RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 A0A0G2JLW4 131 aa19.7■□□□□ 0.74
USB1-210ENST00000565151 GRIN3BO60391 1043 aa19.7■□□□□ 0.74
USB1-210ENST00000565151 FCHSD2O94868 740 aa19.7■□□□□ 0.74
USB1-210ENST00000565151 DCTN1Q14203 1278 aa19.7■□□□□ 0.74
USB1-210ENST00000565151 USPL1Q5W0Q7 1092 aa19.7■□□□□ 0.74
USB1-210ENST00000565151 MCM10Q7L590 875 aa19.7■□□□□ 0.74
USB1-210ENST00000565151 NUDCQ9Y266 331 aa19.7■□□□□ 0.74
USB1-210ENST00000565151 COL15A1P39059 1388 aa19.7■□□□□ 0.74
USB1-210ENST00000565151 KCNA3P22001 575 aa19.69■□□□□ 0.74
USB1-210ENST00000565151 TEFQ10587 303 aa19.69■□□□□ 0.74
USB1-210ENST00000565151 ANKRD31Q8N7Z5 1873 aa19.69■□□□□ 0.74
USB1-210ENST00000565151 SCN7AQ01118 1682 aa19.68■□□□□ 0.74
USB1-210ENST00000565151 KDM3BQ7LBC6 1761 aa19.68■□□□□ 0.74
USB1-210ENST00000565151 POLRMTO00411 1230 aaKnown RBP19.68■□□□□ 0.74
USB1-210ENST00000565151 PLEKHF1Q96S99 279 aa19.68■□□□□ 0.74
USB1-210ENST00000565151 DLEC1Q9Y238 1755 aa19.67■□□□□ 0.74
USB1-210ENST00000565151 PRAMEF22A3QJZ6 481 aa19.67■□□□□ 0.74
USB1-210ENST00000565151 DPEP1P16444 411 aa19.67■□□□□ 0.74
USB1-210ENST00000565151 CANXP27824 592 aaKnown RBP19.67■□□□□ 0.74
USB1-210ENST00000565151 EIF5P55010 431 aaKnown RBP19.67■□□□□ 0.74
USB1-210ENST00000565151 NARFQ9UHQ1 456 aa19.67■□□□□ 0.74
USB1-210ENST00000565151 PARP3Q9Y6F1 533 aa19.67■□□□□ 0.74
USB1-210ENST00000565151 BCORQ6W2J9 1755 aa19.67■□□□□ 0.74
USB1-210ENST00000565151 ADCY9O60503 1353 aa19.66■□□□□ 0.74
USB1-210ENST00000565151 SBF1O95248 1867 aa19.65■□□□□ 0.74
USB1-210ENST00000565151 BTBD11A6QL63 1104 aa19.65■□□□□ 0.74
USB1-210ENST00000565151 A1BGP04217 495 aa19.65■□□□□ 0.74
USB1-210ENST00000565151 TGFB2P61812 414 aa19.65■□□□□ 0.74
USB1-210ENST00000565151 DDX10Q13206 875 aaKnown RBP19.65■□□□□ 0.74
USB1-210ENST00000565151 NFIXQ14938 502 aa19.65■□□□□ 0.74
USB1-210ENST00000565151 TTC5Q8N0Z6 440 aa19.65■□□□□ 0.74
USB1-210ENST00000565151 USP16Q9Y5T5 823 aa19.63■□□□□ 0.73
USB1-210ENST00000565151 LAMB4A4D0S4 1761 aa19.62■□□□□ 0.73
USB1-210ENST00000565151 ATP10DQ9P241 1426 aa19.62■□□□□ 0.73
USB1-210ENST00000565151 ZPR1O75312 459 aa19.62■□□□□ 0.73
USB1-210ENST00000565151 PIP4K2AP48426 406 aaPredicted RBP19.62■□□□□ 0.73
USB1-210ENST00000565151 FMNL2Q96PY5 1086 aa19.62■□□□□ 0.73
USB1-210ENST00000565151 CCDC88AQ3V6T2 1871 aa19.61■□□□□ 0.73
USB1-210ENST00000565151 STARD3NLO95772 234 aa19.61■□□□□ 0.73
USB1-210ENST00000565151 CHRNA5P30532 468 aa19.61■□□□□ 0.73
USB1-210ENST00000565151 MIS18AQ9NYP9 233 aa19.61■□□□□ 0.73
USB1-210ENST00000565151 COL11A2P13942 1736 aaPredicted RBP19.61■□□□□ 0.73
USB1-210ENST00000565151 CARMIL3Q8ND23 1372 aa19.6■□□□□ 0.73
USB1-210ENST00000565151 THUMPD2Q9BTF0 503 aaKnown RBP19.6■□□□□ 0.73
USB1-210ENST00000565151 TBC1D2BQ9UPU7 963 aa19.6■□□□□ 0.73
USB1-210ENST00000565151 BCS1LQ9Y276 419 aa19.6■□□□□ 0.73
USB1-210ENST00000565151 HTATSF1O43719 755 aaKnown RBP19.59■□□□□ 0.73
USB1-210ENST00000565151 CACNA1SQ13698 1873 aa19.58■□□□□ 0.73
USB1-210ENST00000565151 TBC1D9BQ66K14 1250 aa19.58■□□□□ 0.72
USB1-210ENST00000565151 RTF1Q92541 710 aaKnown RBP19.58■□□□□ 0.72
USB1-210ENST00000565151 TEX13AQ9BXU3 409 aaPredicted RBP19.58■□□□□ 0.72
USB1-210ENST00000565151 NBPF26B4DH59 902 aa19.57■□□□□ 0.72
USB1-210ENST00000565151 SERPINB2P05120 415 aa19.57■□□□□ 0.72
USB1-210ENST00000565151 IL6STP40189 918 aaPredicted RBP19.57■□□□□ 0.72
USB1-210ENST00000565151 NBPF10Q6P3W6 841 aaKnown RBP19.57■□□□□ 0.72
USB1-210ENST00000565151 NBPF15Q8N660 670 aa19.57■□□□□ 0.72
USB1-210ENST00000565151 CAMTA2O94983 1202 aa19.56■□□□□ 0.72
USB1-210ENST00000565151 NFE2L2Q16236 605 aa19.56■□□□□ 0.72
USB1-210ENST00000565151 NUP98P52948 1817 aa19.55■□□□□ 0.72
USB1-210ENST00000565151 RALBP1Q15311 655 aa19.55■□□□□ 0.72
USB1-210ENST00000565151 TAF7Q15545 349 aaPredicted RBP19.55■□□□□ 0.72
USB1-210ENST00000565151 BICDL1Q6ZP65 573 aa19.55■□□□□ 0.72
USB1-210ENST00000565151 ZNF330Q9Y3S2 320 aaPredicted RBP19.55■□□□□ 0.72
USB1-210ENST00000565151 C1QTNF8P60827 252 aa19.54■□□□□ 0.72
USB1-210ENST00000565151 PIM2Q9P1W9 311 aa19.54■□□□□ 0.72
USB1-210ENST00000565151 A0A087WZG4 1122 aa19.53■□□□□ 0.72
USB1-210ENST00000565151 SNRPA1P09661 255 aaKnown RBP19.53■□□□□ 0.72
USB1-210ENST00000565151 CCDC24Q8N4L8 307 aa19.53■□□□□ 0.72
USB1-210ENST00000565151 ARHGAP27Q6ZUM4 889 aa19.52■□□□□ 0.72
USB1-210ENST00000565151 ZNF526Q8TF50 670 aaPredicted RBP19.52■□□□□ 0.72
USB1-210ENST00000565151 CEP350Q5VT06 3117 aa19.51■□□□□ 0.71
USB1-210ENST00000565151 SLX4Q8IY92 1834 aa19.51■□□□□ 0.71
USB1-210ENST00000565151 MYBBP1AQ9BQG0 1328 aaKnown RBP19.51■□□□□ 0.71
USB1-210ENST00000565151 ARFGEF2Q9Y6D5 1785 aa19.5■□□□□ 0.71
USB1-210ENST00000565151 DALRD3Q5D0E6 543 aaKnown RBP19.5■□□□□ 0.71
USB1-210ENST00000565151 DZIP3Q86Y13 1208 aaKnown RBP19.5■□□□□ 0.71
USB1-210ENST00000565151 FER1L6Q2WGJ9 1857 aa19.5■□□□□ 0.71
USB1-210ENST00000565151 GIGYF1O75420 1035 aaPredicted RBP19.49■□□□□ 0.71
USB1-210ENST00000565151 PRELPP51888 382 aa19.49■□□□□ 0.71
USB1-210ENST00000565151 EIF4A1P60842 406 aaKnown RBP19.49■□□□□ 0.71
USB1-210ENST00000565151 PRR5LQ6MZQ0 368 aa19.49■□□□□ 0.71
USB1-210ENST00000565151 TMPOP42166 694 aaKnown RBP19.47■□□□□ 0.71
USB1-210ENST00000565151 C2CD5Q86YS7 1000 aa19.47■□□□□ 0.71
USB1-210ENST00000565151 CCDC146Q8IYE0 955 aa19.47■□□□□ 0.71
USB1-210ENST00000565151 DICER1Q9UPY3 1922 aaKnown RBP19.47■□□□□ 0.71
USB1-210ENST00000565151 HLFQ16534 295 aa19.46■□□□□ 0.71
USB1-210ENST00000565151 GPBP1L1Q9HC44 474 aaPredicted RBP19.46■□□□□ 0.71
USB1-210ENST00000565151 RRP7AQ9Y3A4 280 aaKnown RBP19.46■□□□□ 0.71
USB1-210ENST00000565151 MAPK8IP3Q9UPT6 1336 aa19.46■□□□□ 0.71
USB1-210ENST00000565151 KIF3CO14782 793 aa19.45■□□□□ 0.7
USB1-210ENST00000565151 RIPK4P57078 832 aa19.45■□□□□ 0.7
USB1-210ENST00000565151 C9orf131Q5VYM1 1079 aa19.45■□□□□ 0.7
USB1-210ENST00000565151 PRKRIP1Q9H875 184 aaPredicted RBP19.45■□□□□ 0.7
USB1-210ENST00000565151 TNRC6CQ9HCJ0 1690 aaKnown RBP19.45■□□□□ 0.7
USB1-210ENST00000565151 NEFMP07197 916 aa19.44■□□□□ 0.7
USB1-210ENST00000565151 RASSF7Q02833 373 aa19.44■□□□□ 0.7
USB1-210ENST00000565151 SETDB2Q96T68 719 aa19.44■□□□□ 0.7
USB1-210ENST00000565151 BRIP1Q9BX63 1249 aa19.44■□□□□ 0.7
USB1-210ENST00000565151 TIAM2Q8IVF5 1701 aa19.44■□□□□ 0.7
USB1-210ENST00000565151 PNISRQ8TF01 805 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms