RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 VSIG10Q8N0Z9 540 aa22.28■■□□□ 1.16
TSR3-202ENST00000566296 ZBTB1Q9Y2K1 713 aa22.28■■□□□ 1.16
TSR3-202ENST00000566296 CEP350Q5VT06 3117 aa22.27■■□□□ 1.16
TSR3-202ENST00000566296 AFDNP55196 1824 aaKnown RBP22.27■■□□□ 1.16
TSR3-202ENST00000566296 TM4SF1P30408 202 aa22.27■■□□□ 1.16
TSR3-202ENST00000566296 CHRNA5P30532 468 aa22.27■■□□□ 1.16
TSR3-202ENST00000566296 C9orf131Q5VYM1 1079 aa22.27■■□□□ 1.16
TSR3-202ENST00000566296 NARFQ9UHQ1 456 aa22.27■■□□□ 1.16
TSR3-202ENST00000566296 U2SURPO15042 1029 aaKnown RBP22.26■■□□□ 1.15
TSR3-202ENST00000566296 TOMM70O94826 608 aa22.25■■□□□ 1.15
TSR3-202ENST00000566296 CNGB1Q14028 1251 aaPredicted RBP22.25■■□□□ 1.15
TSR3-202ENST00000566296 GAS2L2Q8NHY3 880 aa22.25■■□□□ 1.15
TSR3-202ENST00000566296 NRXN2Q9P2S2 1712 aa22.25■■□□□ 1.15
TSR3-202ENST00000566296 NFIXQ14938 502 aa22.24■■□□□ 1.15
TSR3-202ENST00000566296 STARD3NLO95772 234 aa22.23■■□□□ 1.15
TSR3-202ENST00000566296 TEFQ10587 303 aa22.23■■□□□ 1.15
TSR3-202ENST00000566296 NMRK2Q9NPI5 230 aa22.23■■□□□ 1.15
TSR3-202ENST00000566296 RNF181Q9P0P0 153 aa22.23■■□□□ 1.15
TSR3-202ENST00000566296 DLEC1Q9Y238 1755 aa22.22■■□□□ 1.15
TSR3-202ENST00000566296 CANXP27824 592 aaKnown RBP22.22■■□□□ 1.15
TSR3-202ENST00000566296 SIPA1L3O60292 1781 aaPredicted RBP22.21■■□□□ 1.15
TSR3-202ENST00000566296 A0A087WZG4 1122 aa22.21■■□□□ 1.15
TSR3-202ENST00000566296 GNAT3A8MTJ3 354 aa22.21■■□□□ 1.15
TSR3-202ENST00000566296 APLP1P51693 650 aa22.21■■□□□ 1.15
TSR3-202ENST00000566296 C16orf71Q8IYS4 520 aaPredicted RBP22.21■■□□□ 1.15
TSR3-202ENST00000566296 KDM2BQ8NHM5 1336 aa22.21■■□□□ 1.15
TSR3-202ENST00000566296 SBF1O95248 1867 aa22.2■■□□□ 1.14
TSR3-202ENST00000566296 SERPINB2P05120 415 aa22.2■■□□□ 1.14
TSR3-202ENST00000566296 SCN7AQ01118 1682 aa22.2■■□□□ 1.14
TSR3-202ENST00000566296 BCL2L12Q9HB09 334 aa22.19■■□□□ 1.14
TSR3-202ENST00000566296 HEG1Q9ULI3 1381 aa22.19■■□□□ 1.14
TSR3-202ENST00000566296 TNRC6CQ9HCJ0 1690 aaKnown RBP22.19■■□□□ 1.14
TSR3-202ENST00000566296 ZNF790Q6PG37 636 aa22.18■■□□□ 1.14
TSR3-202ENST00000566296 CFAP53Q96M91 514 aa22.18■■□□□ 1.14
TSR3-202ENST00000566296 TEX13AQ9BXU3 409 aaPredicted RBP22.18■■□□□ 1.14
TSR3-202ENST00000566296 EIF5P55010 431 aaKnown RBP22.17■■□□□ 1.14
TSR3-202ENST00000566296 RBM46Q8TBY0 533 aaKnown RBP22.17■■□□□ 1.14
TSR3-202ENST00000566296 ZNF496Q96IT1 587 aaPredicted RBP22.17■■□□□ 1.14
TSR3-202ENST00000566296 BICDL1Q6ZP65 573 aa22.16■■□□□ 1.14
TSR3-202ENST00000566296 NPM2Q86SE8 214 aaKnown RBP22.16■■□□□ 1.14
TSR3-202ENST00000566296 IL17REQ8NFR9 667 aa22.16■■□□□ 1.14
TSR3-202ENST00000566296 ZNF330Q9Y3S2 320 aaPredicted RBP22.16■■□□□ 1.14
TSR3-202ENST00000566296 CARMIL3Q8ND23 1372 aa22.15■■□□□ 1.14
TSR3-202ENST00000566296 ZC3H4Q9UPT8 1303 aaKnown RBP22.15■■□□□ 1.14
TSR3-202ENST00000566296 RASSF7Q02833 373 aa22.15■■□□□ 1.14
TSR3-202ENST00000566296 C2CD5Q86YS7 1000 aa22.15■■□□□ 1.14
TSR3-202ENST00000566296 TTLL6Q8N841 843 aa22.15■■□□□ 1.14
TSR3-202ENST00000566296 FMNL2Q96PY5 1086 aa22.15■■□□□ 1.14
TSR3-202ENST00000566296 H0YIN7 160 aa22.14■■□□□ 1.13
TSR3-202ENST00000566296 PRKAR2BP31323 418 aa22.14■■□□□ 1.13
TSR3-202ENST00000566296 IFFO2Q5TF58 517 aa22.14■■□□□ 1.13
TSR3-202ENST00000566296 WDR90Q96KV7 1748 aa22.14■■□□□ 1.13
TSR3-202ENST00000566296 CEMIPQ8WUJ3 1361 aa22.13■■□□□ 1.13
TSR3-202ENST00000566296 NUDCQ9Y266 331 aa22.13■■□□□ 1.13
TSR3-202ENST00000566296 IL6STP40189 918 aaPredicted RBP22.12■■□□□ 1.13
TSR3-202ENST00000566296 TIAM2Q8IVF5 1701 aa22.11■■□□□ 1.13
TSR3-202ENST00000566296 LMNB1P20700 586 aa22.11■■□□□ 1.13
TSR3-202ENST00000566296 FSTL1Q12841 308 aa22.11■■□□□ 1.13
TSR3-202ENST00000566296 TBC1D9BQ66K14 1250 aa22.11■■□□□ 1.13
TSR3-202ENST00000566296 RSPH6AQ9H0K4 717 aa22.11■■□□□ 1.13
TSR3-202ENST00000566296 PDZRN3Q9UPQ7 1066 aa22.11■■□□□ 1.13
TSR3-202ENST00000566296 ANKRD31Q8N7Z5 1873 aa22.11■■□□□ 1.13
TSR3-202ENST00000566296 BTBD11A6QL63 1104 aa22.1■■□□□ 1.13
TSR3-202ENST00000566296 ZEB1P37275 1124 aaPredicted RBP22.1■■□□□ 1.13
TSR3-202ENST00000566296 RRAGCQ9HB90 399 aa22.1■■□□□ 1.13
TSR3-202ENST00000566296 TBC1D2BQ9UPU7 963 aa22.1■■□□□ 1.13
TSR3-202ENST00000566296 BCORQ6W2J9 1755 aa22.1■■□□□ 1.13
TSR3-202ENST00000566296 CCDC88AQ3V6T2 1871 aa22.09■■□□□ 1.13
TSR3-202ENST00000566296 NPHP1O15259 732 aa22.09■■□□□ 1.13
TSR3-202ENST00000566296 COL11A2P13942 1736 aaPredicted RBP22.09■■□□□ 1.13
TSR3-202ENST00000566296 PDE6BP35913 854 aa22.08■■□□□ 1.13
TSR3-202ENST00000566296 RTF1Q92541 710 aaKnown RBP22.08■■□□□ 1.13
TSR3-202ENST00000566296 PHACTR3Q96KR7 559 aa22.08■■□□□ 1.13
TSR3-202ENST00000566296 A1BGP04217 495 aa22.07■■□□□ 1.12
TSR3-202ENST00000566296 U2AF1L5P0DN76 240 aaPredicted RBP22.07■■□□□ 1.12
TSR3-202ENST00000566296 U2AF1Q01081 240 aaKnown RBP eCLIP22.07■■□□□ 1.12
TSR3-202ENST00000566296 PRR5LQ6MZQ0 368 aa22.07■■□□□ 1.12
TSR3-202ENST00000566296 ZNF622Q969S3 477 aaKnown RBP eCLIP22.07■■□□□ 1.12
TSR3-202ENST00000566296 BRIP1Q9BX63 1249 aa22.07■■□□□ 1.12
TSR3-202ENST00000566296 CNBD1Q8NA66 436 aa22.06■■□□□ 1.12
TSR3-202ENST00000566296 SETDB2Q96T68 719 aa22.06■■□□□ 1.12
TSR3-202ENST00000566296 KCNQ3O43525 872 aa22.05■■□□□ 1.12
TSR3-202ENST00000566296 CAMTA2O94983 1202 aa22.05■■□□□ 1.12
TSR3-202ENST00000566296 ST5P78524 1137 aa22.05■■□□□ 1.12
TSR3-202ENST00000566296 DZIP3Q86Y13 1208 aaKnown RBP22.05■■□□□ 1.12
TSR3-202ENST00000566296 SMC1BQ8NDV3 1235 aa22.05■■□□□ 1.12
TSR3-202ENST00000566296 GLTPD2A6NH11 291 aa22.04■■□□□ 1.12
TSR3-202ENST00000566296 NFKBIEO00221 500 aa22.04■■□□□ 1.12
TSR3-202ENST00000566296 PPP2R1AP30153 589 aa22.04■■□□□ 1.12
TSR3-202ENST00000566296 CACNA1SQ13698 1873 aa22.03■■□□□ 1.12
TSR3-202ENST00000566296 CCDC24Q8N4L8 307 aa22.03■■□□□ 1.12
TSR3-202ENST00000566296 DNAJC5GQ8N7S2 189 aa22.03■■□□□ 1.12
TSR3-202ENST00000566296 FER1L6Q2WGJ9 1857 aa22.03■■□□□ 1.12
TSR3-202ENST00000566296 PRELPP51888 382 aa22.02■■□□□ 1.12
TSR3-202ENST00000566296 DICER1Q9UPY3 1922 aaKnown RBP22.02■■□□□ 1.11
TSR3-202ENST00000566296 SNRPA1P09661 255 aaKnown RBP22.01■■□□□ 1.11
TSR3-202ENST00000566296 VEGFAP15692 232 aaPredicted RBP22.01■■□□□ 1.11
TSR3-202ENST00000566296 ZNF219Q9P2Y4 722 aaPredicted RBP22.01■■□□□ 1.11
TSR3-202ENST00000566296 ZNF652Q9Y2D9 606 aa22.01■■□□□ 1.11
TSR3-202ENST00000566296 ARFGEF2Q9Y6D5 1785 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms