		18.13	■□□□□ 0.49
PKD1-231	ENST00000566784	ADCY9	O60503	1353 aa		18.13	■□□□□ 0.49
PKD1-231	ENST00000566784	COL11A2	P13942	1736 aa	Predicted RBP	18.12	■□□□□ 0.49
PKD1-231	ENST00000566784	CNBD1	Q8NA66	436 aa		18.11	■□□□□ 0.49
PKD1-231	ENST00000566784	BRIP1	Q9BX63	1249 aa		18.11	■□□□□ 0.49
PKD1-231	ENST00000566784	SBF1	O95248	1867 aa		18.11	■□□□□ 0.49
PKD1-231	ENST00000566784	ATP10D	Q9P241	1426 aa		18.1	■□□□□ 0.49
PKD1-231	ENST00000566784	ERVV-1	B6SEH8	477 aa		18.1	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms