RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 PROSER3Q2NL68 480 aa10.79□□□□□ -0.68
LINC01541-201ENST00000566582 PPP1R42Q7Z4L9 355 aa10.79□□□□□ -0.68
LINC01541-201ENST00000566582 MEGF6O75095 1541 aa10.79□□□□□ -0.68
LINC01541-201ENST00000566582 LMTK3Q96Q04 1460 aa10.78□□□□□ -0.68
LINC01541-201ENST00000566582 SURF6O75683 361 aaKnown RBP10.78□□□□□ -0.68
LINC01541-201ENST00000566582 DDX58O95786 925 aaKnown RBP10.78□□□□□ -0.68
LINC01541-201ENST00000566582 TOM1L2Q6ZVM7 507 aa10.78□□□□□ -0.68
LINC01541-201ENST00000566582 ADCY9O60503 1353 aa10.78□□□□□ -0.68
LINC01541-201ENST00000566582 IBTKQ9P2D0 1353 aaPredicted RBP10.78□□□□□ -0.68
LINC01541-201ENST00000566582 MX1P20591 662 aa10.78□□□□□ -0.68
LINC01541-201ENST00000566582 TSHZ3Q63HK5 1081 aa10.78□□□□□ -0.68
LINC01541-201ENST00000566582 KSR2Q6VAB6 950 aa10.78□□□□□ -0.68
LINC01541-201ENST00000566582 DCAF5Q96JK2 942 aa10.78□□□□□ -0.68
LINC01541-201ENST00000566582 MYL6BP14649 208 aa10.77□□□□□ -0.68
LINC01541-201ENST00000566582 CABP4P57796 275 aa10.77□□□□□ -0.68
LINC01541-201ENST00000566582 SSH3Q8TE77 659 aa10.77□□□□□ -0.68
LINC01541-201ENST00000566582 IL1RAPL2Q9NP60 686 aa10.77□□□□□ -0.68
LINC01541-201ENST00000566582 DDX21Q9NR30 783 aaKnown RBP eCLIP10.77□□□□□ -0.68
LINC01541-201ENST00000566582 KDM6AO15550 1401 aaPredicted RBP10.77□□□□□ -0.68
LINC01541-201ENST00000566582 CPDO75976 1380 aa10.77□□□□□ -0.69
LINC01541-201ENST00000566582 HEG1Q9ULI3 1381 aa10.77□□□□□ -0.69
LINC01541-201ENST00000566582 TRIM6-TRIM34B2RNG4 842 aa10.77□□□□□ -0.69
LINC01541-201ENST00000566582 CYP27B1O15528 508 aa10.77□□□□□ -0.69
LINC01541-201ENST00000566582 HSP90AA1P07900 732 aaKnown RBP10.77□□□□□ -0.69
LINC01541-201ENST00000566582 HSP90AB1P08238 724 aaKnown RBP10.77□□□□□ -0.69
LINC01541-201ENST00000566582 OSBPL3Q9H4L5 887 aa10.77□□□□□ -0.69
LINC01541-201ENST00000566582 XIRP1Q702N8 1843 aaKnown RBP10.77□□□□□ -0.69
LINC01541-201ENST00000566582 COL18A1P39060 1754 aa10.76□□□□□ -0.69
LINC01541-201ENST00000566582 N4BP2Q86UW6 1770 aaPredicted RBP10.76□□□□□ -0.69
LINC01541-201ENST00000566582 OS9Q13438 667 aaPredicted RBP10.76□□□□□ -0.69
LINC01541-201ENST00000566582 CWF19L2Q2TBE0 894 aaKnown RBP10.76□□□□□ -0.69
LINC01541-201ENST00000566582 RIC3Q7Z5B4 369 aa10.76□□□□□ -0.69
LINC01541-201ENST00000566582 RILPL2Q969X0 211 aa10.76□□□□□ -0.69
LINC01541-201ENST00000566582 RAB11FIP3O75154 756 aa10.76□□□□□ -0.69
LINC01541-201ENST00000566582 ZNF496Q96IT1 587 aaPredicted RBP10.76□□□□□ -0.69
LINC01541-201ENST00000566582 ANTXR1Q9H6X2 564 aa10.76□□□□□ -0.69
LINC01541-201ENST00000566582 HDAC5Q9UQL6 1122 aa10.76□□□□□ -0.69
LINC01541-201ENST00000566582 STRCQ7RTU9 1775 aa10.76□□□□□ -0.69
LINC01541-201ENST00000566582 ALDH1L1O75891 902 aa10.75□□□□□ -0.69
LINC01541-201ENST00000566582 REC8O95072 547 aa10.75□□□□□ -0.69
LINC01541-201ENST00000566582 SIPA1L3O60292 1781 aaPredicted RBP10.75□□□□□ -0.69
LINC01541-201ENST00000566582 SNRPA1P09661 255 aaKnown RBP10.75□□□□□ -0.69
LINC01541-201ENST00000566582 EVA1CP58658 441 aa10.75□□□□□ -0.69
LINC01541-201ENST00000566582 NEXNQ0ZGT2 675 aa10.75□□□□□ -0.69
LINC01541-201ENST00000566582 HSP90AB4PQ58FF6 505 aa10.75□□□□□ -0.69
LINC01541-201ENST00000566582 SNX21Q969T3 373 aa10.75□□□□□ -0.69
LINC01541-201ENST00000566582 FMNL2Q96PY5 1086 aa10.75□□□□□ -0.69
LINC01541-201ENST00000566582 KIF2CQ99661 725 aa10.75□□□□□ -0.69
LINC01541-201ENST00000566582 RBM42Q9BTD8 480 aaKnown RBP10.75□□□□□ -0.69
LINC01541-201ENST00000566582 STRN4Q9NRL3 753 aa10.75□□□□□ -0.69
LINC01541-201ENST00000566582 SOS2Q07890 1332 aaPredicted RBP10.75□□□□□ -0.69
LINC01541-201ENST00000566582 WDR17Q8IZU2 1322 aa10.75□□□□□ -0.69
LINC01541-201ENST00000566582 SCN11AQ9UI33 1791 aa10.74□□□□□ -0.69
LINC01541-201ENST00000566582 ABCC6O95255 1503 aa10.74□□□□□ -0.69
LINC01541-201ENST00000566582 POLA2Q14181 598 aa10.74□□□□□ -0.69
LINC01541-201ENST00000566582 NUTM1Q86Y26 1132 aa10.74□□□□□ -0.69
LINC01541-201ENST00000566582 LINS1Q8NG48 757 aa10.74□□□□□ -0.69
LINC01541-201ENST00000566582 RHPN1Q8TCX5 695 aa10.74□□□□□ -0.69
LINC01541-201ENST00000566582 KIF1BPQ96EK5 621 aa10.74□□□□□ -0.69
LINC01541-201ENST00000566582 USP26Q9BXU7 913 aa10.74□□□□□ -0.69
LINC01541-201ENST00000566582 ADAMTS7Q9UKP4 1686 aa10.74□□□□□ -0.69
LINC01541-201ENST00000566582 CRYBG1Q9Y4K1 1723 aa10.74□□□□□ -0.69
LINC01541-201ENST00000566582 ERC2O15083 957 aa10.74□□□□□ -0.69
LINC01541-201ENST00000566582 ZCRB1Q8TBF4 217 aaKnown RBP10.74□□□□□ -0.69
LINC01541-201ENST00000566582 CHMP5Q9NZZ3 219 aa10.74□□□□□ -0.69
LINC01541-201ENST00000566582 PIP4K2AP48426 406 aaPredicted RBP10.73□□□□□ -0.69
LINC01541-201ENST00000566582 PDIA6Q15084 440 aa10.73□□□□□ -0.69
LINC01541-201ENST00000566582 LARP1Q6PKG0 1096 aaKnown RBP10.73□□□□□ -0.69
LINC01541-201ENST00000566582 COPS6Q7L5N1 327 aa10.73□□□□□ -0.69
LINC01541-201ENST00000566582 XAGE3Q8WTP9 111 aa10.73□□□□□ -0.69
LINC01541-201ENST00000566582 USP16Q9Y5T5 823 aa10.73□□□□□ -0.69
LINC01541-201ENST00000566582 SALL3Q9BXA9 1300 aa10.73□□□□□ -0.69
LINC01541-201ENST00000566582 PCDH11XQ9BZA7 1347 aa10.73□□□□□ -0.69
LINC01541-201ENST00000566582 PCDH11YQ9BZA8 1340 aa10.73□□□□□ -0.69
LINC01541-201ENST00000566582 GRM8O00222 908 aa10.73□□□□□ -0.69
LINC01541-201ENST00000566582 DDX54Q8TDD1 881 aaKnown RBP10.73□□□□□ -0.69
LINC01541-201ENST00000566582 K7ELQ4 463 aaPredicted RBP10.72□□□□□ -0.69
LINC01541-201ENST00000566582 FOXD4L1Q9NU39 408 aa10.72□□□□□ -0.69
LINC01541-201ENST00000566582 STAP2Q9UGK3 403 aa10.72□□□□□ -0.69
LINC01541-201ENST00000566582 PLEKHG2Q9H7P9 1386 aa10.72□□□□□ -0.69
LINC01541-201ENST00000566582 IL2RBP14784 551 aa10.72□□□□□ -0.69
LINC01541-201ENST00000566582 RABEP1Q15276 862 aa10.72□□□□□ -0.69
LINC01541-201ENST00000566582 MYD88Q99836 296 aa10.72□□□□□ -0.69
LINC01541-201ENST00000566582 CD2BP2O95400 341 aaKnown RBP10.71□□□□□ -0.69
LINC01541-201ENST00000566582 MAP4K4O95819 1239 aaPredicted RBP10.71□□□□□ -0.69
LINC01541-201ENST00000566582 ANKRD13DQ6ZTN6 518 aa10.71□□□□□ -0.69
LINC01541-201ENST00000566582 MTX1Q13505 466 aa10.7□□□□□ -0.7
LINC01541-201ENST00000566582 GSE1Q14687 1217 aa10.7□□□□□ -0.7
LINC01541-201ENST00000566582 CLASRPQ8N2M8 674 aaKnown RBP10.7□□□□□ -0.7
LINC01541-201ENST00000566582 SUCLG2Q96I99 432 aa10.7□□□□□ -0.7
LINC01541-201ENST00000566582 COL5A2P05997 1499 aaPredicted RBP10.7□□□□□ -0.7
LINC01541-201ENST00000566582 C5P01031 1676 aa10.7□□□□□ -0.7
LINC01541-201ENST00000566582 AOX1Q06278 1338 aa10.7□□□□□ -0.7
LINC01541-201ENST00000566582 ESYT1Q9BSJ8 1104 aa10.7□□□□□ -0.7
LINC01541-201ENST00000566582 BICC1Q9H694 974 aaKnown RBP10.7□□□□□ -0.7
LINC01541-201ENST00000566582 ANO2Q9NQ90 1003 aa10.7□□□□□ -0.7
LINC01541-201ENST00000566582 PA2G4Q9UQ80 394 aaKnown RBP10.7□□□□□ -0.7
LINC01541-201ENST00000566582 PKD1L3Q7Z443 1732 aa10.7□□□□□ -0.7
LINC01541-201ENST00000566582 IGKV5-2P06315 115 aa10.69□□□□□ -0.7
LINC01541-201ENST00000566582 CHMLP26374 656 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms