RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 TATP17735 454 aaPredicted RBP20.56■□□□□ 0.88
CMTM3-213ENST00000566756 LGR6Q9HBX8 967 aa20.56■□□□□ 0.88
CMTM3-213ENST00000566756 RNMTO43148 476 aaKnown RBP20.55■□□□□ 0.88
CMTM3-213ENST00000566756 CYP2E1P05181 493 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-213ENST00000566756 GNAI3P08754 354 aa20.55■□□□□ 0.88
CMTM3-213ENST00000566756 CCDC30Q5VVM6 783 aa20.55■□□□□ 0.88
CMTM3-213ENST00000566756 COL22A1Q8NFW1 1626 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-213ENST00000566756 SCN11AQ9UI33 1791 aa20.55■□□□□ 0.88
CMTM3-213ENST00000566756 WDR17Q8IZU2 1322 aa20.55■□□□□ 0.88
CMTM3-213ENST00000566756 KLHL40Q2TBA0 621 aa20.55■□□□□ 0.88
CMTM3-213ENST00000566756 ANO8Q9HCE9 1232 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-213ENST00000566756 TUBGCP6Q96RT7 1819 aa20.55■□□□□ 0.88
CMTM3-213ENST00000566756 COL5A2P05997 1499 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-213ENST00000566756 SALL3Q9BXA9 1300 aa20.54■□□□□ 0.88
CMTM3-213ENST00000566756 MEGF6O75095 1541 aa20.54■□□□□ 0.88
CMTM3-213ENST00000566756 SSFA2P28290 1259 aa20.54■□□□□ 0.88
CMTM3-213ENST00000566756 PDE1AP54750 535 aa20.54■□□□□ 0.88
CMTM3-213ENST00000566756 G2E3Q7L622 706 aa20.54■□□□□ 0.88
CMTM3-213ENST00000566756 PANK2Q9BZ23 570 aa20.54■□□□□ 0.88
CMTM3-213ENST00000566756 RRAGDQ9NQL2 400 aaPredicted RBP20.54■□□□□ 0.88
CMTM3-213ENST00000566756 SPG7Q9UQ90 795 aa20.54■□□□□ 0.88
CMTM3-213ENST00000566756 BAG4O95429 457 aaKnown RBP20.54■□□□□ 0.88
CMTM3-213ENST00000566756 SMARCA5O60264 1052 aaPredicted RBP20.53■□□□□ 0.88
CMTM3-213ENST00000566756 TEFQ10587 303 aa20.53■□□□□ 0.88
CMTM3-213ENST00000566756 PARP4Q9UKK3 1724 aaKnown RBP20.53■□□□□ 0.88
CMTM3-213ENST00000566756 MPRIPQ6WCQ1 1025 aa20.52■□□□□ 0.88
CMTM3-213ENST00000566756 CLCN1P35523 988 aa20.51■□□□□ 0.87
CMTM3-213ENST00000566756 FLIIQ13045 1269 aa20.51■□□□□ 0.87
CMTM3-213ENST00000566756 FOXD4L1Q9NU39 408 aa20.51■□□□□ 0.87
CMTM3-213ENST00000566756 EPB41L2O43491 1005 aaKnown RBP20.5■□□□□ 0.87
CMTM3-213ENST00000566756 HOXB7P09629 217 aa20.5■□□□□ 0.87
CMTM3-213ENST00000566756 ATP8B2P98198 1209 aa20.5■□□□□ 0.87
CMTM3-213ENST00000566756 SLC4A10Q6U841 1118 aa20.5■□□□□ 0.87
CMTM3-213ENST00000566756 CHMP4AQ9BY43 222 aa20.5■□□□□ 0.87
CMTM3-213ENST00000566756 SRCIN1Q9C0H9 1055 aa20.5■□□□□ 0.87
CMTM3-213ENST00000566756 AOX1Q06278 1338 aa20.5■□□□□ 0.87
CMTM3-213ENST00000566756 F6X3S4 739 aa20.5■□□□□ 0.87
CMTM3-213ENST00000566756 MCM2P49736 904 aa20.5■□□□□ 0.87
CMTM3-213ENST00000566756 IL17RAQ96F46 866 aa20.5■□□□□ 0.87
CMTM3-213ENST00000566756 LRRCC1Q9C099 1032 aa20.5■□□□□ 0.87
CMTM3-213ENST00000566756 STAP2Q9UGK3 403 aa20.49■□□□□ 0.87
CMTM3-213ENST00000566756 PHKG2P15735 406 aa20.48■□□□□ 0.87
CMTM3-213ENST00000566756 EIF4A1P60842 406 aaKnown RBP20.48■□□□□ 0.87
CMTM3-213ENST00000566756 IFNL2Q8IZJ0 200 aa20.48■□□□□ 0.87
CMTM3-213ENST00000566756 COL14A1Q05707 1796 aaKnown RBP20.48■□□□□ 0.87
CMTM3-213ENST00000566756 BTBD11A6QL63 1104 aa20.48■□□□□ 0.87
CMTM3-213ENST00000566756 ANAPC15P60006 121 aa20.48■□□□□ 0.87
CMTM3-213ENST00000566756 CARD10Q9BWT7 1032 aa20.48■□□□□ 0.87
CMTM3-213ENST00000566756 GAS2L3Q86XJ1 694 aa20.47■□□□□ 0.87
CMTM3-213ENST00000566756 TOM1L2Q6ZVM7 507 aa20.46■□□□□ 0.87
CMTM3-213ENST00000566756 ARXQ96QS3 562 aa20.46■□□□□ 0.87
CMTM3-213ENST00000566756 KDM6AO15550 1401 aaPredicted RBP20.46■□□□□ 0.87
CMTM3-213ENST00000566756 APBB1O00213 710 aa20.46■□□□□ 0.87
CMTM3-213ENST00000566756 FKBP5Q13451 457 aaPredicted RBP20.46■□□□□ 0.87
CMTM3-213ENST00000566756 DDX49Q9Y6V7 483 aaKnown RBP20.46■□□□□ 0.87
CMTM3-213ENST00000566756 PHLPP1O60346 1717 aa20.46■□□□□ 0.87
CMTM3-213ENST00000566756 HEG1Q9ULI3 1381 aa20.45■□□□□ 0.87
CMTM3-213ENST00000566756 MX1P20591 662 aa20.45■□□□□ 0.86
CMTM3-213ENST00000566756 ZNF445P59923 1031 aa20.45■□□□□ 0.86
CMTM3-213ENST00000566756 ESYT1Q9BSJ8 1104 aa20.45■□□□□ 0.86
CMTM3-213ENST00000566756 COL16A1Q07092 1604 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-213ENST00000566756 MRC1P22897 1456 aa20.45■□□□□ 0.86
CMTM3-213ENST00000566756 MCCP23508 829 aa20.45■□□□□ 0.86
CMTM3-213ENST00000566756 DCAF5Q96JK2 942 aa20.44■□□□□ 0.86
CMTM3-213ENST00000566756 EXOC6BQ9Y2D4 811 aa20.43■□□□□ 0.86
CMTM3-213ENST00000566756 CYP27B1O15528 508 aa20.43■□□□□ 0.86
CMTM3-213ENST00000566756 TOM1O60784 492 aa20.43■□□□□ 0.86
CMTM3-213ENST00000566756 SLC52A2Q9HAB3 445 aa20.43■□□□□ 0.86
CMTM3-213ENST00000566756 LMBRD1Q9NUN5 540 aa20.43■□□□□ 0.86
CMTM3-213ENST00000566756 EVA1CP58658 441 aa20.42■□□□□ 0.86
CMTM3-213ENST00000566756 PNMA6EA0A0J9YXQ4 647 aa20.41■□□□□ 0.86
CMTM3-213ENST00000566756 RAB11FIP3O75154 756 aa20.41■□□□□ 0.86
CMTM3-213ENST00000566756 CCDC173Q0VFZ6 552 aa20.41■□□□□ 0.86
CMTM3-213ENST00000566756 HDGFL1Q5TGJ6 251 aa20.41■□□□□ 0.86
CMTM3-213ENST00000566756 PPP1R9BQ96SB3 815 aa20.41■□□□□ 0.86
CMTM3-213ENST00000566756 KCNQ3O43525 872 aa20.41■□□□□ 0.86
CMTM3-213ENST00000566756 SSH3Q8TE77 659 aa20.41■□□□□ 0.86
CMTM3-213ENST00000566756 SHANK3Q9BYB0 1731 aa20.4■□□□□ 0.86
CMTM3-213ENST00000566756 PCDH11XQ9BZA7 1347 aa20.4■□□□□ 0.86
CMTM3-213ENST00000566756 PCDH11YQ9BZA8 1340 aa20.4■□□□□ 0.86
CMTM3-213ENST00000566756 IL2RBP14784 551 aa20.4■□□□□ 0.86
CMTM3-213ENST00000566756 CHMLP26374 656 aa20.4■□□□□ 0.86
CMTM3-213ENST00000566756 CUL4AQ13619 759 aa20.4■□□□□ 0.86
CMTM3-213ENST00000566756 MCTP1Q6DN14 999 aa20.4■□□□□ 0.86
CMTM3-213ENST00000566756 LARP1Q6PKG0 1096 aaKnown RBP20.4■□□□□ 0.86
CMTM3-213ENST00000566756 ZCRB1Q8TBF4 217 aaKnown RBP20.4■□□□□ 0.86
CMTM3-213ENST00000566756 INTS4Q96HW7 963 aaKnown RBP20.4■□□□□ 0.86
CMTM3-213ENST00000566756 USP44Q9H0E7 712 aa20.4■□□□□ 0.86
CMTM3-213ENST00000566756 ESPNB1AK53 854 aa20.39■□□□□ 0.86
CMTM3-213ENST00000566756 TRIM44Q96DX7 344 aaPredicted RBP20.39■□□□□ 0.86
CMTM3-213ENST00000566756 AK9Q5TCS8 1911 aa20.39■□□□□ 0.85
CMTM3-213ENST00000566756 UBTFL1P0CB47 393 aaPredicted RBP20.39■□□□□ 0.85
CMTM3-213ENST00000566756 STRN4Q9NRL3 753 aa20.38■□□□□ 0.85
CMTM3-213ENST00000566756 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.38■□□□□ 0.85
CMTM3-213ENST00000566756 LRRFIP2Q9Y608 721 aaKnown RBP20.38■□□□□ 0.85
CMTM3-213ENST00000566756 GIGYF1O75420 1035 aaPredicted RBP20.37■□□□□ 0.85
CMTM3-213ENST00000566756 POLA2Q14181 598 aa20.37■□□□□ 0.85
CMTM3-213ENST00000566756 ZGPATQ8N5A5 531 aaKnown RBP20.37■□□□□ 0.85
CMTM3-213ENST00000566756 BTG4Q9NY30 223 aa20.37■□□□□ 0.85
CMTM3-213ENST00000566756 NASPP49321 788 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 207.6 ms