RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 YY1P25490 414 aa16.74■□□□□ 0.27
LPCAT4-206ENST00000566581 DCTN1Q14203 1278 aa16.74■□□□□ 0.27
LPCAT4-206ENST00000566581 TAF7Q15545 349 aaPredicted RBP16.74■□□□□ 0.27
LPCAT4-206ENST00000566581 ZBTB1Q9Y2K1 713 aa16.74■□□□□ 0.27
LPCAT4-206ENST00000566581 KCNQ3O43525 872 aa16.73■□□□□ 0.27
LPCAT4-206ENST00000566581 ZPR1O75312 459 aa16.73■□□□□ 0.27
LPCAT4-206ENST00000566581 SRP68Q9UHB9 627 aaKnown RBP16.73■□□□□ 0.27
LPCAT4-206ENST00000566581 NARFQ9UHQ1 456 aa16.73■□□□□ 0.27
LPCAT4-206ENST00000566581 COL15A1P39059 1388 aa16.73■□□□□ 0.27
LPCAT4-206ENST00000566581 MAPK8IP3Q9UPT6 1336 aa16.72■□□□□ 0.27
LPCAT4-206ENST00000566581 EIF5P55010 431 aaKnown RBP16.72■□□□□ 0.27
LPCAT4-206ENST00000566581 AFDNP55196 1824 aaKnown RBP16.71■□□□□ 0.27
LPCAT4-206ENST00000566581 GRIN3BO60391 1043 aa16.71■□□□□ 0.27
LPCAT4-206ENST00000566581 TM4SF1P30408 202 aa16.71■□□□□ 0.27
LPCAT4-206ENST00000566581 FKBP8Q14318 412 aa16.71■□□□□ 0.27
LPCAT4-206ENST00000566581 PARP3Q9Y6F1 533 aa16.71■□□□□ 0.27
LPCAT4-206ENST00000566581 KDM3BQ7LBC6 1761 aa16.71■□□□□ 0.27
LPCAT4-206ENST00000566581 N4BP2Q86UW6 1770 aaPredicted RBP16.71■□□□□ 0.27
LPCAT4-206ENST00000566581 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
LPCAT4-206ENST00000566581 BRCA1P38398 1863 aaKnown RBP16.7■□□□□ 0.26
LPCAT4-206ENST00000566581 A0A087WZG4 1122 aa16.7■□□□□ 0.26
LPCAT4-206ENST00000566581 SNRPA1P09661 255 aaKnown RBP16.7■□□□□ 0.26
LPCAT4-206ENST00000566581 YBX3P16989 372 aaKnown RBP eCLIP16.7■□□□□ 0.26
LPCAT4-206ENST00000566581 CANXP27824 592 aaKnown RBP16.7■□□□□ 0.26
LPCAT4-206ENST00000566581 IL6STP40189 918 aaPredicted RBP16.7■□□□□ 0.26
LPCAT4-206ENST00000566581 TGFB2P61812 414 aa16.7■□□□□ 0.26
LPCAT4-206ENST00000566581 USPL1Q5W0Q7 1092 aa16.7■□□□□ 0.26
LPCAT4-206ENST00000566581 PNISRQ8TF01 805 aaKnown RBP16.7■□□□□ 0.26
LPCAT4-206ENST00000566581 PELP1Q8IZL8 1130 aaKnown RBP16.69■□□□□ 0.26
LPCAT4-206ENST00000566581 USP16Q9Y5T5 823 aa16.69■□□□□ 0.26
LPCAT4-206ENST00000566581 C10orf71Q711Q0 1435 aa16.69■□□□□ 0.26
LPCAT4-206ENST00000566581 NRXN2Q9P2S2 1712 aa16.67■□□□□ 0.26
LPCAT4-206ENST00000566581 A1BGP04217 495 aa16.67■□□□□ 0.26
LPCAT4-206ENST00000566581 TMPOP42166 694 aaKnown RBP16.67■□□□□ 0.26
LPCAT4-206ENST00000566581 RIPK4P57078 832 aa16.67■□□□□ 0.26
LPCAT4-206ENST00000566581 DDR1Q08345 913 aa16.67■□□□□ 0.26
LPCAT4-206ENST00000566581 WDR43Q15061 677 aaKnown RBP eCLIP16.67■□□□□ 0.26
LPCAT4-206ENST00000566581 BCL2L12Q9HB09 334 aa16.67■□□□□ 0.26
LPCAT4-206ENST00000566581 LAMB4A4D0S4 1761 aa16.66■□□□□ 0.26
LPCAT4-206ENST00000566581 ZNF316A6NFI3 1004 aaPredicted RBP16.66■□□□□ 0.26
LPCAT4-206ENST00000566581 POLRMTO00411 1230 aaKnown RBP16.66■□□□□ 0.26
LPCAT4-206ENST00000566581 RUNDC1Q96C34 613 aa16.66■□□□□ 0.26
LPCAT4-206ENST00000566581 MIS18AQ9NYP9 233 aa16.66■□□□□ 0.26
LPCAT4-206ENST00000566581 PXDNLA1KZ92 1463 aa16.66■□□□□ 0.26
LPCAT4-206ENST00000566581 LMOD3Q0VAK6 560 aa16.65■□□□□ 0.26
LPCAT4-206ENST00000566581 NFIXQ14938 502 aa16.65■□□□□ 0.26
LPCAT4-206ENST00000566581 NPM2Q86SE8 214 aaKnown RBP16.65■□□□□ 0.26
LPCAT4-206ENST00000566581 THUMPD2Q9BTF0 503 aaKnown RBP16.65■□□□□ 0.26
LPCAT4-206ENST00000566581 ADAMTS8Q9UP79 889 aa16.65■□□□□ 0.26
LPCAT4-206ENST00000566581 SCN7AQ01118 1682 aa16.65■□□□□ 0.26
LPCAT4-206ENST00000566581 ARFGEF1Q9Y6D6 1849 aa16.64■□□□□ 0.25
LPCAT4-206ENST00000566581 PRAMEF22A3QJZ6 481 aa16.64■□□□□ 0.25
LPCAT4-206ENST00000566581 BABAM1Q9NWV8 329 aa16.64■□□□□ 0.25
LPCAT4-206ENST00000566581 BCORQ6W2J9 1755 aa16.64■□□□□ 0.25
LPCAT4-206ENST00000566581 A0A0G2JLW4 131 aa16.63■□□□□ 0.25
LPCAT4-206ENST00000566581 GIGYF1O75420 1035 aaPredicted RBP16.63■□□□□ 0.25
LPCAT4-206ENST00000566581 EIF4A1P60842 406 aaKnown RBP16.63■□□□□ 0.25
LPCAT4-206ENST00000566581 TBC1D2BQ9UPU7 963 aa16.63■□□□□ 0.25
LPCAT4-206ENST00000566581 KCNA3P22001 575 aa16.62■□□□□ 0.25
LPCAT4-206ENST00000566581 CCDC146Q8IYE0 955 aa16.62■□□□□ 0.25
LPCAT4-206ENST00000566581 RGL2O15211 777 aa16.61■□□□□ 0.25
LPCAT4-206ENST00000566581 CAMTA2O94983 1202 aa16.61■□□□□ 0.25
LPCAT4-206ENST00000566581 SERPINB2P05120 415 aa16.61■□□□□ 0.25
LPCAT4-206ENST00000566581 DPEP1P16444 411 aa16.61■□□□□ 0.25
LPCAT4-206ENST00000566581 ZNF330Q9Y3S2 320 aaPredicted RBP16.61■□□□□ 0.25
LPCAT4-206ENST00000566581 NBPF26B4DH59 902 aa16.6■□□□□ 0.25
LPCAT4-206ENST00000566581 NBPF10Q6P3W6 841 aaKnown RBP16.6■□□□□ 0.25
LPCAT4-206ENST00000566581 CLEC4GQ6UXB4 293 aa16.6■□□□□ 0.25
LPCAT4-206ENST00000566581 DZIP3Q86Y13 1208 aaKnown RBP16.6■□□□□ 0.25
LPCAT4-206ENST00000566581 NBPF15Q8N660 670 aa16.6■□□□□ 0.25
LPCAT4-206ENST00000566581 ZNF784Q8NCA9 323 aaPredicted RBP16.6■□□□□ 0.25
LPCAT4-206ENST00000566581 NUP98P52948 1817 aa16.59■□□□□ 0.25
LPCAT4-206ENST00000566581 TBC1D9BQ66K14 1250 aa16.59■□□□□ 0.25
LPCAT4-206ENST00000566581 TSPYL4Q9UJ04 414 aa16.59■□□□□ 0.25
LPCAT4-206ENST00000566581 TRIM35Q9UPQ4 493 aa16.59■□□□□ 0.25
LPCAT4-206ENST00000566581 RRP7AQ9Y3A4 280 aaKnown RBP16.59■□□□□ 0.25
LPCAT4-206ENST00000566581 DLEC1Q9Y238 1755 aa16.59■□□□□ 0.25
LPCAT4-206ENST00000566581 PIP4K2AP48426 406 aaPredicted RBP16.58■□□□□ 0.24
LPCAT4-206ENST00000566581 NEUROD2Q15784 382 aa16.58■□□□□ 0.24
LPCAT4-206ENST00000566581 PIM2Q9P1W9 311 aa16.58■□□□□ 0.24
LPCAT4-206ENST00000566581 ANKRD31Q8N7Z5 1873 aa16.58■□□□□ 0.24
LPCAT4-206ENST00000566581 CARMIL3Q8ND23 1372 aa16.57■□□□□ 0.24
LPCAT4-206ENST00000566581 BICDL1Q6ZP65 573 aa16.57■□□□□ 0.24
LPCAT4-206ENST00000566581 SETDB2Q96T68 719 aa16.57■□□□□ 0.24
LPCAT4-206ENST00000566581 WWC3Q9ULE0 1092 aa16.57■□□□□ 0.24
LPCAT4-206ENST00000566581 BCS1LQ9Y276 419 aa16.57■□□□□ 0.24
LPCAT4-206ENST00000566581 CHL1O00533 1208 aa16.56■□□□□ 0.24
LPCAT4-206ENST00000566581 ZNF652Q9Y2D9 606 aa16.56■□□□□ 0.24
LPCAT4-206ENST00000566581 SBF1O95248 1867 aa16.56■□□□□ 0.24
LPCAT4-206ENST00000566581 ERBB4Q15303 1308 aa16.55■□□□□ 0.24
LPCAT4-206ENST00000566581 CHRNA5P30532 468 aa16.54■□□□□ 0.24
LPCAT4-206ENST00000566581 DALRD3Q5D0E6 543 aaKnown RBP16.54■□□□□ 0.24
LPCAT4-206ENST00000566581 BRIP1Q9BX63 1249 aa16.54■□□□□ 0.24
LPCAT4-206ENST00000566581 PDZRN3Q9UPQ7 1066 aa16.54■□□□□ 0.24
LPCAT4-206ENST00000566581 ERVV-1B6SEH8 477 aa16.53■□□□□ 0.24
LPCAT4-206ENST00000566581 APAF1O14727 1248 aa16.53■□□□□ 0.24
LPCAT4-206ENST00000566581 ANP32CO43423 234 aa16.53■□□□□ 0.24
LPCAT4-206ENST00000566581 CCDC184Q52MB2 194 aa16.53■□□□□ 0.24
LPCAT4-206ENST00000566581 PRR5LQ6MZQ0 368 aa16.53■□□□□ 0.24
LPCAT4-206ENST00000566581 H0YIN7 160 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms