RNA–Protein interactions for RNA: ENST00000566259.1

CPNE2-207, Transcript of copine 2, humanhuman

TSL 3

Gene CPNE2, Length 404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-207ENST00000566259 ATG3Q9NT62 314 aa21.72■■□□□ 1.07
CPNE2-207ENST00000566259 CCDC27Q2M243 656 aa21.71■■□□□ 1.07
CPNE2-207ENST00000566259 MTHFSDQ2M296 383 aaKnown RBP21.71■■□□□ 1.07
CPNE2-207ENST00000566259 TNS4Q8IZW8 715 aa21.71■■□□□ 1.07
CPNE2-207ENST00000566259 GAS2L2Q8NHY3 880 aa21.71■■□□□ 1.07
CPNE2-207ENST00000566259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.71■■□□□ 1.07
CPNE2-207ENST00000566259 RRP7AQ9Y3A4 280 aaKnown RBP21.71■■□□□ 1.07
CPNE2-207ENST00000566259 KDM2BQ8NHM5 1336 aa21.71■■□□□ 1.07
CPNE2-207ENST00000566259 AMOTQ4VCS5 1084 aa21.7■■□□□ 1.06
CPNE2-207ENST00000566259 ZNF521Q96K83 1311 aa21.7■■□□□ 1.06
CPNE2-207ENST00000566259 ZNF831Q5JPB2 1677 aa21.69■■□□□ 1.06
CPNE2-207ENST00000566259 GYS1P13807 737 aa21.69■■□□□ 1.06
CPNE2-207ENST00000566259 ADRA2BP18089 450 aa21.69■■□□□ 1.06
CPNE2-207ENST00000566259 KCNA3P22001 575 aa21.69■■□□□ 1.06
CPNE2-207ENST00000566259 PRELPP51888 382 aa21.69■■□□□ 1.06
CPNE2-207ENST00000566259 IFNL2Q8IZJ0 200 aa21.69■■□□□ 1.06
CPNE2-207ENST00000566259 ARHGEF1Q92888 912 aaKnown RBP21.69■■□□□ 1.06
CPNE2-207ENST00000566259 PARP3Q9Y6F1 533 aa21.69■■□□□ 1.06
CPNE2-207ENST00000566259 TNRC6CQ9HCJ0 1690 aaKnown RBP21.69■■□□□ 1.06
CPNE2-207ENST00000566259 PHKG2P15735 406 aa21.68■■□□□ 1.06
CPNE2-207ENST00000566259 PLEKHO1Q53GL0 409 aaPredicted RBP21.68■■□□□ 1.06
CPNE2-207ENST00000566259 COL5A3P25940 1745 aaPredicted RBP21.67■■□□□ 1.06
CPNE2-207ENST00000566259 RIPK4P57078 832 aa21.67■■□□□ 1.06
CPNE2-207ENST00000566259 DCAF5Q96JK2 942 aa21.67■■□□□ 1.06
CPNE2-207ENST00000566259 SLC4A9Q96Q91 983 aa21.67■■□□□ 1.06
CPNE2-207ENST00000566259 PIM2Q9P1W9 311 aa21.67■■□□□ 1.06
CPNE2-207ENST00000566259 TRIM35Q9UPQ4 493 aa21.67■■□□□ 1.06
CPNE2-207ENST00000566259 CNTNAP4Q9C0A0 1308 aa21.66■■□□□ 1.06
CPNE2-207ENST00000566259 RFC4P35249 363 aa21.66■■□□□ 1.06
CPNE2-207ENST00000566259 NEUROD2Q15784 382 aa21.66■■□□□ 1.06
CPNE2-207ENST00000566259 RC3H1Q5TC82 1133 aaKnown RBP21.66■■□□□ 1.06
CPNE2-207ENST00000566259 WWC1Q8IX03 1113 aa21.66■■□□□ 1.06
CPNE2-207ENST00000566259 RRAGCQ9HB90 399 aa21.66■■□□□ 1.06
CPNE2-207ENST00000566259 RNF181Q9P0P0 153 aa21.66■■□□□ 1.06
CPNE2-207ENST00000566259 SALL2Q9Y467 1007 aaPredicted RBP21.66■■□□□ 1.06
CPNE2-207ENST00000566259 RPS6KA4O75676 772 aa21.64■■□□□ 1.05
CPNE2-207ENST00000566259 LMOD3Q0VAK6 560 aa21.64■■□□□ 1.05
CPNE2-207ENST00000566259 DALRD3Q5D0E6 543 aaKnown RBP21.64■■□□□ 1.05
CPNE2-207ENST00000566259 SMC1BQ8NDV3 1235 aa21.64■■□□□ 1.05
CPNE2-207ENST00000566259 ZNF530Q6P9A1 599 aaPredicted RBP21.63■■□□□ 1.05
CPNE2-207ENST00000566259 RBM42Q9BTD8 480 aaKnown RBP21.63■■□□□ 1.05
CPNE2-207ENST00000566259 SBF1O95248 1867 aa21.62■■□□□ 1.05
CPNE2-207ENST00000566259 HTATSF1O43719 755 aaKnown RBP21.62■■□□□ 1.05
CPNE2-207ENST00000566259 AKAP4Q5JQC9 854 aa21.62■■□□□ 1.05
CPNE2-207ENST00000566259 DLG5Q8TDM6 1919 aa21.62■■□□□ 1.05
CPNE2-207ENST00000566259 GNAT3A8MTJ3 354 aa21.61■■□□□ 1.05
CPNE2-207ENST00000566259 MYH14Q7Z406 1995 aaKnown RBP21.61■■□□□ 1.05
CPNE2-207ENST00000566259 ADAMTS7Q9UKP4 1686 aa21.6■■□□□ 1.05
CPNE2-207ENST00000566259 ERVV-2B6SEH9 535 aa21.59■■□□□ 1.05
CPNE2-207ENST00000566259 C1orf141Q5JVX7 400 aa21.59■■□□□ 1.05
CPNE2-207ENST00000566259 WDR63Q8IWG1 891 aa21.59■■□□□ 1.05
CPNE2-207ENST00000566259 HSPA1AP0DMV8 641 aaKnown RBP21.58■■□□□ 1.05
CPNE2-207ENST00000566259 HSPA1BP0DMV9 641 aaKnown RBP21.58■■□□□ 1.05
CPNE2-207ENST00000566259 CEMIPQ8WUJ3 1361 aa21.58■■□□□ 1.04
CPNE2-207ENST00000566259 ZC3H4Q9UPT8 1303 aaKnown RBP21.57■■□□□ 1.04
CPNE2-207ENST00000566259 CHRNA5P30532 468 aa21.57■■□□□ 1.04
CPNE2-207ENST00000566259 DDR1Q08345 913 aa21.57■■□□□ 1.04
CPNE2-207ENST00000566259 IL16Q14005 1332 aa21.56■■□□□ 1.04
CPNE2-207ENST00000566259 KDM6AO15550 1401 aaPredicted RBP21.56■■□□□ 1.04
CPNE2-207ENST00000566259 GOLGA2Q08379 1002 aa21.56■■□□□ 1.04
CPNE2-207ENST00000566259 DCTN1Q14203 1278 aa21.56■■□□□ 1.04
CPNE2-207ENST00000566259 FKBP8Q14318 412 aa21.56■■□□□ 1.04
CPNE2-207ENST00000566259 RTF1Q92541 710 aaKnown RBP21.56■■□□□ 1.04
CPNE2-207ENST00000566259 THUMPD2Q9BTF0 503 aaKnown RBP21.56■■□□□ 1.04
CPNE2-207ENST00000566259 USP42Q9H9J4 1324 aaKnown RBP21.55■■□□□ 1.04
CPNE2-207ENST00000566259 MCM10Q7L590 875 aa21.55■■□□□ 1.04
CPNE2-207ENST00000566259 IL17REQ8NFR9 667 aa21.55■■□□□ 1.04
CPNE2-207ENST00000566259 SRP68Q9UHB9 627 aaKnown RBP21.55■■□□□ 1.04
CPNE2-207ENST00000566259 HSP90AB1P08238 724 aaKnown RBP21.54■■□□□ 1.04
CPNE2-207ENST00000566259 CALD1Q05682 793 aaKnown RBP21.54■■□□□ 1.04
CPNE2-207ENST00000566259 CRKLP46109 303 aaKnown RBP21.53■■□□□ 1.04
CPNE2-207ENST00000566259 CDCA7LQ96GN5 454 aa21.53■■□□□ 1.04
CPNE2-207ENST00000566259 SPINK5Q9NQ38 1064 aaPredicted RBP21.53■■□□□ 1.04
CPNE2-207ENST00000566259 MRC1P22897 1456 aa21.52■■□□□ 1.04
CPNE2-207ENST00000566259 E9PSI1 815 aa21.52■■□□□ 1.04
CPNE2-207ENST00000566259 RNMTO43148 476 aaKnown RBP21.52■■□□□ 1.04
CPNE2-207ENST00000566259 VEGFAP15692 232 aaPredicted RBP21.52■■□□□ 1.04
CPNE2-207ENST00000566259 RASSF7Q02833 373 aa21.52■■□□□ 1.04
CPNE2-207ENST00000566259 SLFN5Q08AF3 891 aa21.52■■□□□ 1.04
CPNE2-207ENST00000566259 POLRMTO00411 1230 aaKnown RBP21.51■■□□□ 1.03
CPNE2-207ENST00000566259 TRMT2AQ8IZ69 625 aaKnown RBP21.51■■□□□ 1.03
CPNE2-207ENST00000566259 LGR6Q9HBX8 967 aa21.51■■□□□ 1.03
CPNE2-207ENST00000566259 GLTPD2A6NH11 291 aa21.5■■□□□ 1.03
CPNE2-207ENST00000566259 PTCD1O75127 700 aaKnown RBP21.5■■□□□ 1.03
CPNE2-207ENST00000566259 ZNF853P0CG23 659 aa21.5■■□□□ 1.03
CPNE2-207ENST00000566259 CABP4P57796 275 aa21.5■■□□□ 1.03
CPNE2-207ENST00000566259 IFT57Q9NWB7 429 aa21.5■■□□□ 1.03
CPNE2-207ENST00000566259 TJP1Q07157 1748 aa21.49■■□□□ 1.03
CPNE2-207ENST00000566259 SCN11AQ9UI33 1791 aa21.49■■□□□ 1.03
CPNE2-207ENST00000566259 LMNB1P20700 586 aa21.49■■□□□ 1.03
CPNE2-207ENST00000566259 TM4SF1P30408 202 aa21.48■■□□□ 1.03
CPNE2-207ENST00000566259 DUSP27Q5VZP5 1158 aa21.48■■□□□ 1.03
CPNE2-207ENST00000566259 CFAP44Q96MT7 982 aa21.48■■□□□ 1.03
CPNE2-207ENST00000566259 TIAM2Q8IVF5 1701 aa21.48■■□□□ 1.03
CPNE2-207ENST00000566259 GNAI1P63096 354 aa21.47■■□□□ 1.03
CPNE2-207ENST00000566259 CHL1O00533 1208 aa21.46■■□□□ 1.03
CPNE2-207ENST00000566259 MYH16Q9H6N6 1097 aa21.46■■□□□ 1.03
CPNE2-207ENST00000566259 FANCIQ9NVI1 1328 aa21.46■■□□□ 1.03
CPNE2-207ENST00000566259 DLEC1Q9Y238 1755 aa21.46■■□□□ 1.03
CPNE2-207ENST00000566259 BABAM1Q9NWV8 329 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms