RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 THEMISQ8N1K5 641 aaPredicted RBP13.63□□□□□ -0.23
UBFD1-205ENST00000566136 NLRP1Q9C000 1473 aa13.63□□□□□ -0.23
UBFD1-205ENST00000566136 UGGT1Q9NYU2 1555 aa13.62□□□□□ -0.23
UBFD1-205ENST00000566136 ERVK-7P63135 1459 aa13.62□□□□□ -0.23
UBFD1-205ENST00000566136 GYS2P54840 703 aa13.62□□□□□ -0.23
UBFD1-205ENST00000566136 ERBINQ96RT1 1412 aa13.62□□□□□ -0.23
UBFD1-205ENST00000566136 POLR1AO95602 1720 aaPredicted RBP13.62□□□□□ -0.23
UBFD1-205ENST00000566136 SPATA31D1Q6ZQQ2 1576 aa13.62□□□□□ -0.23
UBFD1-205ENST00000566136 NEURL4Q96JN8 1562 aa13.62□□□□□ -0.23
UBFD1-205ENST00000566136 ANKLE2Q86XL3 938 aa13.62□□□□□ -0.23
UBFD1-205ENST00000566136 DCAF11Q8TEB1 546 aa13.62□□□□□ -0.23
UBFD1-205ENST00000566136 MKRN1Q9UHC7 482 aaKnown RBP13.62□□□□□ -0.23
UBFD1-205ENST00000566136 MOXD2PA6NHM9 499 aa13.61□□□□□ -0.23
UBFD1-205ENST00000566136 FANCCQ00597 558 aa13.61□□□□□ -0.23
UBFD1-205ENST00000566136 AMPD3Q01432 767 aa13.61□□□□□ -0.23
UBFD1-205ENST00000566136 CLEC11AQ9Y240 323 aa13.61□□□□□ -0.23
UBFD1-205ENST00000566136 SPIRE2Q8WWL2 714 aa13.61□□□□□ -0.23
UBFD1-205ENST00000566136 TSC1Q92574 1164 aa13.61□□□□□ -0.23
UBFD1-205ENST00000566136 MPHOSPH6Q99547 160 aaKnown RBP13.61□□□□□ -0.23
UBFD1-205ENST00000566136 THRAP3Q9Y2W1 955 aaKnown RBP13.61□□□□□ -0.23
UBFD1-205ENST00000566136 METTL3Q86U44 580 aaKnown RBP13.6□□□□□ -0.23
UBFD1-205ENST00000566136 CHST12Q9NRB3 414 aa13.6□□□□□ -0.23
UBFD1-205ENST00000566136 PRDM15P57071 1507 aaPredicted RBP13.6□□□□□ -0.23
UBFD1-205ENST00000566136 P4HBP07237 508 aaKnown RBP13.59□□□□□ -0.23
UBFD1-205ENST00000566136 CTDSPL2Q05D32 466 aa13.59□□□□□ -0.23
UBFD1-205ENST00000566136 LRRN4Q8WUT4 740 aa13.59□□□□□ -0.23
UBFD1-205ENST00000566136 CARD11Q9BXL7 1154 aa13.59□□□□□ -0.23
UBFD1-205ENST00000566136 MRS2Q9HD23 443 aa13.59□□□□□ -0.23
UBFD1-205ENST00000566136 PRM3Q9NNZ6 103 aa13.59□□□□□ -0.23
UBFD1-205ENST00000566136 ATP2B4P23634 1241 aa13.59□□□□□ -0.23
UBFD1-205ENST00000566136 IQSEC2Q5JU85 1478 aa13.59□□□□□ -0.23
UBFD1-205ENST00000566136 RALGAPBQ86X10 1494 aa13.59□□□□□ -0.23
UBFD1-205ENST00000566136 OSBPL2Q9H1P3 480 aa13.58□□□□□ -0.23
UBFD1-205ENST00000566136 KANSL2Q9H9L4 492 aa13.58□□□□□ -0.23
UBFD1-205ENST00000566136 ATP9BO43861 1147 aa13.58□□□□□ -0.24
UBFD1-205ENST00000566136 IER2Q9BTL4 223 aa13.58□□□□□ -0.24
UBFD1-205ENST00000566136 RGL3Q3MIN7 710 aa13.57□□□□□ -0.24
UBFD1-205ENST00000566136 CAPN12Q6ZSI9 719 aa13.57□□□□□ -0.24
UBFD1-205ENST00000566136 USP5P45974 858 aa13.57□□□□□ -0.24
UBFD1-205ENST00000566136 WASHC4Q2M389 1173 aa13.57□□□□□ -0.24
UBFD1-205ENST00000566136 ZNF394Q53GI3 561 aa13.57□□□□□ -0.24
UBFD1-205ENST00000566136 CCSER2Q9H7U1 834 aa13.57□□□□□ -0.24
UBFD1-205ENST00000566136 DEPDC5O75140 1603 aa13.57□□□□□ -0.24
UBFD1-205ENST00000566136 KANK1Q14678 1352 aa13.57□□□□□ -0.24
UBFD1-205ENST00000566136 NPHP4O75161 1426 aaPredicted RBP13.57□□□□□ -0.24
UBFD1-205ENST00000566136 ARHGAP31Q2M1Z3 1444 aa13.57□□□□□ -0.24
UBFD1-205ENST00000566136 UBAP1LF5GYI3 381 aa13.56□□□□□ -0.24
UBFD1-205ENST00000566136 ECM1Q16610 540 aa13.56□□□□□ -0.24
UBFD1-205ENST00000566136 ODR4Q5SWX8 454 aa13.56□□□□□ -0.24
UBFD1-205ENST00000566136 SETDB2Q96T68 719 aa13.56□□□□□ -0.24
UBFD1-205ENST00000566136 UNC13BO14795 1591 aa13.56□□□□□ -0.24
UBFD1-205ENST00000566136 WDR75Q8IWA0 830 aaKnown RBP13.55□□□□□ -0.24
UBFD1-205ENST00000566136 CCDC144AA2RUR9 1427 aa13.55□□□□□ -0.24
UBFD1-205ENST00000566136 RNF187Q5TA31 235 aaPredicted RBP13.55□□□□□ -0.24
UBFD1-205ENST00000566136 L3MBTL3Q96JM7 780 aaPredicted RBP13.55□□□□□ -0.24
UBFD1-205ENST00000566136 WWC3Q9ULE0 1092 aa13.55□□□□□ -0.24
UBFD1-205ENST00000566136 ST20-MTHFSA0A0A6YYL1 179 aa13.54□□□□□ -0.24
UBFD1-205ENST00000566136 ZNF500O60304 480 aaPredicted RBP13.54□□□□□ -0.24
UBFD1-205ENST00000566136 EAPPQ56P03 285 aaPredicted RBP13.54□□□□□ -0.24
UBFD1-205ENST00000566136 MAP3K20Q9NYL2 800 aaKnown RBP13.54□□□□□ -0.24
UBFD1-205ENST00000566136 MED14O60244 1454 aa13.54□□□□□ -0.24
UBFD1-205ENST00000566136 EIF3JO75822 258 aaKnown RBP13.54□□□□□ -0.24
UBFD1-205ENST00000566136 UBR1Q8IWV7 1749 aa13.54□□□□□ -0.24
UBFD1-205ENST00000566136 MAP3K9P80192 1104 aa13.53□□□□□ -0.24
UBFD1-205ENST00000566136 SPC25Q9HBM1 224 aa13.53□□□□□ -0.24
UBFD1-205ENST00000566136 KLF15Q9UIH9 416 aa13.53□□□□□ -0.24
UBFD1-205ENST00000566136 ROCK2O75116 1388 aaKnown RBP13.53□□□□□ -0.24
UBFD1-205ENST00000566136 TNFRSF10BO14763 440 aa13.53□□□□□ -0.24
UBFD1-205ENST00000566136 PRMT3O60678 531 aa13.53□□□□□ -0.24
UBFD1-205ENST00000566136 RSBN1LQ6PCB5 846 aaPredicted RBP13.53□□□□□ -0.24
UBFD1-205ENST00000566136 GAS2L2Q8NHY3 880 aa13.53□□□□□ -0.24
UBFD1-205ENST00000566136 NAP1L2Q9ULW6 460 aaPredicted RBP13.53□□□□□ -0.24
UBFD1-205ENST00000566136 VWDEQ8N2E2 1590 aa13.52□□□□□ -0.24
UBFD1-205ENST00000566136 LTKP29376 864 aa13.52□□□□□ -0.24
UBFD1-205ENST00000566136 IL17RAQ96F46 866 aa13.52□□□□□ -0.24
UBFD1-205ENST00000566136 ASB16Q96NS5 453 aa13.52□□□□□ -0.24
UBFD1-205ENST00000566136 NRBP1Q9UHY1 535 aa13.52□□□□□ -0.24
UBFD1-205ENST00000566136 IQGAP1P46940 1657 aa13.52□□□□□ -0.25
UBFD1-205ENST00000566136 LMTK2Q8IWU2 1503 aa13.52□□□□□ -0.25
UBFD1-205ENST00000566136 NUTM2BA6NNL0 878 aaPredicted RBP13.51□□□□□ -0.25
UBFD1-205ENST00000566136 NUTM2EB1AL46 878 aaPredicted RBP13.51□□□□□ -0.25
UBFD1-205ENST00000566136 NUTM2DQ5VT03 806 aaPredicted RBP13.51□□□□□ -0.25
UBFD1-205ENST00000566136 WDR78Q5VTH9 848 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 NUTM2AQ8IVF1 878 aaPredicted RBP13.51□□□□□ -0.25
UBFD1-205ENST00000566136 IQGAP3Q86VI3 1631 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 USP17L3A6NCW0 530 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 USP17L4A6NCW7 530 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 USP17L15C9J2P7 530 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 USP17L10C9JJH3 530 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 USP17L13C9JLJ4 530 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 USP17L12C9JPN9 530 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 USP17L11C9JVI0 530 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 USP17L21D6R901 530 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 USP17L18D6R9N7 530 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 USP17L22D6RA61 530 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 USP17L17D6RBQ6 530 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 USP17L19D6RCP7 530 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 USP17L20D6RJB6 530 aa13.51□□□□□ -0.25
UBFD1-205ENST00000566136 EPB41L2O43491 1005 aaKnown RBP13.51□□□□□ -0.25
UBFD1-205ENST00000566136 LILRB3O75022 631 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms