RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 NUCB1Q02818 461 aa14.24□□□□□ -0.13
LINC00562-201ENST00000566385 BEND3Q5T5X7 828 aa14.24□□□□□ -0.13
LINC00562-201ENST00000566385 SPATA31A1Q5TZJ5 1347 aa14.24□□□□□ -0.13
LINC00562-201ENST00000566385 ANKRD45Q5TZF3 282 aa14.24□□□□□ -0.13
LINC00562-201ENST00000566385 BCL11AQ9H165 835 aa14.24□□□□□ -0.13
LINC00562-201ENST00000566385 MAP3K2Q9Y2U5 619 aa14.24□□□□□ -0.13
LINC00562-201ENST00000566385 N4BP2Q86UW6 1770 aaPredicted RBP14.24□□□□□ -0.13
LINC00562-201ENST00000566385 LRP10Q7Z4F1 713 aa14.23□□□□□ -0.13
LINC00562-201ENST00000566385 EXOC5O00471 708 aa14.23□□□□□ -0.13
LINC00562-201ENST00000566385 NBPF7P0C2Y1 421 aaPredicted RBP14.23□□□□□ -0.13
LINC00562-201ENST00000566385 CHD1LQ86WJ1 897 aa14.23□□□□□ -0.13
LINC00562-201ENST00000566385 CERKQ8TCT0 537 aa14.23□□□□□ -0.13
LINC00562-201ENST00000566385 PIGBQ92521 554 aa14.23□□□□□ -0.13
LINC00562-201ENST00000566385 CHMP4AQ9BY43 222 aa14.23□□□□□ -0.13
LINC00562-201ENST00000566385 SRCIN1Q9C0H9 1055 aa14.23□□□□□ -0.13
LINC00562-201ENST00000566385 HYPKQ9NX55 129 aa14.23□□□□□ -0.13
LINC00562-201ENST00000566385 ASAP1Q9ULH1 1129 aa14.23□□□□□ -0.13
LINC00562-201ENST00000566385 UBR2Q8IWV8 1755 aa14.22□□□□□ -0.13
LINC00562-201ENST00000566385 CWF19L2Q2TBE0 894 aaKnown RBP14.22□□□□□ -0.13
LINC00562-201ENST00000566385 FAM161AQ3B820 660 aa14.22□□□□□ -0.13
LINC00562-201ENST00000566385 RPAP2Q8IXW5 612 aaPredicted RBP14.22□□□□□ -0.13
LINC00562-201ENST00000566385 GCC1Q96CN9 775 aa14.22□□□□□ -0.13
LINC00562-201ENST00000566385 C8orf37Q96NL8 207 aa14.22□□□□□ -0.13
LINC00562-201ENST00000566385 PXDNLA1KZ92 1463 aa14.22□□□□□ -0.13
LINC00562-201ENST00000566385 SLIT2O94813 1529 aa14.22□□□□□ -0.13
LINC00562-201ENST00000566385 KCPQ6ZWJ8 1503 aa14.22□□□□□ -0.13
LINC00562-201ENST00000566385 GNAI2P04899 355 aa14.22□□□□□ -0.13
LINC00562-201ENST00000566385 COPS6Q7L5N1 327 aa14.22□□□□□ -0.13
LINC00562-201ENST00000566385 DCTPP1Q9H773 170 aa14.22□□□□□ -0.13
LINC00562-201ENST00000566385 TMOD3Q9NYL9 352 aa14.22□□□□□ -0.13
LINC00562-201ENST00000566385 CCDC9Q9Y3X0 531 aaKnown RBP14.22□□□□□ -0.13
LINC00562-201ENST00000566385 LRRFIP2Q9Y608 721 aaKnown RBP14.22□□□□□ -0.13
LINC00562-201ENST00000566385 ITGB4P16144 1822 aa14.22□□□□□ -0.13
LINC00562-201ENST00000566385 WNK3Q9BYP7 1800 aa14.22□□□□□ -0.13
LINC00562-201ENST00000566385 PNMA6EA0A0J9YXQ4 647 aa14.21□□□□□ -0.13
LINC00562-201ENST00000566385 KSR2Q6VAB6 950 aa14.21□□□□□ -0.13
LINC00562-201ENST00000566385 XAGE3Q8WTP9 111 aa14.21□□□□□ -0.13
LINC00562-201ENST00000566385 PAPPAQ13219 1627 aa14.21□□□□□ -0.13
LINC00562-201ENST00000566385 APBB1O00213 710 aa14.21□□□□□ -0.13
LINC00562-201ENST00000566385 NBPF26B4DH59 902 aa14.2□□□□□ -0.14
LINC00562-201ENST00000566385 GNAI3P08754 354 aa14.2□□□□□ -0.14
LINC00562-201ENST00000566385 NBPF14Q5TI25 921 aa14.2□□□□□ -0.14
LINC00562-201ENST00000566385 NBPF10Q6P3W6 841 aaKnown RBP14.2□□□□□ -0.14
LINC00562-201ENST00000566385 NBPF15Q8N660 670 aa14.2□□□□□ -0.14
LINC00562-201ENST00000566385 SPATA31A5Q5VU36 1347 aa14.2□□□□□ -0.14
LINC00562-201ENST00000566385 SPATA31A7Q8IWB4 1347 aa14.2□□□□□ -0.14
LINC00562-201ENST00000566385 A1BGP04217 495 aa14.2□□□□□ -0.14
LINC00562-201ENST00000566385 SYTL4Q96C24 671 aaPredicted RBP14.2□□□□□ -0.14
LINC00562-201ENST00000566385 NGLY1Q96IV0 654 aa14.2□□□□□ -0.14
LINC00562-201ENST00000566385 EP400Q96L91 3159 aa14.2□□□□□ -0.14
LINC00562-201ENST00000566385 SEC24BO95487 1268 aa14.19□□□□□ -0.14
LINC00562-201ENST00000566385 UBTFL1P0CB47 393 aaPredicted RBP14.19□□□□□ -0.14
LINC00562-201ENST00000566385 NPM2Q86SE8 214 aaKnown RBP14.19□□□□□ -0.14
LINC00562-201ENST00000566385 JCADQ9P266 1359 aa14.19□□□□□ -0.14
LINC00562-201ENST00000566385 TNS2Q63HR2 1409 aa14.19□□□□□ -0.14
LINC00562-201ENST00000566385 C16orf71Q8IYS4 520 aaPredicted RBP14.19□□□□□ -0.14
LINC00562-201ENST00000566385 ATG3Q9NT62 314 aa14.19□□□□□ -0.14
LINC00562-201ENST00000566385 NWD2Q9ULI1 1742 aa14.18□□□□□ -0.14
LINC00562-201ENST00000566385 BCL9LQ86UU0 1499 aa14.18□□□□□ -0.14
LINC00562-201ENST00000566385 SMARCA5O60264 1052 aaPredicted RBP14.18□□□□□ -0.14
LINC00562-201ENST00000566385 DDB1Q16531 1140 aa14.18□□□□□ -0.14
LINC00562-201ENST00000566385 LAMB4A4D0S4 1761 aa14.18□□□□□ -0.14
LINC00562-201ENST00000566385 LRP6O75581 1613 aa14.18□□□□□ -0.14
LINC00562-201ENST00000566385 IGKV5-2P06315 115 aa14.18□□□□□ -0.14
LINC00562-201ENST00000566385 RIC3Q7Z5B4 369 aa14.18□□□□□ -0.14
LINC00562-201ENST00000566385 PRIM1P49642 420 aaKnown RBP14.17□□□□□ -0.14
LINC00562-201ENST00000566385 UNC5CLQ8IV45 518 aa14.17□□□□□ -0.14
LINC00562-201ENST00000566385 MARCH10Q8NA82 808 aaPredicted RBP14.17□□□□□ -0.14
LINC00562-201ENST00000566385 EXOC6BQ9Y2D4 811 aa14.17□□□□□ -0.14
LINC00562-201ENST00000566385 THRAP3Q9Y2W1 955 aaKnown RBP14.17□□□□□ -0.14
LINC00562-201ENST00000566385 HSPA1LP34931 641 aa14.17□□□□□ -0.14
LINC00562-201ENST00000566385 FAM98CQ17RN3 349 aaKnown RBP14.17□□□□□ -0.14
LINC00562-201ENST00000566385 ANKRD13DQ6ZTN6 518 aa14.17□□□□□ -0.14
LINC00562-201ENST00000566385 SLC4A9Q96Q91 983 aa14.17□□□□□ -0.14
LINC00562-201ENST00000566385 BCL9O00512 1426 aa14.16□□□□□ -0.14
LINC00562-201ENST00000566385 ATP8B2P98198 1209 aa14.16□□□□□ -0.14
LINC00562-201ENST00000566385 OTUD7AQ8TE49 926 aaPredicted RBP14.16□□□□□ -0.14
LINC00562-201ENST00000566385 ACSBG1Q96GR2 724 aa14.16□□□□□ -0.14
LINC00562-201ENST00000566385 DDX58O95786 925 aaKnown RBP14.16□□□□□ -0.14
LINC00562-201ENST00000566385 RBM42Q9BTD8 480 aaKnown RBP14.16□□□□□ -0.14
LINC00562-201ENST00000566385 DOT1LQ8TEK3 1739 aa14.15□□□□□ -0.14
LINC00562-201ENST00000566385 TTLL7Q6ZT98 887 aa14.15□□□□□ -0.14
LINC00562-201ENST00000566385 LINS1Q8NG48 757 aa14.15□□□□□ -0.14
LINC00562-201ENST00000566385 MYD88Q99836 296 aa14.15□□□□□ -0.14
LINC00562-201ENST00000566385 A0A0G2JS52 829 aa14.15□□□□□ -0.14
LINC00562-201ENST00000566385 PPP1R42Q7Z4L9 355 aa14.15□□□□□ -0.14
LINC00562-201ENST00000566385 DNAJC10Q8IXB1 793 aa14.15□□□□□ -0.14
LINC00562-201ENST00000566385 C9orf78Q9NZ63 289 aaPredicted RBP14.15□□□□□ -0.14
LINC00562-201ENST00000566385 MSH5O43196 834 aa14.14□□□□□ -0.15
LINC00562-201ENST00000566385 HMMRO75330 724 aa14.14□□□□□ -0.15
LINC00562-201ENST00000566385 JARID2Q92833 1246 aaPredicted RBP14.14□□□□□ -0.15
LINC00562-201ENST00000566385 ATP5J2-PTCD1G3V325 749 aa14.14□□□□□ -0.15
LINC00562-201ENST00000566385 ALDH1L1O75891 902 aa14.14□□□□□ -0.15
LINC00562-201ENST00000566385 BARGINQ6ZT62 677 aa14.14□□□□□ -0.15
LINC00562-201ENST00000566385 FNBP4Q8N3X1 1017 aaPredicted RBP14.14□□□□□ -0.15
LINC00562-201ENST00000566385 KAZALD1Q96I82 304 aa14.14□□□□□ -0.15
LINC00562-201ENST00000566385 METTL22Q9BUU2 404 aaPredicted RBP14.14□□□□□ -0.15
LINC00562-201ENST00000566385 CDCA7Q9BWT1 371 aaPredicted RBP14.14□□□□□ -0.15
LINC00562-201ENST00000566385 NEURL1BA8MQ27 555 aa14.13□□□□□ -0.15
LINC00562-201ENST00000566385 ARFGEF2Q9Y6D5 1785 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms