RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 ZNF496Q96IT1 587 aaPredicted RBP31.89■■■□□ 2.7
RAB40C-209ENST00000565511 CFAP53Q96M91 514 aa31.89■■■□□ 2.7
RAB40C-209ENST00000565511 KCNA3P22001 575 aa31.88■■■□□ 2.69
RAB40C-209ENST00000565511 TM4SF1P30408 202 aa31.88■■■□□ 2.69
RAB40C-209ENST00000565511 BCL2L12Q9HB09 334 aa31.88■■■□□ 2.69
RAB40C-209ENST00000565511 NRXN2Q9P2S2 1712 aa31.88■■■□□ 2.69
RAB40C-209ENST00000565511 ARFGEF1Q9Y6D6 1849 aa31.88■■■□□ 2.69
RAB40C-209ENST00000565511 BCS1LQ9Y276 419 aa31.87■■■□□ 2.69
RAB40C-209ENST00000565511 TEFQ10587 303 aa31.86■■■□□ 2.69
RAB40C-209ENST00000565511 HEG1Q9ULI3 1381 aa31.85■■■□□ 2.69
RAB40C-209ENST00000565511 KCNQ3O43525 872 aa31.85■■■□□ 2.69
RAB40C-209ENST00000565511 ZNF790Q6PG37 636 aa31.85■■■□□ 2.69
RAB40C-209ENST00000565511 TTC5Q8N0Z6 440 aa31.85■■■□□ 2.69
RAB40C-209ENST00000565511 ZPR1O75312 459 aa31.84■■■□□ 2.69
RAB40C-209ENST00000565511 CANXP27824 592 aaKnown RBP31.84■■■□□ 2.69
RAB40C-209ENST00000565511 NARFQ9UHQ1 456 aa31.84■■■□□ 2.69
RAB40C-209ENST00000565511 SCN7AQ01118 1682 aa31.83■■■□□ 2.69
RAB40C-209ENST00000565511 U2AF1L5P0DN76 240 aaPredicted RBP31.83■■■□□ 2.69
RAB40C-209ENST00000565511 U2AF1Q01081 240 aaKnown RBP eCLIP31.83■■■□□ 2.69
RAB40C-209ENST00000565511 ZNF526Q8TF50 670 aaPredicted RBP31.83■■■□□ 2.69
RAB40C-209ENST00000565511 NFIXQ14938 502 aa31.82■■■□□ 2.68
RAB40C-209ENST00000565511 CHRNA5P30532 468 aa31.81■■■□□ 2.68
RAB40C-209ENST00000565511 FCHSD2O94868 740 aa31.8■■■□□ 2.68
RAB40C-209ENST00000565511 NUDCQ9Y266 331 aa31.8■■■□□ 2.68
RAB40C-209ENST00000565511 SENP3-EIF4A1A0A087X0R7 540 aa31.79■■■□□ 2.68
RAB40C-209ENST00000565511 EIF5P55010 431 aaKnown RBP31.79■■■□□ 2.68
RAB40C-209ENST00000565511 DLG5Q8TDM6 1919 aa31.77■■■□□ 2.68
RAB40C-209ENST00000565511 DLEC1Q9Y238 1755 aa31.77■■■□□ 2.68
RAB40C-209ENST00000565511 MCM10Q7L590 875 aa31.77■■■□□ 2.68
RAB40C-209ENST00000565511 CARMIL3Q8ND23 1372 aa31.77■■■□□ 2.68
RAB40C-209ENST00000565511 STARD3NLO95772 234 aa31.76■■■□□ 2.67
RAB40C-209ENST00000565511 GPBP1L1Q9HC44 474 aaPredicted RBP31.76■■■□□ 2.67
RAB40C-209ENST00000565511 DCTN1Q14203 1278 aa31.75■■■□□ 2.67
RAB40C-209ENST00000565511 ARHGAP27Q6ZUM4 889 aa31.75■■■□□ 2.67
RAB40C-209ENST00000565511 ANKRD31Q8N7Z5 1873 aa31.74■■■□□ 2.67
RAB40C-209ENST00000565511 PRAMEF22A3QJZ6 481 aa31.74■■■□□ 2.67
RAB40C-209ENST00000565511 BTBD11A6QL63 1104 aa31.74■■■□□ 2.67
RAB40C-209ENST00000565511 A1BGP04217 495 aa31.74■■■□□ 2.67
RAB40C-209ENST00000565511 FMNL2Q96PY5 1086 aa31.74■■■□□ 2.67
RAB40C-209ENST00000565511 BCORQ6W2J9 1755 aa31.73■■■□□ 2.67
RAB40C-209ENST00000565511 PIM2Q9P1W9 311 aa31.73■■■□□ 2.67
RAB40C-209ENST00000565511 SERPINB2P05120 415 aa31.71■■■□□ 2.67
RAB40C-209ENST00000565511 PIP4K2AP48426 406 aaPredicted RBP31.7■■■□□ 2.67
RAB40C-209ENST00000565511 BICDL1Q6ZP65 573 aa31.7■■■□□ 2.67
RAB40C-209ENST00000565511 ZNF330Q9Y3S2 320 aaPredicted RBP31.7■■■□□ 2.67
RAB40C-209ENST00000565511 DALRD3Q5D0E6 543 aaKnown RBP31.69■■■□□ 2.66
RAB40C-209ENST00000565511 TBC1D9BQ66K14 1250 aa31.69■■■□□ 2.66
RAB40C-209ENST00000565511 TBC1D2BQ9UPU7 963 aa31.69■■■□□ 2.66
RAB40C-209ENST00000565511 USP16Q9Y5T5 823 aa31.69■■■□□ 2.66
RAB40C-209ENST00000565511 SBF1O95248 1867 aa31.69■■■□□ 2.66
RAB40C-209ENST00000565511 TEX13AQ9BXU3 409 aaPredicted RBP31.68■■■□□ 2.66
RAB40C-209ENST00000565511 COL11A2P13942 1736 aaPredicted RBP31.68■■■□□ 2.66
RAB40C-209ENST00000565511 A0A087WZG4 1122 aa31.66■■■□□ 2.66
RAB40C-209ENST00000565511 KIF3CO14782 793 aa31.66■■■□□ 2.66
RAB40C-209ENST00000565511 IL6STP40189 918 aaPredicted RBP31.66■■■□□ 2.66
RAB40C-209ENST00000565511 RTF1Q92541 710 aaKnown RBP31.65■■■□□ 2.66
RAB40C-209ENST00000565511 KDM3BQ7LBC6 1761 aa31.65■■■□□ 2.66
RAB40C-209ENST00000565511 CAMTA2O94983 1202 aa31.64■■■□□ 2.66
RAB40C-209ENST00000565511 C9orf131Q5VYM1 1079 aa31.63■■■□□ 2.65
RAB40C-209ENST00000565511 PLEKHF1Q96S99 279 aa31.63■■■□□ 2.65
RAB40C-209ENST00000565511 LAMB4A4D0S4 1761 aa31.62■■■□□ 2.65
RAB40C-209ENST00000565511 CCDC24Q8N4L8 307 aa31.62■■■□□ 2.65
RAB40C-209ENST00000565511 HTATSF1O43719 755 aaKnown RBP31.61■■■□□ 2.65
RAB40C-209ENST00000565511 MIS18AQ9NYP9 233 aa31.61■■■□□ 2.65
RAB40C-209ENST00000565511 RASSF7Q02833 373 aa31.58■■■□□ 2.65
RAB40C-209ENST00000565511 PRR5LQ6MZQ0 368 aa31.58■■■□□ 2.65
RAB40C-209ENST00000565511 C2CD5Q86YS7 1000 aa31.58■■■□□ 2.65
RAB40C-209ENST00000565511 CEP350Q5VT06 3117 aa31.58■■■□□ 2.65
RAB40C-209ENST00000565511 NBPF26B4DH59 902 aa31.57■■■□□ 2.64
RAB40C-209ENST00000565511 SNRPA1P09661 255 aaKnown RBP31.57■■■□□ 2.64
RAB40C-209ENST00000565511 PRELPP51888 382 aa31.57■■■□□ 2.64
RAB40C-209ENST00000565511 NBPF10Q6P3W6 841 aaKnown RBP31.57■■■□□ 2.64
RAB40C-209ENST00000565511 DZIP3Q86Y13 1208 aaKnown RBP31.57■■■□□ 2.64
RAB40C-209ENST00000565511 NBPF15Q8N660 670 aa31.57■■■□□ 2.64
RAB40C-209ENST00000565511 THUMPD2Q9BTF0 503 aaKnown RBP31.57■■■□□ 2.64
RAB40C-209ENST00000565511 NMRK2Q9NPI5 230 aa31.57■■■□□ 2.64
RAB40C-209ENST00000565511 TAF7Q15545 349 aaPredicted RBP31.55■■■□□ 2.64
RAB40C-209ENST00000565511 RNF181Q9P0P0 153 aa31.55■■■□□ 2.64
RAB40C-209ENST00000565511 CACNA1SQ13698 1873 aa31.55■■■□□ 2.64
RAB40C-209ENST00000565511 CCDC88AQ3V6T2 1871 aa31.55■■■□□ 2.64
RAB40C-209ENST00000565511 NFE2L2Q16236 605 aa31.52■■■□□ 2.64
RAB40C-209ENST00000565511 TTLL6Q8N841 843 aa31.52■■■□□ 2.64
RAB40C-209ENST00000565511 TIAM2Q8IVF5 1701 aa31.5■■■□□ 2.63
RAB40C-209ENST00000565511 H0YIN7 160 aa31.5■■■□□ 2.63
RAB40C-209ENST00000565511 SETDB2Q96T68 719 aa31.49■■■□□ 2.63
RAB40C-209ENST00000565511 BRIP1Q9BX63 1249 aa31.49■■■□□ 2.63
RAB40C-209ENST00000565511 SLX4Q8IY92 1834 aa31.48■■■□□ 2.63
RAB40C-209ENST00000565511 NFKBIEO00221 500 aa31.48■■■□□ 2.63
RAB40C-209ENST00000565511 FER1L6Q2WGJ9 1857 aa31.47■■■□□ 2.63
RAB40C-209ENST00000565511 HSPA6P17066 643 aa31.47■■■□□ 2.63
RAB40C-209ENST00000565511 DDX10Q13206 875 aaKnown RBP31.47■■■□□ 2.63
RAB40C-209ENST00000565511 CNBD1Q8NA66 436 aa31.47■■■□□ 2.63
RAB40C-209ENST00000565511 ARFGEF2Q9Y6D5 1785 aa31.47■■■□□ 2.63
RAB40C-209ENST00000565511 NPM2Q86SE8 214 aaKnown RBP31.46■■■□□ 2.63
RAB40C-209ENST00000565511 ZNF622Q969S3 477 aaKnown RBP eCLIP31.45■■■□□ 2.63
RAB40C-209ENST00000565511 TNRC6CQ9HCJ0 1690 aaKnown RBP31.44■■■□□ 2.62
RAB40C-209ENST00000565511 NEFMP07197 916 aa31.44■■■□□ 2.62
RAB40C-209ENST00000565511 EIF4A1P60842 406 aaKnown RBP31.44■■■□□ 2.62
RAB40C-209ENST00000565511 RALBP1Q15311 655 aa31.44■■■□□ 2.62
RAB40C-209ENST00000565511 ZNF219Q9P2Y4 722 aaPredicted RBP31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms