RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 PARP3Q9Y6F1 533 aa16.47■□□□□ 0.23
KLHDC4-216ENST00000566561 KCPQ6ZWJ8 1503 aa16.46■□□□□ 0.23
KLHDC4-216ENST00000566561 BCS1LQ9Y276 419 aa16.46■□□□□ 0.23
KLHDC4-216ENST00000566561 ADAMTS7Q9UKP4 1686 aa16.46■□□□□ 0.23
KLHDC4-216ENST00000566561 USP42Q9H9J4 1324 aaKnown RBP16.45■□□□□ 0.22
KLHDC4-216ENST00000566561 TJP1Q07157 1748 aa16.45■□□□□ 0.22
KLHDC4-216ENST00000566561 BTBD11A6QL63 1104 aa16.45■□□□□ 0.22
KLHDC4-216ENST00000566561 ZPR1O75312 459 aa16.45■□□□□ 0.22
KLHDC4-216ENST00000566561 TOMM70O94826 608 aa16.45■□□□□ 0.22
KLHDC4-216ENST00000566561 STARD3NLO95772 234 aa16.45■□□□□ 0.22
KLHDC4-216ENST00000566561 TGFB2P61812 414 aa16.45■□□□□ 0.22
KLHDC4-216ENST00000566561 ZNF496Q96IT1 587 aaPredicted RBP16.45■□□□□ 0.22
KLHDC4-216ENST00000566561 CEMIPQ8WUJ3 1361 aa16.45■□□□□ 0.22
KLHDC4-216ENST00000566561 TNRC6CQ9HCJ0 1690 aaKnown RBP16.44■□□□□ 0.22
KLHDC4-216ENST00000566561 CANXP27824 592 aaKnown RBP16.44■□□□□ 0.22
KLHDC4-216ENST00000566561 RALBP1Q15311 655 aa16.44■□□□□ 0.22
KLHDC4-216ENST00000566561 MCM10Q7L590 875 aa16.44■□□□□ 0.22
KLHDC4-216ENST00000566561 FMNL2Q96PY5 1086 aa16.44■□□□□ 0.22
KLHDC4-216ENST00000566561 ZBTB1Q9Y2K1 713 aa16.44■□□□□ 0.22
KLHDC4-216ENST00000566561 MYH14Q7Z406 1995 aaKnown RBP16.44■□□□□ 0.22
KLHDC4-216ENST00000566561 SOS1Q07889 1333 aaPredicted RBP16.44■□□□□ 0.22
KLHDC4-216ENST00000566561 HEG1Q9ULI3 1381 aa16.43■□□□□ 0.22
KLHDC4-216ENST00000566561 FKBP8Q14318 412 aa16.43■□□□□ 0.22
KLHDC4-216ENST00000566561 USPL1Q5W0Q7 1092 aa16.43■□□□□ 0.22
KLHDC4-216ENST00000566561 TEX13AQ9BXU3 409 aaPredicted RBP16.43■□□□□ 0.22
KLHDC4-216ENST00000566561 HTATSF1O43719 755 aaKnown RBP16.42■□□□□ 0.22
KLHDC4-216ENST00000566561 DCTN1Q14203 1278 aa16.42■□□□□ 0.22
KLHDC4-216ENST00000566561 COL15A1P39059 1388 aa16.41■□□□□ 0.22
KLHDC4-216ENST00000566561 KCNQ3O43525 872 aa16.41■□□□□ 0.22
KLHDC4-216ENST00000566561 ARHGAP27Q6ZUM4 889 aa16.41■□□□□ 0.22
KLHDC4-216ENST00000566561 C16orf71Q8IYS4 520 aaPredicted RBP16.41■□□□□ 0.22
KLHDC4-216ENST00000566561 PNNQ9H307 717 aaKnown RBP16.41■□□□□ 0.22
KLHDC4-216ENST00000566561 SBF1O95248 1867 aa16.4■□□□□ 0.22
KLHDC4-216ENST00000566561 A0A0G2JLW4 131 aa16.4■□□□□ 0.22
KLHDC4-216ENST00000566561 NARFQ9UHQ1 456 aa16.4■□□□□ 0.22
KLHDC4-216ENST00000566561 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
KLHDC4-216ENST00000566561 MAPK8IP3Q9UPT6 1336 aa16.4■□□□□ 0.22
KLHDC4-216ENST00000566561 NPM2Q86SE8 214 aaKnown RBP16.39■□□□□ 0.21
KLHDC4-216ENST00000566561 RBM46Q8TBY0 533 aaKnown RBP16.39■□□□□ 0.21
KLHDC4-216ENST00000566561 NMRK2Q9NPI5 230 aa16.39■□□□□ 0.21
KLHDC4-216ENST00000566561 A0A087WZG4 1122 aa16.38■□□□□ 0.21
KLHDC4-216ENST00000566561 DPEP1P16444 411 aa16.38■□□□□ 0.21
KLHDC4-216ENST00000566561 DDR1Q08345 913 aa16.38■□□□□ 0.21
KLHDC4-216ENST00000566561 TAF7Q15545 349 aaPredicted RBP16.38■□□□□ 0.21
KLHDC4-216ENST00000566561 PLEKHF1Q96S99 279 aa16.38■□□□□ 0.21
KLHDC4-216ENST00000566561 POLRMTO00411 1230 aaKnown RBP16.37■□□□□ 0.21
KLHDC4-216ENST00000566561 TM4SF1P30408 202 aa16.37■□□□□ 0.21
KLHDC4-216ENST00000566561 EIF5P55010 431 aaKnown RBP16.37■□□□□ 0.21
KLHDC4-216ENST00000566561 NFE2L2Q16236 605 aa16.37■□□□□ 0.21
KLHDC4-216ENST00000566561 MYBBP1AQ9BQG0 1328 aaKnown RBP16.37■□□□□ 0.21
KLHDC4-216ENST00000566561 UBR2Q8IWV8 1755 aa16.36■□□□□ 0.21
KLHDC4-216ENST00000566561 VIRMAQ69YN4 1812 aaKnown RBP16.36■□□□□ 0.21
KLHDC4-216ENST00000566561 A1BGP04217 495 aa16.36■□□□□ 0.21
KLHDC4-216ENST00000566561 SNRPA1P09661 255 aaKnown RBP16.36■□□□□ 0.21
KLHDC4-216ENST00000566561 C9orf131Q5VYM1 1079 aa16.36■□□□□ 0.21
KLHDC4-216ENST00000566561 DNAJC5GQ8N7S2 189 aa16.36■□□□□ 0.21
KLHDC4-216ENST00000566561 USP16Q9Y5T5 823 aa16.36■□□□□ 0.21
KLHDC4-216ENST00000566561 KDM2BQ8NHM5 1336 aa16.36■□□□□ 0.21
KLHDC4-216ENST00000566561 IL6STP40189 918 aaPredicted RBP16.35■□□□□ 0.21
KLHDC4-216ENST00000566561 NFIXQ14938 502 aa16.35■□□□□ 0.21
KLHDC4-216ENST00000566561 BCL2L12Q9HB09 334 aa16.35■□□□□ 0.21
KLHDC4-216ENST00000566561 MIS18AQ9NYP9 233 aa16.35■□□□□ 0.21
KLHDC4-216ENST00000566561 PRAMEF22A3QJZ6 481 aa16.34■□□□□ 0.21
KLHDC4-216ENST00000566561 ZEB1P37275 1124 aaPredicted RBP16.34■□□□□ 0.21
KLHDC4-216ENST00000566561 FSTL1Q12841 308 aa16.34■□□□□ 0.21
KLHDC4-216ENST00000566561 BICDL1Q6ZP65 573 aa16.34■□□□□ 0.21
KLHDC4-216ENST00000566561 PIM2Q9P1W9 311 aa16.34■□□□□ 0.21
KLHDC4-216ENST00000566561 TBC1D2BQ9UPU7 963 aa16.34■□□□□ 0.21
KLHDC4-216ENST00000566561 SIPA1L3O60292 1781 aaPredicted RBP16.33■□□□□ 0.21
KLHDC4-216ENST00000566561 DLEC1Q9Y238 1755 aa16.33■□□□□ 0.21
KLHDC4-216ENST00000566561 SERPINB2P05120 415 aa16.33■□□□□ 0.2
KLHDC4-216ENST00000566561 PNISRQ8TF01 805 aaKnown RBP16.33■□□□□ 0.2
KLHDC4-216ENST00000566561 KLRG1Q96E93 195 aa16.33■□□□□ 0.2
KLHDC4-216ENST00000566561 THUMPD2Q9BTF0 503 aaKnown RBP16.33■□□□□ 0.2
KLHDC4-216ENST00000566561 TIAM2Q8IVF5 1701 aa16.33■□□□□ 0.2
KLHDC4-216ENST00000566561 AFDNP55196 1824 aaKnown RBP16.33■□□□□ 0.2
KLHDC4-216ENST00000566561 CCDC88AQ3V6T2 1871 aa16.33■□□□□ 0.2
KLHDC4-216ENST00000566561 PIP4K2AP48426 406 aaPredicted RBP16.32■□□□□ 0.2
KLHDC4-216ENST00000566561 WDR43Q15061 677 aaKnown RBP eCLIP16.32■□□□□ 0.2
KLHDC4-216ENST00000566561 DALRD3Q5D0E6 543 aaKnown RBP16.32■□□□□ 0.2
KLHDC4-216ENST00000566561 RNF181Q9P0P0 153 aa16.32■□□□□ 0.2
KLHDC4-216ENST00000566561 KCNA3P22001 575 aa16.31■□□□□ 0.2
KLHDC4-216ENST00000566561 CHRNA5P30532 468 aa16.31■□□□□ 0.2
KLHDC4-216ENST00000566561 RIPK4P57078 832 aa16.31■□□□□ 0.2
KLHDC4-216ENST00000566561 TBC1D9BQ66K14 1250 aa16.31■□□□□ 0.2
KLHDC4-216ENST00000566561 DZIP3Q86Y13 1208 aaKnown RBP16.31■□□□□ 0.2
KLHDC4-216ENST00000566561 CCDC146Q8IYE0 955 aa16.29■□□□□ 0.2
KLHDC4-216ENST00000566561 JMYQ8N9B5 988 aa16.29■□□□□ 0.2
KLHDC4-216ENST00000566561 PRKRIP1Q9H875 184 aaPredicted RBP16.29■□□□□ 0.2
KLHDC4-216ENST00000566561 ZC3H4Q9UPT8 1303 aaKnown RBP16.28■□□□□ 0.2
KLHDC4-216ENST00000566561 NPHP1O15259 732 aa16.28■□□□□ 0.2
KLHDC4-216ENST00000566561 CAMTA2O94983 1202 aa16.28■□□□□ 0.2
KLHDC4-216ENST00000566561 TMPOP42166 694 aaKnown RBP16.28■□□□□ 0.2
KLHDC4-216ENST00000566561 HTRA3P83110 453 aa16.28■□□□□ 0.2
KLHDC4-216ENST00000566561 NRXN2Q9P2S2 1712 aa16.28■□□□□ 0.2
KLHDC4-216ENST00000566561 EIF4A1P60842 406 aaKnown RBP16.27■□□□□ 0.2
KLHDC4-216ENST00000566561 LMOD3Q0VAK6 560 aa16.27■□□□□ 0.2
KLHDC4-216ENST00000566561 NEUROD2Q15784 382 aa16.27■□□□□ 0.2
KLHDC4-216ENST00000566561 SMC1BQ8NDV3 1235 aa16.27■□□□□ 0.2
KLHDC4-216ENST00000566561 SETDB2Q96T68 719 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms