RNA–Protein interactions for RNA: ENST00000566093.1

CNEP1R1-207, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-207ENST00000566093 FHDC1Q9C0D6 1143 aaPredicted RBP6.49□□□□□ -1.37
CNEP1R1-207ENST00000566093 KLF15Q9UIH9 416 aa6.49□□□□□ -1.37
CNEP1R1-207ENST00000566093 PIK3CDO00329 1044 aa6.48□□□□□ -1.37
CNEP1R1-207ENST00000566093 PIK3R2O00459 728 aa6.48□□□□□ -1.37
CNEP1R1-207ENST00000566093 BMP4P12644 408 aa6.48□□□□□ -1.37
CNEP1R1-207ENST00000566093 FGFR3P22607 806 aa6.48□□□□□ -1.37
CNEP1R1-207ENST00000566093 ERICH6Q7L0X2 663 aa6.48□□□□□ -1.37
CNEP1R1-207ENST00000566093 RNF135Q8IUD6 432 aa6.48□□□□□ -1.37
CNEP1R1-207ENST00000566093 CNKSR1Q969H4 720 aa6.48□□□□□ -1.37
CNEP1R1-207ENST00000566093 XAGE2Q96GT9 111 aa6.48□□□□□ -1.37
CNEP1R1-207ENST00000566093 CALR3Q96L12 384 aaKnown RBP6.48□□□□□ -1.37
CNEP1R1-207ENST00000566093 CCDC85AQ96PX6 553 aaPredicted RBP6.48□□□□□ -1.37
CNEP1R1-207ENST00000566093 RUBCNLQ9H714 662 aa6.48□□□□□ -1.37
CNEP1R1-207ENST00000566093 RAB6BQ9NRW1 208 aa6.48□□□□□ -1.37
CNEP1R1-207ENST00000566093 SUPT5HO00267 1087 aaKnown RBP6.47□□□□□ -1.37
CNEP1R1-207ENST00000566093 GNRH1P01148 92 aa6.47□□□□□ -1.37
CNEP1R1-207ENST00000566093 ARAFP10398 606 aa6.47□□□□□ -1.37
CNEP1R1-207ENST00000566093 AMPD1P23109 780 aa6.47□□□□□ -1.37
CNEP1R1-207ENST00000566093 MSX1P28360 303 aa6.47□□□□□ -1.37
CNEP1R1-207ENST00000566093 SLFNL1Q499Z3 407 aa6.47□□□□□ -1.37
CNEP1R1-207ENST00000566093 NKAPLQ5M9Q1 402 aa6.47□□□□□ -1.37
CNEP1R1-207ENST00000566093 RNF20Q5VTR2 975 aa6.47□□□□□ -1.37
CNEP1R1-207ENST00000566093 ZNF592Q92610 1267 aa6.47□□□□□ -1.37
CNEP1R1-207ENST00000566093 CDCA7Q9BWT1 371 aaPredicted RBP6.47□□□□□ -1.37
CNEP1R1-207ENST00000566093 NOP53Q9NZM5 478 aaKnown RBP6.47□□□□□ -1.37
CNEP1R1-207ENST00000566093 C4orf17Q53FE4 359 aa6.46□□□□□ -1.38
CNEP1R1-207ENST00000566093 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.38
CNEP1R1-207ENST00000566093 TRIM11Q96F44 468 aa6.46□□□□□ -1.38
CNEP1R1-207ENST00000566093 CRISPLD1Q9H336 500 aa6.46□□□□□ -1.38
CNEP1R1-207ENST00000566093 DNAAF2Q9NVR5 837 aaKnown RBP6.46□□□□□ -1.38
CNEP1R1-207ENST00000566093 NEURL1BA8MQ27 555 aa6.45□□□□□ -1.38
CNEP1R1-207ENST00000566093 GATA4P43694 442 aa6.45□□□□□ -1.38
CNEP1R1-207ENST00000566093 TBC1D9Q6ZT07 1266 aa6.45□□□□□ -1.38
CNEP1R1-207ENST00000566093 CHSY3Q70JA7 882 aa6.45□□□□□ -1.38
CNEP1R1-207ENST00000566093 UCN2Q96RP3 112 aa6.45□□□□□ -1.38
CNEP1R1-207ENST00000566093 ZSCAN10Q96SZ4 725 aaPredicted RBP6.45□□□□□ -1.38
CNEP1R1-207ENST00000566093 PCDHB11Q9Y5F2 797 aa6.45□□□□□ -1.38
CNEP1R1-207ENST00000566093 SKIP12755 728 aa6.44□□□□□ -1.38
CNEP1R1-207ENST00000566093 C1orf115Q9H7X2 142 aa6.44□□□□□ -1.38
CNEP1R1-207ENST00000566093 CHIC2Q9UKJ5 165 aa6.44□□□□□ -1.38
CNEP1R1-207ENST00000566093 EFHC2Q5JST6 749 aa6.43□□□□□ -1.38
CNEP1R1-207ENST00000566093 ARTNQ5T4W7 220 aa6.43□□□□□ -1.38
CNEP1R1-207ENST00000566093 FCHSD1Q86WN1 690 aa6.43□□□□□ -1.38
CNEP1R1-207ENST00000566093 DEPDC4Q8N2C3 294 aa6.43□□□□□ -1.38
CNEP1R1-207ENST00000566093 PLPP7Q8NBV4 271 aa6.43□□□□□ -1.38
CNEP1R1-207ENST00000566093 TFIP11Q9UBB9 837 aaKnown RBP6.43□□□□□ -1.38
CNEP1R1-207ENST00000566093 CSB-PGBD3P0DP91 1061 aa6.42□□□□□ -1.38
CNEP1R1-207ENST00000566093 PGBD3Q8N328 593 aa6.42□□□□□ -1.38
CNEP1R1-207ENST00000566093 ZCCHC2Q9C0B9 1178 aaKnown RBP6.42□□□□□ -1.38
CNEP1R1-207ENST00000566093 DOLKQ9UPQ8 538 aa6.42□□□□□ -1.38
CNEP1R1-207ENST00000566093 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
CNEP1R1-207ENST00000566093 PALM3A6NDB9 673 aaPredicted RBP6.41□□□□□ -1.38
CNEP1R1-207ENST00000566093 OXLD1Q5BKU9 147 aa6.41□□□□□ -1.38
CNEP1R1-207ENST00000566093 PPARGC1BQ86YN6 1023 aaKnown RBP6.41□□□□□ -1.38
CNEP1R1-207ENST00000566093 PLVAPQ9BX97 442 aa6.41□□□□□ -1.38
CNEP1R1-207ENST00000566093 PPP1R12CQ9BZL4 782 aa6.41□□□□□ -1.38
CNEP1R1-207ENST00000566093 TPSG1Q9NRR2 321 aa6.41□□□□□ -1.38
CNEP1R1-207ENST00000566093 PCDHGC4Q9Y5F7 938 aa6.41□□□□□ -1.38
CNEP1R1-207ENST00000566093 DYRK3O43781 588 aa6.4□□□□□ -1.38
CNEP1R1-207ENST00000566093 ATP9BO43861 1147 aa6.4□□□□□ -1.38
CNEP1R1-207ENST00000566093 MAP7D1Q3KQU3 841 aa6.4□□□□□ -1.38
CNEP1R1-207ENST00000566093 GNASQ5JWF2 1037 aa6.4□□□□□ -1.38
CNEP1R1-207ENST00000566093 FAM182BQ5T319 152 aa6.4□□□□□ -1.38
CNEP1R1-207ENST00000566093 NFATC2IPQ8NCF5 419 aa6.4□□□□□ -1.38
CNEP1R1-207ENST00000566093 ZFP64Q9NPA5 681 aa6.4□□□□□ -1.38
CNEP1R1-207ENST00000566093 AVENQ9NQS1 362 aaPredicted RBP6.4□□□□□ -1.38
CNEP1R1-207ENST00000566093 USP17L5A8MUK1 530 aa6.39□□□□□ -1.39
CNEP1R1-207ENST00000566093 SPATA31C1P0DKV0 1188 aa6.39□□□□□ -1.39
CNEP1R1-207ENST00000566093 RFX1P22670 979 aa6.39□□□□□ -1.39
CNEP1R1-207ENST00000566093 LMOD1P29536 600 aaPredicted RBP6.39□□□□□ -1.39
CNEP1R1-207ENST00000566093 TNP2Q05952 138 aa6.39□□□□□ -1.39
CNEP1R1-207ENST00000566093 USP4Q13107 963 aa6.39□□□□□ -1.39
CNEP1R1-207ENST00000566093 TMEM214Q6NUQ4 689 aaKnown RBP6.39□□□□□ -1.39
CNEP1R1-207ENST00000566093 RHBDD1Q8TEB9 315 aa6.39□□□□□ -1.39
CNEP1R1-207ENST00000566093 MDFIQ99750 246 aa6.39□□□□□ -1.39
CNEP1R1-207ENST00000566093 ATP4AP20648 1035 aa6.38□□□□□ -1.39
CNEP1R1-207ENST00000566093 ADH6P28332 368 aa6.38□□□□□ -1.39
CNEP1R1-207ENST00000566093 NCOA4Q13772 614 aa6.38□□□□□ -1.39
CNEP1R1-207ENST00000566093 COL9A3Q14050 684 aaPredicted RBP6.38□□□□□ -1.39
CNEP1R1-207ENST00000566093 NLRP8Q86W28 1048 aa6.38□□□□□ -1.39
CNEP1R1-207ENST00000566093 ESF1Q9H501 851 aaKnown RBP6.38□□□□□ -1.39
CNEP1R1-207ENST00000566093 MAFBQ9Y5Q3 323 aaPredicted RBP6.38□□□□□ -1.39
CNEP1R1-207ENST00000566093 SCO2A0A1W2PP80 73 aa6.37□□□□□ -1.39
CNEP1R1-207ENST00000566093 USP17L3A6NCW0 530 aa6.37□□□□□ -1.39
CNEP1R1-207ENST00000566093 USP17L4A6NCW7 530 aa6.37□□□□□ -1.39
CNEP1R1-207ENST00000566093 STAU1O95793 577 aaKnown RBP6.37□□□□□ -1.39
CNEP1R1-207ENST00000566093 MYCP01106 439 aaPredicted RBP6.37□□□□□ -1.39
CNEP1R1-207ENST00000566093 MAPTP10636 758 aaKnown RBP6.37□□□□□ -1.39
CNEP1R1-207ENST00000566093 EML3Q32P44 896 aa6.37□□□□□ -1.39
CNEP1R1-207ENST00000566093 CDCA8Q53HL2 280 aa6.37□□□□□ -1.39
CNEP1R1-207ENST00000566093 CFAP70Q5T0N1 1121 aa6.37□□□□□ -1.39
CNEP1R1-207ENST00000566093 FIGNL1Q6PIW4 674 aa6.37□□□□□ -1.39
CNEP1R1-207ENST00000566093 USP17L2Q6R6M4 530 aa6.37□□□□□ -1.39
CNEP1R1-207ENST00000566093 USP17L1Q7RTZ2 530 aa6.37□□□□□ -1.39
CNEP1R1-207ENST00000566093 CCDC82Q8N4S0 544 aa6.37□□□□□ -1.39
CNEP1R1-207ENST00000566093 PLEKHM2Q8IWE5 1019 aa6.36□□□□□ -1.39
CNEP1R1-207ENST00000566093 ZNF295-AS1Q8N0V1 137 aa6.36□□□□□ -1.39
CNEP1R1-207ENST00000566093 CCDC97Q96F63 343 aaPredicted RBP6.36□□□□□ -1.39
CNEP1R1-207ENST00000566093 ETNK1Q9HBU6 452 aa6.36□□□□□ -1.39
CNEP1R1-207ENST00000566093 MKRN1Q9UHC7 482 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms