RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 GUCY1B3Q02153 619 aa15.84■□□□□ 0.13
CX3CL1-204ENST00000565912 RAB11FIP3O75154 756 aa15.84■□□□□ 0.13
CX3CL1-204ENST00000565912 UBXN4Q92575 508 aa15.84■□□□□ 0.13
CX3CL1-204ENST00000565912 MCM4P33991 863 aa15.83■□□□□ 0.13
CX3CL1-204ENST00000565912 MAP3K12Q12852 859 aa15.83■□□□□ 0.13
CX3CL1-204ENST00000565912 IFIT5Q13325 482 aaKnown RBP15.83■□□□□ 0.13
CX3CL1-204ENST00000565912 MPRIPQ6WCQ1 1025 aa15.83■□□□□ 0.13
CX3CL1-204ENST00000565912 CCDC196A0A1B0GTZ2 297 aa15.83■□□□□ 0.13
CX3CL1-204ENST00000565912 PDIA4P13667 645 aaKnown RBP15.83■□□□□ 0.13
CX3CL1-204ENST00000565912 CUL5Q93034 780 aa15.83■□□□□ 0.12
CX3CL1-204ENST00000565912 TRMT112Q9UI30 125 aaKnown RBP15.83■□□□□ 0.12
CX3CL1-204ENST00000565912 PAXIP1Q6ZW49 1069 aaPredicted RBP15.83■□□□□ 0.12
CX3CL1-204ENST00000565912 CCDC61Q9Y6R9 512 aa15.83■□□□□ 0.12
CX3CL1-204ENST00000565912 PEG3Q9GZU2 1588 aa15.83■□□□□ 0.12
CX3CL1-204ENST00000565912 HMGB2P26583 209 aaKnown RBP15.83■□□□□ 0.12
CX3CL1-204ENST00000565912 PTPN23Q9H3S7 1636 aa15.82■□□□□ 0.12
CX3CL1-204ENST00000565912 LIG1P18858 919 aa15.82■□□□□ 0.12
CX3CL1-204ENST00000565912 DYDC1Q8WWB3 177 aa15.82■□□□□ 0.12
CX3CL1-204ENST00000565912 C8orf76Q96K31 380 aa15.82■□□□□ 0.12
CX3CL1-204ENST00000565912 CCDC8Q9H0W5 538 aaPredicted RBP15.82■□□□□ 0.12
CX3CL1-204ENST00000565912 ADGRL1O94910 1474 aa15.82■□□□□ 0.12
CX3CL1-204ENST00000565912 CCDC91Q7Z6B0 441 aa15.82■□□□□ 0.12
CX3CL1-204ENST00000565912 UNC13AQ9UPW8 1703 aa15.82■□□□□ 0.12
CX3CL1-204ENST00000565912 ADAMTS2O95450 1211 aa15.82■□□□□ 0.12
CX3CL1-204ENST00000565912 SFPQP23246 707 aaKnown RBP eCLIP15.82■□□□□ 0.12
CX3CL1-204ENST00000565912 DNA2P51530 1060 aa15.82■□□□□ 0.12
CX3CL1-204ENST00000565912 CRACR2AQ9BSW2 395 aa15.82■□□□□ 0.12
CX3CL1-204ENST00000565912 SLC12A7Q9Y666 1083 aa15.82■□□□□ 0.12
CX3CL1-204ENST00000565912 NSD3Q9BZ95 1437 aa15.82■□□□□ 0.12
CX3CL1-204ENST00000565912 SLC5A1P13866 664 aa15.81■□□□□ 0.12
CX3CL1-204ENST00000565912 IQCA1Q86XH1 822 aa15.81■□□□□ 0.12
CX3CL1-204ENST00000565912 VPS36Q86VN1 386 aa15.81■□□□□ 0.12
CX3CL1-204ENST00000565912 RPGRQ92834 1020 aaKnown RBP15.81■□□□□ 0.12
CX3CL1-204ENST00000565912 ABCC5O15440 1437 aa15.81■□□□□ 0.12
CX3CL1-204ENST00000565912 TAF7Q15545 349 aaPredicted RBP15.81■□□□□ 0.12
CX3CL1-204ENST00000565912 TMEM266Q2M3C6 531 aa15.81■□□□□ 0.12
CX3CL1-204ENST00000565912 CCDC178Q5BJE1 867 aa15.81■□□□□ 0.12
CX3CL1-204ENST00000565912 CTNNBL1Q8WYA6 563 aaPredicted RBP15.81■□□□□ 0.12
CX3CL1-204ENST00000565912 ZNF213O14771 459 aa15.81■□□□□ 0.12
CX3CL1-204ENST00000565912 RAB34Q9BZG1 259 aa15.81■□□□□ 0.12
CX3CL1-204ENST00000565912 GSTTP1A0A1W2PQM5 241 aa15.8■□□□□ 0.12
CX3CL1-204ENST00000565912 MACROD2A1Z1Q3 448 aa15.8■□□□□ 0.12
CX3CL1-204ENST00000565912 WAPLQ7Z5K2 1190 aa15.8■□□□□ 0.12
CX3CL1-204ENST00000565912 ANO10Q9NW15 660 aa15.8■□□□□ 0.12
CX3CL1-204ENST00000565912 MAP2K1Q02750 393 aaPredicted RBP15.8■□□□□ 0.12
CX3CL1-204ENST00000565912 NLRP5P59047 1200 aa15.8■□□□□ 0.12
CX3CL1-204ENST00000565912 TRMT1LQ7Z2T5 733 aaKnown RBP15.8■□□□□ 0.12
CX3CL1-204ENST00000565912 PHAXQ9H814 394 aaKnown RBP15.8■□□□□ 0.12
CX3CL1-204ENST00000565912 CCDC194A0A1B0GVG4 234 aa15.79■□□□□ 0.12
CX3CL1-204ENST00000565912 IL27Q8NEV9 243 aa15.79■□□□□ 0.12
CX3CL1-204ENST00000565912 SLFN5Q08AF3 891 aa15.79■□□□□ 0.12
CX3CL1-204ENST00000565912 ERICH4A6NGS2 130 aa15.79■□□□□ 0.12
CX3CL1-204ENST00000565912 ZSCAN12O43309 604 aa15.79■□□□□ 0.12
CX3CL1-204ENST00000565912 SSRP1Q08945 709 aaKnown RBP15.79■□□□□ 0.12
CX3CL1-204ENST00000565912 LUZP1Q86V48 1076 aa15.79■□□□□ 0.12
CX3CL1-204ENST00000565912 CCDC150Q8NCX0 1101 aa15.79■□□□□ 0.12
CX3CL1-204ENST00000565912 IFIT3O14879 490 aaKnown RBP15.79■□□□□ 0.12
CX3CL1-204ENST00000565912 KIF5CO60282 957 aa15.79■□□□□ 0.12
CX3CL1-204ENST00000565912 GOPCQ9HD26 462 aa15.79■□□□□ 0.12
CX3CL1-204ENST00000565912 ANKRD18BA2A2Z9 1011 aa15.78■□□□□ 0.12
CX3CL1-204ENST00000565912 GOLGA8AA7E2F4 631 aa15.78■□□□□ 0.12
CX3CL1-204ENST00000565912 GOLGA8BA8MQT2 603 aa15.78■□□□□ 0.12
CX3CL1-204ENST00000565912 F6X3S4 739 aa15.78■□□□□ 0.12
CX3CL1-204ENST00000565912 TOP1P11387 765 aaKnown RBP15.78■□□□□ 0.12
CX3CL1-204ENST00000565912 KIF4BQ2VIQ3 1234 aa15.78■□□□□ 0.12
CX3CL1-204ENST00000565912 TMEM87AQ8NBN3 555 aa15.78■□□□□ 0.12
CX3CL1-204ENST00000565912 INCENPQ9NQS7 918 aa15.78■□□□□ 0.12
CX3CL1-204ENST00000565912 TNNT1P13805 278 aa15.78■□□□□ 0.12
CX3CL1-204ENST00000565912 PTPN14Q15678 1187 aa15.78■□□□□ 0.12
CX3CL1-204ENST00000565912 CPLX3Q8WVH0 158 aa15.78■□□□□ 0.12
CX3CL1-204ENST00000565912 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.78■□□□□ 0.12
CX3CL1-204ENST00000565912 SCAND2PQ9GZW5 306 aaPredicted RBP15.78■□□□□ 0.12
CX3CL1-204ENST00000565912 GOLGA6L10A0A0M3HER8 536 aa15.77■□□□□ 0.12
CX3CL1-204ENST00000565912 CASQ1P31415 396 aa15.77■□□□□ 0.12
CX3CL1-204ENST00000565912 TDRD12Q587J7 1177 aaKnown RBP15.77■□□□□ 0.12
CX3CL1-204ENST00000565912 TMCO3Q6UWJ1 677 aa15.77■□□□□ 0.12
CX3CL1-204ENST00000565912 GBP3Q9H0R5 595 aa15.77■□□□□ 0.12
CX3CL1-204ENST00000565912 C6orf229H3BNL8 230 aa15.77■□□□□ 0.12
CX3CL1-204ENST00000565912 FGFR1OPO95684 399 aaKnown RBP15.77■□□□□ 0.12
CX3CL1-204ENST00000565912 GPTP24298 496 aa15.77■□□□□ 0.12
CX3CL1-204ENST00000565912 AMOTQ4VCS5 1084 aa15.77■□□□□ 0.12
CX3CL1-204ENST00000565912 RNF41Q9H4P4 317 aaPredicted RBP15.77■□□□□ 0.12
CX3CL1-204ENST00000565912 SPDYE4A6NLX3 237 aa15.77■□□□□ 0.11
CX3CL1-204ENST00000565912 HMGB1P09429 215 aaKnown RBP15.77■□□□□ 0.11
CX3CL1-204ENST00000565912 NUP88Q99567 741 aaPredicted RBP15.77■□□□□ 0.11
CX3CL1-204ENST00000565912 CCT2P78371 535 aaKnown RBP15.77■□□□□ 0.11
CX3CL1-204ENST00000565912 SLF2Q8IX21 1173 aa15.77■□□□□ 0.11
CX3CL1-204ENST00000565912 WDR97A6NE52 1622 aa15.76■□□□□ 0.11
CX3CL1-204ENST00000565912 IFFO1Q0D2I5 559 aa15.76■□□□□ 0.11
CX3CL1-204ENST00000565912 EHMT1Q9H9B1 1298 aa15.76■□□□□ 0.11
CX3CL1-204ENST00000565912 ESPNB1AK53 854 aa15.76■□□□□ 0.11
CX3CL1-204ENST00000565912 URI1O94763 535 aaPredicted RBP15.76■□□□□ 0.11
CX3CL1-204ENST00000565912 CATIPQ7Z7H3 387 aa15.76■□□□□ 0.11
CX3CL1-204ENST00000565912 CNNM3Q8NE01 707 aa15.76■□□□□ 0.11
CX3CL1-204ENST00000565912 SH2B1Q9NRF2 756 aaPredicted RBP15.76■□□□□ 0.11
CX3CL1-204ENST00000565912 BIVM-ERCC5R4GMW8 1640 aa15.76■□□□□ 0.11
CX3CL1-204ENST00000565912 HOOK3Q86VS8 718 aa15.75■□□□□ 0.11
CX3CL1-204ENST00000565912 DNAAF4Q8WXU2 420 aa15.75■□□□□ 0.11
CX3CL1-204ENST00000565912 A0A087WZG4 1122 aa15.75■□□□□ 0.11
CX3CL1-204ENST00000565912 SPTY2D1Q68D10 685 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms