RNA–Protein interactions for RNA: ENST00000566613.1

GDPD3-205, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 5

Gene GDPD3, Length 235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-205ENST00000566613 HMGB1P09429 215 aaKnown RBP6.79□□□□□ -1.32
GDPD3-205ENST00000566613 CALRP27797 417 aaKnown RBP6.79□□□□□ -1.32
GDPD3-205ENST00000566613 CASQ1P31415 396 aa6.79□□□□□ -1.32
GDPD3-205ENST00000566613 USP46P62068 366 aa6.79□□□□□ -1.32
GDPD3-205ENST00000566613 SLFN5Q08AF3 891 aa6.79□□□□□ -1.32
GDPD3-205ENST00000566613 VARS2Q5ST30 1063 aaKnown RBP6.79□□□□□ -1.32
GDPD3-205ENST00000566613 CAVIN1Q6NZI2 390 aaKnown RBP6.79□□□□□ -1.32
GDPD3-205ENST00000566613 ZNF454Q8N9F8 522 aa6.79□□□□□ -1.32
GDPD3-205ENST00000566613 PLCD4Q9BRC7 762 aa6.79□□□□□ -1.32
GDPD3-205ENST00000566613 DONSONQ9NYP3 566 aa6.79□□□□□ -1.32
GDPD3-205ENST00000566613 CWC15Q9P013 229 aaKnown RBP6.79□□□□□ -1.32
GDPD3-205ENST00000566613 TBC1D2BQ9UPU7 963 aa6.79□□□□□ -1.32
GDPD3-205ENST00000566613 ADGRL2O95490 1459 aa6.79□□□□□ -1.32
GDPD3-205ENST00000566613 ATAD2BQ9ULI0 1458 aa6.79□□□□□ -1.32
GDPD3-205ENST00000566613 LAMC3Q9Y6N6 1575 aa6.78□□□□□ -1.32
GDPD3-205ENST00000566613 MYOM1P52179 1685 aa6.78□□□□□ -1.32
GDPD3-205ENST00000566613 ANKRD50Q9ULJ7 1429 aa6.78□□□□□ -1.32
GDPD3-205ENST00000566613 HMGXB3Q12766 1538 aa6.78□□□□□ -1.32
GDPD3-205ENST00000566613 KIAA0586Q9BVV6 1533 aa6.78□□□□□ -1.32
GDPD3-205ENST00000566613 MOXD2PA6NHM9 499 aa6.78□□□□□ -1.32
GDPD3-205ENST00000566613 IGHDP01880 384 aa6.78□□□□□ -1.32
GDPD3-205ENST00000566613 USP17L8P0C7I0 530 aa6.78□□□□□ -1.32
GDPD3-205ENST00000566613 DNAJB2P25686 324 aa6.78□□□□□ -1.32
GDPD3-205ENST00000566613 CERS3Q8IU89 383 aa6.78□□□□□ -1.32
GDPD3-205ENST00000566613 ADAM33Q9BZ11 813 aa6.78□□□□□ -1.32
GDPD3-205ENST00000566613 TSPY26PQ9H489 355 aa6.78□□□□□ -1.32
GDPD3-205ENST00000566613 LMBRD1Q9NUN5 540 aa6.78□□□□□ -1.32
GDPD3-205ENST00000566613 BSDC1Q9NW68 430 aaPredicted RBP6.78□□□□□ -1.32
GDPD3-205ENST00000566613 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.78□□□□□ -1.32
GDPD3-205ENST00000566613 DAPK1P53355 1430 aa6.77□□□□□ -1.33
GDPD3-205ENST00000566613 POM121CA8CG34 1229 aa6.77□□□□□ -1.33
GDPD3-205ENST00000566613 SSFA2P28290 1259 aa6.77□□□□□ -1.33
GDPD3-205ENST00000566613 QPCTQ16769 361 aa6.77□□□□□ -1.33
GDPD3-205ENST00000566613 CT47A1Q5JQC4 288 aaPredicted RBP6.77□□□□□ -1.33
GDPD3-205ENST00000566613 RPAINQ86UA6 219 aa6.77□□□□□ -1.33
GDPD3-205ENST00000566613 KIF1BPQ96EK5 621 aa6.77□□□□□ -1.33
GDPD3-205ENST00000566613 GJD4Q96KN9 370 aaPredicted RBP6.77□□□□□ -1.33
GDPD3-205ENST00000566613 TMEM134Q9H6X4 195 aa6.77□□□□□ -1.33
GDPD3-205ENST00000566613 MED4Q9NPJ6 270 aa6.77□□□□□ -1.33
GDPD3-205ENST00000566613 RSPH14Q9UHP6 348 aa6.77□□□□□ -1.33
GDPD3-205ENST00000566613 PDZRN3Q9UPQ7 1066 aa6.77□□□□□ -1.33
GDPD3-205ENST00000566613 GPRASP1Q5JY77 1395 aa6.77□□□□□ -1.33
GDPD3-205ENST00000566613 CARMIL1Q5VZK9 1371 aa6.77□□□□□ -1.33
GDPD3-205ENST00000566613 IQGAP1P46940 1657 aa6.77□□□□□ -1.33
GDPD3-205ENST00000566613 MAGI3Q5TCQ9 1506 aa6.76□□□□□ -1.33
GDPD3-205ENST00000566613 CDC42BPAQ5VT25 1732 aa6.76□□□□□ -1.33
GDPD3-205ENST00000566613 PSDA5PKW4 1024 aaPredicted RBP6.76□□□□□ -1.33
GDPD3-205ENST00000566613 AP1G2O75843 785 aa6.76□□□□□ -1.33
GDPD3-205ENST00000566613 SRPK2P78362 688 aaKnown RBP6.76□□□□□ -1.33
GDPD3-205ENST00000566613 TRDNQ13061 729 aa6.76□□□□□ -1.33
GDPD3-205ENST00000566613 RABEP1Q15276 862 aa6.76□□□□□ -1.33
GDPD3-205ENST00000566613 NOM1Q5C9Z4 860 aaKnown RBP6.76□□□□□ -1.33
GDPD3-205ENST00000566613 TEX35Q5T0J7 233 aa6.76□□□□□ -1.33
GDPD3-205ENST00000566613 CCDC91Q7Z6B0 441 aa6.76□□□□□ -1.33
GDPD3-205ENST00000566613 TSC1Q92574 1164 aa6.76□□□□□ -1.33
GDPD3-205ENST00000566613 TACO1Q9BSH4 297 aaKnown RBP6.76□□□□□ -1.33
GDPD3-205ENST00000566613 RWDD1Q9H446 243 aaPredicted RBP6.76□□□□□ -1.33
GDPD3-205ENST00000566613 ZBTB3Q9H5J0 574 aa6.76□□□□□ -1.33
GDPD3-205ENST00000566613 USP25Q9UHP3 1055 aa6.76□□□□□ -1.33
GDPD3-205ENST00000566613 SHPRHQ149N8 1683 aa6.76□□□□□ -1.33
GDPD3-205ENST00000566613 ASXL1Q8IXJ9 1541 aa6.76□□□□□ -1.33
GDPD3-205ENST00000566613 PTPRGP23470 1445 aa6.76□□□□□ -1.33
GDPD3-205ENST00000566613 IQSEC2Q5JU85 1478 aa6.75□□□□□ -1.33
GDPD3-205ENST00000566613 IGF1RP08069 1367 aa6.75□□□□□ -1.33
GDPD3-205ENST00000566613 PLEKHG2Q9H7P9 1386 aa6.75□□□□□ -1.33
GDPD3-205ENST00000566613 LOC102724159A0A0B4J2E5 919 aa6.75□□□□□ -1.33
GDPD3-205ENST00000566613 A0A1B0GUL7 405 aa6.75□□□□□ -1.33
GDPD3-205ENST00000566613 NBPF26B4DH59 902 aa6.75□□□□□ -1.33
GDPD3-205ENST00000566613 IGSF3O75054 1194 aa6.75□□□□□ -1.33
GDPD3-205ENST00000566613 SETQ01105 290 aaPredicted RBP6.75□□□□□ -1.33
GDPD3-205ENST00000566613 PWP2Q15269 919 aaKnown RBP6.75□□□□□ -1.33
GDPD3-205ENST00000566613 NBPF9Q3BBW0 867 aa6.75□□□□□ -1.33
GDPD3-205ENST00000566613 GPR153Q6NV75 609 aa6.75□□□□□ -1.33
GDPD3-205ENST00000566613 NBPF11Q86T75 865 aa6.75□□□□□ -1.33
GDPD3-205ENST00000566613 SUGP1Q8IWZ8 645 aaKnown RBP6.75□□□□□ -1.33
GDPD3-205ENST00000566613 IQUBQ8NA54 791 aa6.75□□□□□ -1.33
GDPD3-205ENST00000566613 KIAA1524Q8TCG1 905 aa6.75□□□□□ -1.33
GDPD3-205ENST00000566613 NOL10Q9BSC4 688 aaKnown RBP6.75□□□□□ -1.33
GDPD3-205ENST00000566613 CWC22Q9HCG8 908 aaKnown RBP6.75□□□□□ -1.33
GDPD3-205ENST00000566613 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.75□□□□□ -1.33
GDPD3-205ENST00000566613 KNSTRNQ9Y448 316 aa6.75□□□□□ -1.33
GDPD3-205ENST00000566613 PAXBP1Q9Y5B6 917 aa6.75□□□□□ -1.33
GDPD3-205ENST00000566613 NUP160Q12769 1436 aa6.75□□□□□ -1.33
GDPD3-205ENST00000566613 ERICH4A6NGS2 130 aa6.74□□□□□ -1.33
GDPD3-205ENST00000566613 NUTM2BA6NNL0 878 aaPredicted RBP6.74□□□□□ -1.33
GDPD3-205ENST00000566613 NUTM2EB1AL46 878 aaPredicted RBP6.74□□□□□ -1.33
GDPD3-205ENST00000566613 PPP1R3GB7ZBB8 358 aa6.74□□□□□ -1.33
GDPD3-205ENST00000566613 HTATSF1O43719 755 aaKnown RBP6.74□□□□□ -1.33
GDPD3-205ENST00000566613 CSB-PGBD3P0DP91 1061 aa6.74□□□□□ -1.33
GDPD3-205ENST00000566613 ATP2B1P20020 1258 aa6.74□□□□□ -1.33
GDPD3-205ENST00000566613 SOX11P35716 441 aa6.74□□□□□ -1.33
GDPD3-205ENST00000566613 HNRNPH2P55795 449 aaKnown RBP6.74□□□□□ -1.33
GDPD3-205ENST00000566613 TPM4P67936 248 aa6.74□□□□□ -1.33
GDPD3-205ENST00000566613 MAP2K1Q02750 393 aaPredicted RBP6.74□□□□□ -1.33
GDPD3-205ENST00000566613 GPS2Q13227 327 aa6.74□□□□□ -1.33
GDPD3-205ENST00000566613 ARSIQ5FYB1 569 aa6.74□□□□□ -1.33
GDPD3-205ENST00000566613 CFAP70Q5T0N1 1121 aa6.74□□□□□ -1.33
GDPD3-205ENST00000566613 SWT1Q5T5J6 900 aaKnown RBP6.74□□□□□ -1.33
GDPD3-205ENST00000566613 HDGFL1Q5TGJ6 251 aa6.74□□□□□ -1.33
GDPD3-205ENST00000566613 NUTM2DQ5VT03 806 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms