RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 A0A0G2JS52 829 aa13.05□□□□□ -0.32
CFDP1-206ENST00000566254 MYT1Q01538 1121 aa13.05□□□□□ -0.32
CFDP1-206ENST00000566254 RETREG3Q86VR2 466 aa13.05□□□□□ -0.32
CFDP1-206ENST00000566254 PRR7Q8TB68 274 aa13.05□□□□□ -0.32
CFDP1-206ENST00000566254 TSC1Q92574 1164 aa13.05□□□□□ -0.32
CFDP1-206ENST00000566254 WNT2BQ93097 391 aa13.05□□□□□ -0.32
CFDP1-206ENST00000566254 HMX1Q9NP08 348 aaPredicted RBP13.05□□□□□ -0.32
CFDP1-206ENST00000566254 TSR3Q9UJK0 312 aaKnown RBP13.05□□□□□ -0.32
CFDP1-206ENST00000566254 APLP1P51693 650 aa13.04□□□□□ -0.32
CFDP1-206ENST00000566254 R3HDM1Q15032 1099 aaKnown RBP13.04□□□□□ -0.32
CFDP1-206ENST00000566254 Q3C1V9 767 aa13.04□□□□□ -0.32
CFDP1-206ENST00000566254 ZNF330Q9Y3S2 320 aaPredicted RBP13.04□□□□□ -0.32
CFDP1-206ENST00000566254 KIF1BO60333 1816 aa13.04□□□□□ -0.32
CFDP1-206ENST00000566254 ABL2P42684 1182 aa13.03□□□□□ -0.32
CFDP1-206ENST00000566254 WAPLQ7Z5K2 1190 aa13.03□□□□□ -0.32
CFDP1-206ENST00000566254 CCDC82Q8N4S0 544 aa13.03□□□□□ -0.32
CFDP1-206ENST00000566254 LRRN4Q8WUT4 740 aa13.03□□□□□ -0.32
CFDP1-206ENST00000566254 KRT28Q7Z3Y7 464 aa13.02□□□□□ -0.33
CFDP1-206ENST00000566254 TRIM34Q9BYJ4 488 aa13.02□□□□□ -0.33
CFDP1-206ENST00000566254 KRTAP3-3Q9BYR6 98 aa13.02□□□□□ -0.33
CFDP1-206ENST00000566254 KRTAP3-2Q9BYR7 98 aa13.02□□□□□ -0.33
CFDP1-206ENST00000566254 STK26Q9P289 416 aa13.02□□□□□ -0.33
CFDP1-206ENST00000566254 CCDC144AA2RUR9 1427 aa13.02□□□□□ -0.33
CFDP1-206ENST00000566254 FAM182BQ5T319 152 aa13.01□□□□□ -0.33
CFDP1-206ENST00000566254 NDUFB9Q9Y6M9 179 aa13.01□□□□□ -0.33
CFDP1-206ENST00000566254 PLEKHH1Q9ULM0 1364 aa13.01□□□□□ -0.33
CFDP1-206ENST00000566254 PLCH1Q4KWH8 1693 aa13.01□□□□□ -0.33
CFDP1-206ENST00000566254 TNS3Q68CZ2 1445 aa13□□□□□ -0.33
CFDP1-206ENST00000566254 RPGRIP1LQ68CZ1 1315 aa13□□□□□ -0.33
CFDP1-206ENST00000566254 WWC1Q8IX03 1113 aa13□□□□□ -0.33
CFDP1-206ENST00000566254 YY1P25490 414 aa12.99□□□□□ -0.33
CFDP1-206ENST00000566254 BLOC1S3Q6QNY0 202 aa12.99□□□□□ -0.33
CFDP1-206ENST00000566254 RNF19BQ6ZMZ0 732 aa12.99□□□□□ -0.33
CFDP1-206ENST00000566254 PLSCR2Q9NRY7 297 aa12.99□□□□□ -0.33
CFDP1-206ENST00000566254 SALL2Q9Y467 1007 aaPredicted RBP12.99□□□□□ -0.33
CFDP1-206ENST00000566254 FAM83GA6ND36 823 aa12.98□□□□□ -0.33
CFDP1-206ENST00000566254 DESI1Q6ICB0 168 aa12.98□□□□□ -0.33
CFDP1-206ENST00000566254 BRICD5Q6PL45 260 aa12.98□□□□□ -0.33
CFDP1-206ENST00000566254 PCDHB3Q9Y5E6 796 aa12.98□□□□□ -0.33
CFDP1-206ENST00000566254 NWD2Q9ULI1 1742 aa12.98□□□□□ -0.33
CFDP1-206ENST00000566254 KIF1AQ12756 1690 aa12.98□□□□□ -0.33
CFDP1-206ENST00000566254 TECPR2O15040 1411 aa12.97□□□□□ -0.33
CFDP1-206ENST00000566254 PPLO60437 1756 aa12.97□□□□□ -0.33
CFDP1-206ENST00000566254 FMN2Q9NZ56 1722 aa12.97□□□□□ -0.33
CFDP1-206ENST00000566254 ADGRF5Q8IZF2 1346 aa12.97□□□□□ -0.33
CFDP1-206ENST00000566254 PER1O15534 1290 aaPredicted RBP12.97□□□□□ -0.33
CFDP1-206ENST00000566254 GPR37L1O60883 481 aa12.97□□□□□ -0.33
CFDP1-206ENST00000566254 SCUBE3Q8IX30 993 aa12.97□□□□□ -0.33
CFDP1-206ENST00000566254 WBP1LQ9NX94 342 aa12.97□□□□□ -0.33
CFDP1-206ENST00000566254 IRF5Q13568 498 aa12.96□□□□□ -0.33
CFDP1-206ENST00000566254 EZH2Q15910 746 aaKnown RBP12.96□□□□□ -0.33
CFDP1-206ENST00000566254 TMEM132EQ6IEE7 984 aa12.96□□□□□ -0.33
CFDP1-206ENST00000566254 ABCA3Q99758 1704 aa12.96□□□□□ -0.34
CFDP1-206ENST00000566254 NR1I2O75469 434 aa12.95□□□□□ -0.34
CFDP1-206ENST00000566254 PSME1Q06323 249 aa12.95□□□□□ -0.34
CFDP1-206ENST00000566254 EPS8L1Q8TE68 723 aa12.95□□□□□ -0.34
CFDP1-206ENST00000566254 THAP11Q96EK4 314 aa12.95□□□□□ -0.34
CFDP1-206ENST00000566254 USB1Q9BQ65 265 aaKnown RBP12.95□□□□□ -0.34
CFDP1-206ENST00000566254 BTG4Q9NY30 223 aa12.95□□□□□ -0.34
CFDP1-206ENST00000566254 RGPD1P0DJD0 1748 aa12.95□□□□□ -0.34
CFDP1-206ENST00000566254 THSD4Q6ZMP0 1018 aa12.94□□□□□ -0.34
CFDP1-206ENST00000566254 DISP2A7MBM2 1401 aa12.94□□□□□ -0.34
CFDP1-206ENST00000566254 SBNO1A3KN83 1393 aa12.94□□□□□ -0.34
CFDP1-206ENST00000566254 ARHGEF10O15013 1369 aa12.94□□□□□ -0.34
CFDP1-206ENST00000566254 ABCC11Q96J66 1382 aa12.94□□□□□ -0.34
CFDP1-206ENST00000566254 NRAPQ86VF7 1730 aa12.93□□□□□ -0.34
CFDP1-206ENST00000566254 LYPD8Q6UX82 237 aa12.93□□□□□ -0.34
CFDP1-206ENST00000566254 SERPINA10Q9UK55 444 aa12.93□□□□□ -0.34
CFDP1-206ENST00000566254 RRBP1Q9P2E9 1410 aaKnown RBP12.93□□□□□ -0.34
CFDP1-206ENST00000566254 POM121CA8CG34 1229 aa12.92□□□□□ -0.34
CFDP1-206ENST00000566254 FMNL1O95466 1100 aaPredicted RBP12.92□□□□□ -0.34
CFDP1-206ENST00000566254 CCDC97Q96F63 343 aaPredicted RBP12.92□□□□□ -0.34
CFDP1-206ENST00000566254 TNS1Q9HBL0 1735 aaKnown RBP12.92□□□□□ -0.34
CFDP1-206ENST00000566254 NRXN1Q9ULB1 1477 aa12.91□□□□□ -0.34
CFDP1-206ENST00000566254 TRIM37O94972 964 aa12.91□□□□□ -0.34
CFDP1-206ENST00000566254 NR6A1Q15406 480 aa12.91□□□□□ -0.34
CFDP1-206ENST00000566254 RGL3Q3MIN7 710 aa12.91□□□□□ -0.34
CFDP1-206ENST00000566254 CAMKK2Q96RR4 588 aa12.91□□□□□ -0.34
CFDP1-206ENST00000566254 KNDC1Q76NI1 1749 aa12.91□□□□□ -0.34
CFDP1-206ENST00000566254 SPATA31A5Q5VU36 1347 aa12.9□□□□□ -0.34
CFDP1-206ENST00000566254 SPATA31A7Q8IWB4 1347 aa12.9□□□□□ -0.34
CFDP1-206ENST00000566254 YTHDC2Q9H6S0 1430 aaKnown RBP12.9□□□□□ -0.34
CFDP1-206ENST00000566254 RGPD8O14715 1765 aaPredicted RBP12.9□□□□□ -0.34
CFDP1-206ENST00000566254 PMFBP1Q8TBY8 1022 aa12.9□□□□□ -0.34
CFDP1-206ENST00000566254 IFT172Q9UG01 1749 aa12.89□□□□□ -0.35
CFDP1-206ENST00000566254 WASHC4Q2M389 1173 aa12.89□□□□□ -0.35
CFDP1-206ENST00000566254 KCTD12Q96CX2 325 aaKnown RBP12.89□□□□□ -0.35
CFDP1-206ENST00000566254 THSD7AQ9UPZ6 1657 aa12.89□□□□□ -0.35
CFDP1-206ENST00000566254 APBA3O96018 575 aa12.88□□□□□ -0.35
CFDP1-206ENST00000566254 SAFB2Q14151 953 aaKnown RBP eCLIP12.88□□□□□ -0.35
CFDP1-206ENST00000566254 ADGRB2O60241 1585 aa12.88□□□□□ -0.35
CFDP1-206ENST00000566254 PIK3C2GO75747 1445 aa12.88□□□□□ -0.35
CFDP1-206ENST00000566254 COL14A1Q05707 1796 aaKnown RBP12.87□□□□□ -0.35
CFDP1-206ENST00000566254 GLMNQ92990 594 aa12.87□□□□□ -0.35
CFDP1-206ENST00000566254 CALR3Q96L12 384 aaKnown RBP12.87□□□□□ -0.35
CFDP1-206ENST00000566254 ANKRD30BQ9BXX2 1392 aa12.86□□□□□ -0.35
CFDP1-206ENST00000566254 JUNDP17535 347 aa12.85□□□□□ -0.35
CFDP1-206ENST00000566254 FAM196AQ6ZSG2 479 aa12.85□□□□□ -0.35
CFDP1-206ENST00000566254 PPP1R1BQ9UD71 204 aaPredicted RBP12.85□□□□□ -0.35
CFDP1-206ENST00000566254 SPATA31E1Q6ZUB1 1445 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms